>ARFQ_ARATH (Q84WU6) Auxin response factor 17|
          Length = 585

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = -1

Query: 227 CTIVSDLP--VFPLPVYFLSCSLLFSPMVS*LSDHLILQPY-MGNFSPISF 84
           C ++S LP    P+P    S  LL  P+   +  HLILQP     F+P ++
Sbjct: 50  CPLLSTLPSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNY 100

>POMT1_DROME (Q9VTK2) Protein O-mannosyltransferase 1 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           1) (dPOMT1) (Protein rotated abdomen)
          Length = 886

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
 Frame = +1

Query: 163 KREQERK*TGSGKTGKSLTIVHF-SLSQNSLTHYTAI-NGPS 282
           +++Q+ + TGS  +G+S   +HF S S NS+  +TAI N PS
Sbjct: 19  RQQQQHQWTGSDLSGESNERLHFRSRSTNSMQQHTAISNSPS 60

>LRC56_RAT (Q4V8C9) Leucine-rich repeat-containing protein 56|
          Length = 548

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 16/40 (40%), Positives = 17/40 (42%)
 Frame = -3

Query: 387 DGQQGGRSEVRDTRRCPYDWAGLRNFQPRP*VWSSRGPIY 268
           DG QG R      R     W GL N QP+     S G IY
Sbjct: 6   DGSQGSRPGTASIRVRELSWQGLNNPQPQNKRLGSHGDIY 45

>CD63_MOUSE (P41731) CD63 antigen|
          Length = 237

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 258 LHSNKWALCLTKLKAEAENCAAQPNHTDTSGYPGL 362
           L  NK A  L KL+ E  NC    N+TD    PG+
Sbjct: 126 LKDNKTATILDKLQKE-NNCCGASNYTDWENIPGM 159

>AMP2A_ARATH (Q9FV49) Methionine aminopeptidase 2A (EC 3.4.11.18) (MetAP 2A)|
           (MAP 2A) (Peptidase M 2A)
          Length = 441

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 122 ISNDLTVNSPLGKIKENKKGNKQEAE 199
           +S+DLT +  L ++KE++K N QE E
Sbjct: 28  LSSDLTKSLDLAEVKEDEKDNNQEEE 53

>ACE2_SCHPO (O14258) Metallothionein expression activator|
          Length = 533

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 223 VHFSLSQNSLTHYTAINGPSA*PNLRPRLKIAQPSPIIRTPPGIPDF 363
           ++F +SQ S  H   ++ P   PN+ P    AQ   +  T P  P F
Sbjct: 248 LNFQISQPSPAHPVDLSSPETAPNISPVSPFAQLVKLEPTSPQKPSF 294

>TFF1_CANFA (Q863T4) Trefoil factor 1 precursor|
          Length = 81

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 276 ALCLTKL-KAEAENCAAQPNHTDTSGYPGLLISLPADR 386
           AL L+ L + + E C   P+H D  G PG+  S   D+
Sbjct: 14  ALTLSSLAQGQQETCTVAPHHRDNCGSPGITPSQCKDK 51

>RSE1_CANAL (Q5A7S5) Pre-mRNA-splicing factor RSE1|
          Length = 1219

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
 Frame = +2

Query: 74  PKNERKWGRNFPCK-VAISND--------LTVNSPLGKIKENKKGNKQEAERLASHSL*Y 226
           P  +  WGRN+  + +AI  +        +  N    KI+ N  G+K+ +  L +HS   
Sbjct: 148 PMTKNGWGRNYVGENLAIDPENRCILVAAMEKNKLFYKIESNSSGSKELSSPLEAHS--K 205

Query: 227 TFPCLKIHSLTT 262
              CLKI +L T
Sbjct: 206 QVLCLKIVALNT 217

>L_EBOZM (Q05318) Large structural protein (L protein) (Transcriptase)|
            (Replicase) [Includes: RNA-directed RNA polymerase (EC
            2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC
            2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)]
          Length = 2212

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 219  YSTLFLVSKFTHSLHSNKWALCLTKLKAEAENCAAQPNH 335
            ++T +L+   T S  S++W LCLT   +       Q NH
Sbjct: 1982 FATGYLIKPITSSARSSEWYLCLTNFLSTTRKMPHQ-NH 2019

>TAF4B_HUMAN (Q92750) Transcription initiation factor TFIID 105 kDa subunit|
           (TAFII-105) (TAFII105) (Fragment)
          Length = 801

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +1

Query: 304 RLKIAQPSPIIRTPPGIP 357
           ++K+AQP P++  P GIP
Sbjct: 439 QIKLAQPGPVLSQPAGIP 456

>WNK1_HUMAN (Q9H4A3) Serine/threonine-protein kinase WNK1 (EC 2.7.11.1)|
           (Protein kinase with no lysine 1) (Protein kinase,
           lysine-deficient 1) (Kinase deficient protein)
          Length = 2382

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
 Frame = +1

Query: 190 GSGKTGKSLTIVHFSLSQNSL----THYTAINGPSA*PNLRPR------LKIAQPSPIIR 339
           G  +T      V +SLSQ S     T    ++ P A P + P+      L ++QP P I+
Sbjct: 744 GIQQTAPPQQTVQYSLSQTSTSSEATTAQPVSQPQA-PQVLPQVSAGKQLPVSQPVPTIQ 802

Query: 340 TPPGIPDF*SPSLLTV 387
             P IP    PS++ V
Sbjct: 803 GEPQIPVATQPSVVPV 818


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,778,169
Number of Sequences: 219361
Number of extensions: 1378402
Number of successful extensions: 3235
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3234
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)