ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet117e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC092577.3| Homo sapiens BAC clone RP11-12E5 from 4, complete... 44 0.35
2emb|CR753897.9| Zebrafish DNA sequence from clone CH211-219A15 i... 44 0.35
3gb|AY737252.1| Saccharomyces kudriavzevii strain NCYC 2889 putat... 42 1.4
4emb|AL512598.11| Human DNA sequence from clone RP11-165A20 on ch... 42 1.4
5emb|CR860814.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2014 (from cl... 42 1.4
6gb|AC149374.2| Phakopsora pachyrhizi clone JGIAFNA-5A11, complet... 42 1.4
7dbj|AK124767.1| Homo sapiens cDNA FLJ42777 fis, clone BRAWH3005132 42 1.4
8gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 42 1.4
9gb|AC127467.3| Atelerix albiventris clone LB4-4E15, complete seq... 42 1.4
10gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chr... 42 1.4
11gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, com... 42 1.4
12gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. F... 42 1.4
13emb|AL773550.4| Mouse DNA sequence from clone RP23-433P3 on chro... 42 1.4
14gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, co... 40 5.4
15gb|AF091512.1| Homo sapiens familial mediterranean fever locus g... 40 5.4
16gb|DP000012.1| Macropus eugenii target 1 genomic scaffold 40 5.4
17gb|AC159624.2| Mus musculus BAC clone RP24-270G2 from chromosome... 40 5.4
18gb|AC003119.1|HUAC003119 Human Chromosome 16 BAC clone CIT987SK-... 40 5.4
19gb|AC116468.13| Mus musculus chromosome 16, clone RP23-166G21, c... 40 5.4
20gb|AC155929.6| Mus musculus BAC clone RP24-75H6 from chromosome ... 40 5.4
21emb|AL592079.5| Human DNA sequence from clone RP11-96P22 on chro... 40 5.4
22emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chr... 40 5.4
23emb|AL357512.15| Human DNA sequence from clone RP11-541J2 on chr... 40 5.4
24emb|AL356477.12| Human DNA sequence from clone RP11-470P23 on ch... 40 5.4
25emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chr... 40 5.4
26gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, co... 40 5.4
27emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chro... 40 5.4
28gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, compl... 40 5.4
29gb|AC157351.11| Mus musculus chromosome 5, clone RP23-219K16, co... 40 5.4
30gb|AC099509.2| Homo sapiens chromosome 5 clone RP11-254I22, comp... 40 5.4
31gb|AC011358.7| Homo sapiens chromosome 5 clone CTC-367D15, compl... 40 5.4
32gb|AC104123.2| Homo sapiens chromosome 5 clone RP11-417I14, comp... 40 5.4
33gb|AC022426.5| Homo sapiens chromosome 5 clone CTD-2315O11, comp... 40 5.4
34gb|AC068050.6| Homo sapiens BAC clone RP11-240E2 from 9, complet... 40 5.4
35gb|AC153141.7| Mus musculus BAC clone RP23-268A17 from chromosom... 40 5.4
36gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.4
37gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.4
38dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
39gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, com... 40 5.4
40gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, com... 40 5.4
41gb|AC022440.7| Homo sapiens chromosome 5 clone RP11-20O22, compl... 40 5.4
42gb|AC004147.2| Homo sapiens chromosome 17, clone CTC-304I17, com... 40 5.4
43dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
44gb|AC145407.3| Macropus eugenii clone ME_KBa-169G7, complete seq... 40 5.4
45gb|AC144690.3| Didelphis virginiana clone LB3-234D12, complete s... 40 5.4
46gb|AC005873.3|AC005873 citb_15_o_21, complete sequence 40 5.4
47dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
48gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.21... 40 5.4
49gb|AF070718.1|AF070718 Homo sapiens BAC clone 529F11 from 8q21, ... 40 5.4
50emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence ... 40 5.4
51gb|AC158116.2| Gallus gallus BAC clone CH261-122G21 from chromos... 40 5.4
52gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 5.4
53dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC c... 40 5.4 
>gb|AC092577.3| Homo sapiens BAC clone RP11-12E5 from 4, complete sequence
          Length = 73928

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 7     caatgtaaaatacccatatcatgtaaaaat 36
             ||||||| |||||| |||||||||||||||
Sbjct: 57243 caatgtataatacctatatcatgtaaaaat 57214
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>emb|CR753897.9| Zebrafish DNA sequence from clone CH211-219A15 in linkage group 18,
             complete sequence
          Length = 124389

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 169   gaacaagaaaggaaataaacag 190
             ||||||||||||||||||||||
Sbjct: 25247 gaacaagaaaggaaataaacag 25268
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>gb|AY737252.1| Saccharomyces kudriavzevii strain NCYC 2889 putative telomerase RNA
            gene, complete sequence
          Length = 2228

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 163  aaaagagaacaagaaaggaaa 183
            |||||||||||||||||||||
Sbjct: 1279 aaaagagaacaagaaaggaaa 1299
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>emb|AL512598.11| Human DNA sequence from clone RP11-165A20 on chromosome 10 Contains the
             5' end of the gene for HHGP protein (HHGP) (FLJ11888), the
             gene for a novel protein similar to secreted
             frizzled-related protein 4 SFRP4 (FLJ37702), the gene for
             a novel protein similar to threonine synthase, containing
             FLJ2202 and  FLJ37043 and two CpG islands, complete
             sequence
          Length = 139491

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    aaatgaaaggaaatgggggag 99
             |||||||||||||||||||||
Sbjct: 76090 aaatgaaaggaaatgggggag 76070
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>emb|CR860814.1| Pongo pygmaeus mRNA; cDNA DKFZp469P2014 (from clone DKFZp469P2014)
          Length = 3827

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 79  aaatgaaaggaaatgggggag 99
           |||||||||||||||||||||
Sbjct: 121 aaatgaaaggaaatgggggag 101
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>gb|AC149374.2| Phakopsora pachyrhizi clone JGIAFNA-5A11, complete sequence
          Length = 35737

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 166   agagaacaagaaaggaaataa 186
             |||||||||||||||||||||
Sbjct: 19575 agagaacaagaaaggaaataa 19555



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 166  agagaacaagaaaggaaataa 186
            |||||||||||||||||||||
Sbjct: 3811 agagaacaagaaaggaaataa 3791
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>dbj|AK124767.1| Homo sapiens cDNA FLJ42777 fis, clone BRAWH3005132
          Length = 3708

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 79  aaatgaaaggaaatgggggag 99
           |||||||||||||||||||||
Sbjct: 217 aaatgaaaggaaatgggggag 237
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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 173     aagaaaggaaataaacaggaa 193
               |||||||||||||||||||||
Sbjct: 1476131 aagaaaggaaataaacaggaa 1476151
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>gb|AC127467.3| Atelerix albiventris clone LB4-4E15, complete sequence
          Length = 139228

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   aagaaaggaaataaacaggaa 193
             |||||||||||||||||||||
Sbjct: 56844 aagaaaggaaataaacaggaa 56864
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>gb|AE010301.1| Leptospira interrogans serovar Lai str. 56601 chromosome II, complete
              sequence
          Length = 358943

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 219    tatagtacacttttccttgtctcaaaatt 247
              |||| |||| |||||||||||||||||||
Sbjct: 297982 tatattacatttttccttgtctcaaaatt 297954
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>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence
          Length = 105308

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 165   aagagaacaagaaaggaaata 185
             |||||||||||||||||||||
Sbjct: 12168 aagagaacaagaaaggaaata 12188
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>gb|AE016824.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome II, complete sequence
          Length = 350181

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 219    tatagtacacttttccttgtctcaaaatt 247
              |||| |||| |||||||||||||||||||
Sbjct: 292335 tatattacatttttccttgtctcaaaatt 292307
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>emb|AL773550.4| Mouse DNA sequence from clone RP23-433P3 on chromosome 4, complete
             sequence
          Length = 142900

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 251   tcactcactacacagcaataaatgg 275
             |||||||||||| ||||||||||||
Sbjct: 46006 tcactcactacagagcaataaatgg 46030
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>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence
          Length = 154206

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  aatatcaaatgatctgacag 140
            ||||||||||||||||||||
Sbjct: 8775 aatatcaaatgatctgacag 8794
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>gb|AF091512.1| Homo sapiens familial mediterranean fever locus genomic sequence
          Length = 87258

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   ggaaaataaaagagaacaagaaag 179
             |||||||||||||||| |||||||
Sbjct: 24849 ggaaaataaaagagaaaaagaaag 24826
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>gb|DP000012.1| Macropus eugenii target 1 genomic scaffold
          Length = 1996640

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 159    aaataaaagagaacaagaaaggaa 182
              ||||||||||||| ||||||||||
Sbjct: 146707 aaataaaagagaaaaagaaaggaa 146730
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>gb|AC159624.2| Mus musculus BAC clone RP24-270G2 from chromosome 12, complete sequence
          Length = 187364

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    aaagagaacaagaaaggaaataaa 187
              ||||| ||||||||||||||||||
Sbjct: 123764 aaagaaaacaagaaaggaaataaa 123741
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>gb|AC003119.1|HUAC003119 Human Chromosome 16 BAC clone CIT987SK-27D10, complete sequence
          Length = 88036

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   caatatcaaatgatctgaca 139
             ||||||||||||||||||||
Sbjct: 40682 caatatcaaatgatctgaca 40701
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>gb|AC116468.13| Mus musculus chromosome 16, clone RP23-166G21, complete sequence
          Length = 193206

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     gaaaggaaatgggggagaaa 102
              ||||||||||||||||||||
Sbjct: 152570 gaaaggaaatgggggagaaa 152551
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>gb|AC155929.6| Mus musculus BAC clone RP24-75H6 from chromosome 10, complete
            sequence
          Length = 191193

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  aaaagagaacaagaaaggaa 182
            ||||||||||||||||||||
Sbjct: 6760 aaaagagaacaagaaaggaa 6741
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>emb|AL592079.5| Human DNA sequence from clone RP11-96P22 on chromosome 6, complete
             sequence
          Length = 77047

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aaaataaaagagaacaagaa 177
             ||||||||||||||||||||
Sbjct: 72687 aaaataaaagagaacaagaa 72668
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>emb|AL392087.7| Human DNA sequence from clone RP11-454H24 on chromosome 10 Contains part
              of a novel gene (KIAA0534), complete sequence
          Length = 193980

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    aaagagaacaagaaaggaaa 183
              ||||||||||||||||||||
Sbjct: 133277 aaagagaacaagaaaggaaa 133258
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>emb|AL357512.15| Human DNA sequence from clone RP11-541J2 on chromosome 1 Contains a
            nicotinamide nucleotide adenylyltransferase 1 (NMNAT1)
            pseudogene and a high-mobility group box 3 (HMGB3)
            pseudogene, complete sequence
          Length = 184024

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 168  agaacaagaaaggaaataaa 187
            ||||||||||||||||||||
Sbjct: 4924 agaacaagaaaggaaataaa 4943
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>emb|AL356477.12| Human DNA sequence from clone RP11-470P23 on chromosome 10, complete
             sequence
          Length = 29021

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    aaatgggggagaaatttccc 108
             ||||||||||||||||||||
Sbjct: 19112 aaatgggggagaaatttccc 19093
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>emb|AL157778.9| Human DNA sequence from clone RP11-485F13 on chromosome Xq21.2-22.2,
             complete sequence
          Length = 140757

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 151   attggggaaaataaaagagaacaagaaaggaa 182
             ||||| ||||||||||||||| ||| ||||||
Sbjct: 84492 attggagaaaataaaagagaaaaaggaaggaa 84461
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>gb|AC158565.2| Mus musculus chromosome 15, clone RP24-354O12, complete sequence
          Length = 150125

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aatatcaaatgatctgacag 140
             ||||||||||||||||||||
Sbjct: 51499 aatatcaaatgatctgacag 51480
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>emb|AL805944.8| Mouse DNA sequence from clone RP24-387A5 on chromosome 4 Contains a novel
              pseudogene, complete sequence
          Length = 195873

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    cactcactcactacacagca 267
              ||||||||||||||||||||
Sbjct: 167632 cactcactcactacacagca 167651
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>gb|AC103749.2| Homo sapiens chromosome 15, clone RP11-4F5, complete sequence
          Length = 190678

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 260   acacagcaataaatgggccctctgcttg 287
             ||||||||||||| |||||||| |||||
Sbjct: 81087 acacagcaataaaagggccctccgcttg 81114
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>gb|AC157351.11| Mus musculus chromosome 5, clone RP23-219K16, complete sequence
          Length = 196331

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 9     atgtaaaatacccatatcatgtaaaaat 36
             ||||| |||||| |||||||||||||||
Sbjct: 94208 atgtataatacctatatcatgtaaaaat 94181
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>gb|AC099509.2| Homo sapiens chromosome 5 clone RP11-254I22, complete sequence
          Length = 145514

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   catattaattacacactctc 68
            ||||||||||||||||||||
Sbjct: 2734 catattaattacacactctc 2753
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>gb|AC011358.7| Homo sapiens chromosome 5 clone CTC-367D15, complete sequence
          Length = 201251

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    gaaaggaaatgggggagaaa 102
             ||||||||||||||||||||
Sbjct: 95073 gaaaggaaatgggggagaaa 95092
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>gb|AC104123.2| Homo sapiens chromosome 5 clone RP11-417I14, complete sequence
          Length = 129296

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    catattaattacacactctc 68
             ||||||||||||||||||||
Sbjct: 13932 catattaattacacactctc 13913
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>gb|AC022426.5| Homo sapiens chromosome 5 clone CTD-2315O11, complete sequence
          Length = 110833

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   gaaaggaaatgggggagaaa 102
            ||||||||||||||||||||
Sbjct: 3219 gaaaggaaatgggggagaaa 3200
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>gb|AC068050.6| Homo sapiens BAC clone RP11-240E2 from 9, complete sequence
          Length = 152747

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 153    tggggaaaataaaagagaacaaga 176
              |||||||| |||||||||||||||
Sbjct: 149090 tggggaaattaaaagagaacaaga 149113
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>gb|AC153141.7| Mus musculus BAC clone RP23-268A17 from chromosome 10, complete sequence
          Length = 221824

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    aaaagagaacaagaaaggaa 182
              ||||||||||||||||||||
Sbjct: 138608 aaaagagaacaagaaaggaa 138589
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>gb|AC148663.1| Macaca mulatta Major Histocompatibility Complex BAC MMU012K22, complete
              sequence
          Length = 174897

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 269    taaatgggccctctgcttgaccaa 292
              ||||||||||||||||||| ||||
Sbjct: 165141 taaatgggccctctgcttggccaa 165164
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>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete
              sequence
          Length = 215614

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 269    taaatgggccctctgcttgaccaa 292
              ||||||||||||||||||| ||||
Sbjct: 116489 taaatgggccctctgcttggccaa 116512
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 163    aaaagagaacaagaaaggaaataa 186
              ||||||||| ||||||||||||||
Sbjct: 468501 aaaagagaaaaagaaaggaaataa 468478
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>gb|AC117832.6| Homo sapiens chromosome 15, clone RP11-963M5, complete sequence
          Length = 171462

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 260   acacagcaataaatgggccctctgcttg 287
             ||||||||||||| |||||||| |||||
Sbjct: 32934 acacagcaataaaagggccctccgcttg 32907
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>gb|AC108134.3| Homo sapiens chromosome 16 clone RP11-473M20, complete sequence
          Length = 180354

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    ggaaaataaaagagaacaagaaag 179
              |||||||||||||||| |||||||
Sbjct: 171118 ggaaaataaaagagaaaaagaaag 171095
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>gb|AC022440.7| Homo sapiens chromosome 5 clone RP11-20O22, complete sequence
          Length = 117353

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gaaaggaaatgggggagaaa 102
             ||||||||||||||||||||
Sbjct: 69987 gaaaggaaatgggggagaaa 69968
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>gb|AC004147.2| Homo sapiens chromosome 17, clone CTC-304I17, complete sequence
          Length = 139076

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 155  gggaaaataaaagagaacaagaaa 178
            ||||||||||||||||| ||||||
Sbjct: 1390 gggaaaataaaagagaaaaagaaa 1413
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>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 163   aaaagagaacaagaaaggaaataa 186
             ||||||||| ||||||||||||||
Sbjct: 70665 aaaagagaaaaagaaaggaaataa 70642
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>gb|AC145407.3| Macropus eugenii clone ME_KBa-169G7, complete sequence
          Length = 129708

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 159   aaataaaagagaacaagaaaggaa 182
             ||||||||||||| ||||||||||
Sbjct: 12402 aaataaaagagaaaaagaaaggaa 12425
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>gb|AC144690.3| Didelphis virginiana clone LB3-234D12, complete sequence
          Length = 164830

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aaagagaacaagaaaggaaa 183
             ||||||||||||||||||||
Sbjct: 16182 aaagagaacaagaaaggaaa 16163
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>gb|AC005873.3|AC005873 citb_15_o_21, complete sequence
          Length = 195653

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 164    aaagagaacaagaaaggaaa 183
              ||||||||||||||||||||
Sbjct: 181718 aaagagaacaagaaaggaaa 181737
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>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1567_G09
          Length = 121388

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 163   aaaagagaacaagaaaggaaataa 186
             ||||||||| ||||||||||||||
Sbjct: 22413 aaaagagaaaaagaaaggaaataa 22390
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>gb|AC005549.1|AC005549 Homo sapiens chromosome 17, clone hRPK.215_E_13, complete sequence
          Length = 147416

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 155    gggaaaataaaagagaacaagaaa 178
              ||||||||||||||||| ||||||
Sbjct: 146806 gggaaaataaaagagaaaaagaaa 146829
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>gb|AF070718.1|AF070718 Homo sapiens BAC clone 529F11 from 8q21, complete sequence
          Length = 166832

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 163    aaaagagaacaagaaaggaaataa 186
              |||||||||||||| |||||||||
Sbjct: 153564 aaaagagaacaagagaggaaataa 153587
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>emb|AJ003147.1|HSAJ03147 Homo sapiens complete genomic sequence between D16S3070 and D16S3275,
              containing Familial Mediterranean Fever gene disease
          Length = 239566

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    ggaaaataaaagagaacaagaaag 179
              |||||||||||||||| |||||||
Sbjct: 118825 ggaaaataaaagagaaaaagaaag 118802
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>gb|AC158116.2| Gallus gallus BAC clone CH261-122G21 from chromosome unknown, complete
              sequence
          Length = 213772

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 163    aaaagagaacaagaaaggaaataaacag 190
              |||||||||||||||| |||| ||||||
Sbjct: 105741 aaaagagaacaagaaatgaaaaaaacag 105714
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    aaagagaacaagaaaggaaa 183
              ||||||||||||||||||||
Sbjct: 428631 aaagagaacaagaaaggaaa 428612
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>dbj|AB015752.1| Homo sapiens genomic DNA, chromosome 8q21, BAC clone 521F14, complete
            sequence
          Length = 116160

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 163  aaaagagaacaagaaaggaaataa 186
            |||||||||||||| |||||||||
Sbjct: 9498 aaaagagaacaagagaggaaataa 9521


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,426,319
Number of Sequences: 3902068
Number of extensions: 5426319
Number of successful extensions: 136802
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136604
Number of HSP's gapped (non-prelim): 198
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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