ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet117d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OAS2_HUMAN (P29728) 2'-5'-oligoadenylate synthetase 2 (EC 2.7.7.... 28 6.9
2ARS2_CAEEL (Q966L5) Arsenite-resistance protein 2 homolog 28 6.9
3UL88_HHV7J (P52364) Protein U59 27 9.0

>OAS2_HUMAN (P29728) 2'-5'-oligoadenylate synthetase 2 (EC 2.7.7.-)|
           ((2-5')oligo(A) synthetase 2) (2-5A synthetase 2) (p69
           OAS / p71 OAS) (p69OAS / p71OAS)
          Length = 726

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -1

Query: 79  HNSIWNYCPWKNDTNKVMGQIHVQI 5
           HNS+ +Y   KN+ +K++ +IH Q+
Sbjct: 414 HNSLKSYTSQKNERHKIVKEIHEQL 438



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>ARS2_CAEEL (Q966L5) Arsenite-resistance protein 2 homolog|
          Length = 712

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 345 QRPHNEHAGDGAGERGG 295
           Q P ++H G G GERGG
Sbjct: 629 QAPRDDHRGGGGGERGG 645



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>UL88_HHV7J (P52364) Protein U59|
          Length = 347

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = -3

Query: 215 CYLQSEVFSMQTVRPEVVHYNSTMHIKVQA 126
           C L + ++S +T+ PE+V    ++H+ V+A
Sbjct: 257 CTLLNSIYSYKTLLPEIVDNTRSIHVVVKA 286


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,758,871
Number of Sequences: 219361
Number of extensions: 401512
Number of successful extensions: 871
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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