ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet117d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ004857.1|HVAJ4857 Hordeum vulgare mRNA for hypothetical pr... 728 0.0
2gb|AY805122.1| Zea mays clone 5Zm6R25 putative protein kinase-li... 178 9e-42
3ref|NM_189334.1| Oryza sativa (japonica cultivar-group), predic... 145 1e-31
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
5dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
6dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
7dbj|AK107370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
8ref|XM_800357.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.34
9ref|XM_807986.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.34
10emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on ch... 44 0.34
11gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.3
12ref|XM_473044.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
13emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.3
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
15gb|AC097470.3| Homo sapiens BAC clone RP11-65E19 from 4, complet... 42 1.3
16dbj|AK107880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
17emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
18gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 5.3
19gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, co... 40 5.3
20gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosom... 40 5.3
21gb|AY157498.1| Synechococcus sp. PCC 7942 cosmid 4G8, complete s... 40 5.3
22emb|AJ005522.1|HAA005522 Hippopotamus amphibius gene for pancrea... 40 5.3
23dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 5.3
24gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromo... 40 5.3
25gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, comp... 40 5.3
26gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, comp... 40 5.3
27dbj|AK050511.1| Mus musculus adult pancreas islet cells cDNA, RI... 40 5.3
28gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 5.3
29gb|AC157482.2| Pan troglodytes BAC clone CH251-366D6 from chromo... 40 5.3
30gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.3
31gb|AC004511.1|AC004511 Homo sapiens chromosome 5, P1 clone 792C1... 40 5.3
32gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 5.3 
>emb|AJ004857.1|HVAJ4857 Hordeum vulgare mRNA for hypothetical protein
          Length = 1225

 Score =  728 bits (367), Expect = 0.0
 Identities = 386/394 (97%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttggaatttgtacatgtatttgtcccataactttattcgtgtcatttttccaaggacagt 60
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 ttggaatttgtacatgtatatgtcccataactttattcgtgtcatttttccaaggacagt 1076

                                                                        
Query: 61   aattccatatgctattatgtacgtataatactagtgttcaggagtcgtcagttcctggta 120
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1075 aattccatatgctattatgtacgtataatactagtgttcaggagtcatcagttcctggta 1016

                                                                        
Query: 121  ggcttggcctgcaccttgatgtgcatggtggagttgtagtgcaccacctcgggccgcacc 180
              |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1015 nacttggcctgcaccttgatgtgcatggtgganttgtagtgcaccacctcgggccgcacc 956

                                                                        
Query: 181  gtctgcatcgagaacacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccg 240
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  gtctgcatcganaacacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccg 896

                                                                        
Query: 241  tagtaaaactgcgccgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  tagtaaaactgcgccgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcc 836

                                                                        
Query: 301  tcgctcacccgctccatcgcccgcatgctcgttgtgtggtcgttgaagtacgccgtgctc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  tcgctcacccgctccatcgcccgcatgctcgttgtgtggtcgttgaagtacgccgtgctc 776

                                              
Query: 361  gccagcgacaccagccggtgctgcgcgcgcggcc 394
            ||||||||||| | ||||||||||||||||||||
Sbjct: 775  gccagcgacacnanccggtgctgcgcgcgcggcc 742



 Score =  115 bits (58), Expect = 1e-22
 Identities = 68/70 (97%), Gaps = 1/70 (1%)
 Strand = Plus / Minus

                                                                        
Query: 22   gtcccataactttattcgtgtcatttttccaagg-acagtaattccatatgctattatgt 80
            |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1205 gtcccataacttcattcgtgtcatttttccaagggacagtaattccatatgctattatgt 1146

                      
Query: 81   acgtataata 90
            ||||||||||
Sbjct: 1145 acgtataata 1136
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>gb|AY805122.1| Zea mays clone 5Zm6R25 putative protein kinase-like protein mRNA,
           partial cds
          Length = 239

 Score =  178 bits (90), Expect = 9e-42
 Identities = 171/198 (86%)
 Strand = Plus / Minus

                                                                       
Query: 125 tggcctgcaccttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtct 184
           ||||| |||||||||  ||||||||||||||||||||||||||||| ||| ||  |||||
Sbjct: 198 tggcccgcaccttgagatgcatggtggagttgtagtgcaccacctccggctgcgacgtct 139

                                                                       
Query: 185 gcatcgagaacacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccgtagt 244
            || ||| | |||||||||||||||||||||| | || ||||||||||||  ||||||| 
Sbjct: 138 ccagcgacagcacctccgactgcaggtagcagaagccatcgccggcgtcggtgccgtaga 79

                                                                       
Query: 245 aaaactgcgccgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcctcgc 304
             ||||||||||||||||| ||||||||||||||||||||| || |||||||  | ||||
Sbjct: 78  cgaactgcgccgccgcgcaggcgcagtcgtccaggcacgccttcctgcacgcggcgtcgc 19

                             
Query: 305 tcacccgctccatcgccc 322
           |||||| ||||| |||||
Sbjct: 18  tcaccctctccagcgccc 1
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>ref|NM_189334.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1410

 Score =  145 bits (73), Expect = 1e-31
 Identities = 213/257 (82%), Gaps = 2/257 (0%)
 Strand = Plus / Minus

                                                                        
Query: 135  cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 194
            |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 1359 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 1300

                                                                        
Query: 195  cacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccgtagtaaaactgcgc 254
            |||||||||||||||||||||| | ||||||  || ||||   |||||    ||||||||
Sbjct: 1299 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 1240

                                                                        
Query: 255  cgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcctcgctcacccgctc 314
            ||||  ||||||||||||| ||| ||||||   |||||||||| |||||| ||||| |||
Sbjct: 1239 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 1180

                                                                        
Query: 315  catcgcccgcatgctcgttgtgtggtcgttgaagtacgccgtgctcgc-cagcgacacca 373
            || || ||||||||| ||   ||||  ||||||||| |||||| |||| |||||||||||
Sbjct: 1179 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtg-tcgcgcagcgacacca 1121

                             
Query: 374  gccggtgctgcgcgcgc 390
            |||||||| ||||||||
Sbjct: 1120 gccggtgccgcgcgcgc 1104
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  145 bits (73), Expect = 1e-31
 Identities = 213/257 (82%), Gaps = 2/257 (0%)
 Strand = Plus / Minus

                                                                            
Query: 135      cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 194
                |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 42232582 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 42232523

                                                                            
Query: 195      cacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccgtagtaaaactgcgc 254
                |||||||||||||||||||||| | ||||||  || ||||   |||||    ||||||||
Sbjct: 42232522 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 42232463

                                                                            
Query: 255      cgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcctcgctcacccgctc 314
                ||||  ||||||||||||| ||| ||||||   |||||||||| |||||| ||||| |||
Sbjct: 42232462 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 42232403

                                                                            
Query: 315      catcgcccgcatgctcgttgtgtggtcgttgaagtacgccgtgctcgc-cagcgacacca 373
                || || ||||||||| ||   ||||  ||||||||| |||||| |||| |||||||||||
Sbjct: 42232402 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtg-tcgcgcagcgacacca 42232344

                                 
Query: 374      gccggtgctgcgcgcgc 390
                |||||||| ||||||||
Sbjct: 42232343 gccggtgccgcgcgcgc 42232327
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>dbj|AP003238.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0401G10
          Length = 160704

 Score =  145 bits (73), Expect = 1e-31
 Identities = 213/257 (82%), Gaps = 2/257 (0%)
 Strand = Plus / Minus

                                                                        
Query: 135  cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 194
            |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 4539 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 4480

                                                                        
Query: 195  cacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccgtagtaaaactgcgc 254
            |||||||||||||||||||||| | ||||||  || ||||   |||||    ||||||||
Sbjct: 4479 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 4420

                                                                        
Query: 255  cgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcctcgctcacccgctc 314
            ||||  ||||||||||||| ||| ||||||   |||||||||| |||||| ||||| |||
Sbjct: 4419 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 4360

                                                                        
Query: 315  catcgcccgcatgctcgttgtgtggtcgttgaagtacgccgtgctcgc-cagcgacacca 373
            || || ||||||||| ||   ||||  ||||||||| |||||| |||| |||||||||||
Sbjct: 4359 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtg-tcgcgcagcgacacca 4301

                             
Query: 374  gccggtgctgcgcgcgc 390
            |||||||| ||||||||
Sbjct: 4300 gccggtgccgcgcgcgc 4284
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>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1294_F06
          Length = 121088

 Score =  145 bits (73), Expect = 1e-31
 Identities = 213/257 (82%), Gaps = 2/257 (0%)
 Strand = Plus / Minus

                                                                          
Query: 135    cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 194
              |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 105780 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 105721

                                                                          
Query: 195    cacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccgtagtaaaactgcgc 254
              |||||||||||||||||||||| | ||||||  || ||||   |||||    ||||||||
Sbjct: 105720 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 105661

                                                                          
Query: 255    cgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcctcgctcacccgctc 314
              ||||  ||||||||||||| ||| ||||||   |||||||||| |||||| ||||| |||
Sbjct: 105660 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 105601

                                                                          
Query: 315    catcgcccgcatgctcgttgtgtggtcgttgaagtacgccgtgctcgc-cagcgacacca 373
              || || ||||||||| ||   ||||  ||||||||| |||||| |||| |||||||||||
Sbjct: 105600 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtg-tcgcgcagcgacacca 105542

                               
Query: 374    gccggtgctgcgcgcgc 390
              |||||||| ||||||||
Sbjct: 105541 gccggtgccgcgcgcgc 105525
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>dbj|AK107370.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B03, full
            insert sequence
          Length = 1610

 Score =  145 bits (73), Expect = 1e-31
 Identities = 213/257 (82%), Gaps = 2/257 (0%)
 Strand = Plus / Minus

                                                                        
Query: 135  cttgatgtgcatggtggagttgtagtgcaccacctcgggccgcaccgtctgcatcgagaa 194
            |||||| ||||||| |||||||||||| | |||||| ||| ||| ||||| || ||| ||
Sbjct: 1414 cttgatatgcatggaggagttgtagtgaaacacctccggctgcatcgtctccagcgacaa 1355

                                                                        
Query: 195  cacctccgactgcaggtagcaggacccgtcgccggcgtcgcggccgtagtaaaactgcgc 254
            |||||||||||||||||||||| | ||||||  || ||||   |||||    ||||||||
Sbjct: 1354 cacctccgactgcaggtagcagaagccgtcgttggggtcgaatccgtacacgaactgcgc 1295

                                                                        
Query: 255  cgccgcgcacgcgcagtcgtccaggcacgccctcttgcacgcctcctcgctcacccgctc 314
            ||||  ||||||||||||| ||| ||||||   |||||||||| |||||| ||||| |||
Sbjct: 1294 cgccatgcacgcgcagtcgcccaagcacgctgccttgcacgccgcctcgcccaccctctc 1235

                                                                        
Query: 315  catcgcccgcatgctcgttgtgtggtcgttgaagtacgccgtgctcgc-cagcgacacca 373
            || || ||||||||| ||   ||||  ||||||||| |||||| |||| |||||||||||
Sbjct: 1234 cagcgtccgcatgctggtgtcgtggctgttgaagtaggccgtg-tcgcgcagcgacacca 1176

                             
Query: 374  gccggtgctgcgcgcgc 390
            |||||||| ||||||||
Sbjct: 1175 gccggtgccgcgcgcgc 1159
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>ref|XM_800357.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053503639.30) partial mRNA
          Length = 2274

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 282  cgccctcttgcacgcctcctcgctca 307
            ||||||||| ||||||||||||||||
Sbjct: 1413 cgccctcttccacgcctcctcgctca 1388
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>ref|XM_807986.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507609.80) partial mRNA
          Length = 2274

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 282  cgccctcttgcacgcctcctcgctca 307
            ||||||||| ||||||||||||||||
Sbjct: 1413 cgccctcttccacgcctcctcgctca 1388
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>emb|CT009662.23| Mouse DNA sequence from clone CH29-511O15 on chromosome 17, complete
             sequence
          Length = 231197

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 251   gcgccgccgcgcacgcgcagtc 272
             ||||||||||||||||||||||
Sbjct: 29522 gcgccgccgcgcacgcgcagtc 29501
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 255     cgccgcgcacgcgcagtcgtc 275
               |||||||||||||||||||||
Sbjct: 2014248 cgccgcgcacgcgcagtcgtc 2014268
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>ref|XM_473044.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1200

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 220 ccgtcgccggcgtcgcggccg 240
           |||||||||||||||||||||
Sbjct: 437 ccgtcgccggcgtcgcggccg 457
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>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   tcgccggcgtcgcggccgtag 243
             |||||||||||||||||||||
Sbjct: 76644 tcgccggcgtcgcggccgtag 76624
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 220      ccgtcgccggcgtcgcggccg 240
                |||||||||||||||||||||
Sbjct: 24874531 ccgtcgccggcgtcgcggccg 24874551
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>gb|AC097470.3| Homo sapiens BAC clone RP11-65E19 from 4, complete sequence
          Length = 110702

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 7     tttgtacatgtatttgtcccataac 31
             ||||||||||||||||| |||||||
Sbjct: 53178 tttgtacatgtatttgtaccataac 53154
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>dbj|AK107880.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-D05, full
           insert sequence
          Length = 513

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 220 ccgtcgccggcgtcgcggccg 240
           |||||||||||||||||||||
Sbjct: 160 ccgtcgccggcgtcgcggccg 180
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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 220    ccgtcgccggcgtcgcggccg 240
              |||||||||||||||||||||
Sbjct: 136247 ccgtcgccggcgtcgcggccg 136267
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 360     cgccagcgacaccagccggt 379
               ||||||||||||||||||||
Sbjct: 4085644 cgccagcgacaccagccggt 4085625
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>gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, complete sequence
          Length = 179782

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tataatactagtgttcagga 103
             ||||||||||||||||||||
Sbjct: 60979 tataatactagtgttcagga 60960
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>gb|AC131719.5| Mus musculus BAC clone RP23-151H15 from chromosome 19, complete sequence
          Length = 216902

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    ccgccgcgcacgcgcagtcg 273
              ||||||||||||||||||||
Sbjct: 113816 ccgccgcgcacgcgcagtcg 113835
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>gb|AY157498.1| Synechococcus sp. PCC 7942 cosmid 4G8, complete sequence
          Length = 31404

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 365   gcgacaccagccggtgctgc 384
             ||||||||||||||||||||
Sbjct: 12009 gcgacaccagccggtgctgc 12028
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>emb|AJ005522.1|HAA005522 Hippopotamus amphibius gene for pancreatic ribonuclease
          Length = 348

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 137 tgatgtgcatggtggagttg 156
           ||||||||||||||||||||
Sbjct: 244 tgatgtgcatggtggagttg 225
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 365     gcgacaccagccggtgctgc 384
               ||||||||||||||||||||
Sbjct: 2416439 gcgacaccagccggtgctgc 2416458
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>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete
              sequence
          Length = 240827

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    tgatgtgcatggtggagttg 156
              ||||||||||||||||||||
Sbjct: 142010 tgatgtgcatggtggagttg 142029
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>gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, complete sequence
          Length = 183378

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  tgatgtgcatggtggagttg 156
            ||||||||||||||||||||
Sbjct: 9598 tgatgtgcatggtggagttg 9579
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>gb|AC034216.5| Homo sapiens chromosome 5 clone CTD-2004C12, complete sequence
          Length = 178405

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   tgatgtgcatggtggagttg 156
             ||||||||||||||||||||
Sbjct: 72808 tgatgtgcatggtggagttg 72789
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>dbj|AK050511.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length
            enriched library, clone:C820005J08 product:tyrosine
            3-monooxygenase/tryptophan 5-monooxygenase activation
            protein, zeta polypeptide, full insert sequence
          Length = 3278

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   tataatactagtgttcagga 103
            ||||||||||||||||||||
Sbjct: 1412 tataatactagtgttcagga 1393
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 251     gcgccgccgcgcacgcgcag 270
               ||||||||||||||||||||
Sbjct: 2170552 gcgccgccgcgcacgcgcag 2170533
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>gb|AC157482.2| Pan troglodytes BAC clone CH251-366D6 from chromosome unknown, complete
              sequence
          Length = 168325

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tgatgtgcatggtggagttg 156
              ||||||||||||||||||||
Sbjct: 144384 tgatgtgcatggtggagttg 144365
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     gcaccacctcgggccgcacc 180
               ||||||||||||||||||||
Sbjct: 2418982 gcaccacctcgggccgcacc 2419001
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>gb|AC004511.1|AC004511 Homo sapiens chromosome 5, P1 clone 792C12 (LBNL H22), complete
             sequence
          Length = 45005

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   tgatgtgcatggtggagttg 156
             ||||||||||||||||||||
Sbjct: 12645 tgatgtgcatggtggagttg 12664
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 365     gcgacaccagccggtgctgc 384
               ||||||||||||||||||||
Sbjct: 1900611 gcgacaccagccggtgctgc 1900592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,543,226
Number of Sequences: 3902068
Number of extensions: 2543226
Number of successful extensions: 58466
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57884
Number of HSP's gapped (non-prelim): 576
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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