ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet117d08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474449.1| Oryza sativa (japonica cultivar-group), predic... 111 2e-21
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
3dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
4tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 111 2e-21
5emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 111 2e-21
6ref|XM_474454.1| Oryza sativa (japonica cultivar-group), predic... 101 2e-18
7emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207... 101 2e-18
8dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
9tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 101 2e-18
10emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 101 2e-18
11ref|XM_474450.1| Oryza sativa (japonica cultivar-group), predic... 86 1e-13
12tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 86 1e-13
13dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 2e-11
14emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 52 0.001
15dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
16tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 52 0.001
17emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4,... 52 0.001
18gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, par... 48 0.021
19ref|XM_474448.1| Oryza sativa (japonica cultivar-group), predic... 44 0.33
20gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (P... 44 0.33
21dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.33
22dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.33
23tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 44 0.33
24gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 42 1.3
25ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM036... 42 1.3
26dbj|AB178018.1| Ralstonia solanacearum hpx24 gene for hypothetic... 42 1.3
27gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete g... 40 5.1
28gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, p... 40 5.1
29gb|AC124480.5| Mus musculus BAC clone RP24-117B21 from chromosom... 40 5.1
30ref|XM_501984.1| Yarrowia lipolytica CLIB122, YALI0C18645g predi... 40 5.1
31gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 5.1
32emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cl... 40 5.1
33emb|AJ538328.1|ECL538328 Enterobacter cloacae putative hemin upt... 40 5.1
34gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.1
35gb|AF340167.1|AF340167 Streptomyces verticillus polyketide synth... 40 5.1
36gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the... 40 5.1
37emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for a... 40 5.1
38ref|NM_210013.1| Eremothecium gossypii AEL201Wp (AEL201W), mRNA 40 5.1
39gb|AY110228.1| Zea mays CL32412_1 mRNA sequence 40 5.1
40gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.1
41emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 5.1
42gb|U11701.1|HSU11701 Human LIM-homeobox domain protein (hLH-2) m... 40 5.1 
>ref|XM_474449.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1059

 Score =  111 bits (56), Expect = 2e-21
 Identities = 134/160 (83%)
 Strand = Plus / Minus

                                                                       
Query: 225 gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 284
           |||||||||||| |||||||| |||||||| |||||||||| |||  |  ||  ||||||
Sbjct: 969 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 910

                                                                       
Query: 285 ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 344
           | ||||||| ||||| |||||  ||||||||||| |||||    ||||||||||||| ||
Sbjct: 909 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 850

                                                   
Query: 345 gatgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
           ||||| |||||||||  ||| ||| |||||||||||||||
Sbjct: 849 gatggacgccgtggtctggttcttcatgagcgccatgtcg 810
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  111 bits (56), Expect = 2e-21
 Identities = 134/160 (83%)
 Strand = Plus / Plus

                                                                            
Query: 225      gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 284
                |||||||||||| |||||||| |||||||| |||||||||| |||  |  ||  ||||||
Sbjct: 35250654 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 35250713

                                                                            
Query: 285      ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 344
                | ||||||| ||||| |||||  ||||||||||| |||||    ||||||||||||| ||
Sbjct: 35250714 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 35250773

                                                        
Query: 345      gatgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
                ||||| |||||||||  ||| ||| |||||||||||||||
Sbjct: 35250774 gatggacgccgtggtctggttcttcatgagcgccatgtcg 35250813



 Score =  101 bits (51), Expect = 2e-18
 Identities = 89/99 (89%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                            
Query: 287      ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 345
                ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| |||
Sbjct: 35280836 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 35280894

                                                       
Query: 346      atgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
                |||||||||||| | ||||||||||||||||||||||||
Sbjct: 35280895 atgggcgccgtgatccggtccttgatgagcgccatgtcg 35280933



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 90/103 (87%), Gaps = 2/103 (1%)
 Strand = Plus / Plus

                                                                            
Query: 279      gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 337
                ||||||| ||||||| ||||||||||||  |||||| ||| ||||| | |||| ||||||
Sbjct: 35258114 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 35258172

                                                           
Query: 338      gcctcacgatgggcgccgtggtgcggtccttgatgagcgccat 380
                |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 35258173 gcctgacgattggcgccgtgatccggtccttgatgagcgccat 35258215



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 282      cttggccatggatttggcgaactgcgcgaagaag 315
                |||| ||||||| |||||||||||||||||||||
Sbjct: 20964324 cttgaccatggacttggcgaactgcgcgaagaag 20964291



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 223      ctgaagcagctgcgacggatctcaccgacgtt 254
                |||||||||||||| |||||||| ||||||||
Sbjct: 35280772 ctgaagcagctgcggcggatctcgccgacgtt 35280803



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 223      ctgaagcagctgcgacggatctcaccgacgtt 254
                |||||||||||||| |||||||| ||||||||
Sbjct: 35258058 ctgaagcagctgcggcggatctcgccgacgtt 35258089



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                            
Query: 299      cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
                ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 35242602 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 35242661

                                          
Query: 359      tgcggtccttgatgagcgccatgtcg 384
                 | |||||  ||||||||||||||||
Sbjct: 35242662 gggggtccaggatgagcgccatgtcg 35242687
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>dbj|AK067667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118D03, full
            insert sequence
          Length = 1385

 Score =  111 bits (56), Expect = 2e-21
 Identities = 134/160 (83%)
 Strand = Plus / Minus

                                                                        
Query: 225  gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 284
            |||||||||||| |||||||| |||||||| |||||||||| |||  |  ||  ||||||
Sbjct: 1100 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1041

                                                                        
Query: 285  ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 344
            | ||||||| ||||| |||||  ||||||||||| |||||    ||||||||||||| ||
Sbjct: 1040 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 981

                                                    
Query: 345  gatgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
            ||||| |||||||||  ||| ||| |||||||||||||||
Sbjct: 980  gatggacgccgtggtctggttcttcatgagcgccatgtcg 941
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>tpe|BN000591.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx62 gene for
            class III peroxidase 62 precursor, exons 1-2
          Length = 1186

 Score =  111 bits (56), Expect = 2e-21
 Identities = 134/160 (83%)
 Strand = Plus / Minus

                                                                        
Query: 225  gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 284
            |||||||||||| |||||||| |||||||| |||||||||| |||  |  ||  ||||||
Sbjct: 1096 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 1037

                                                                        
Query: 285  ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 344
            | ||||||| ||||| |||||  ||||||||||| |||||    ||||||||||||| ||
Sbjct: 1036 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 977

                                                    
Query: 345  gatgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
            ||||| |||||||||  ||| ||| |||||||||||||||
Sbjct: 976  gatggacgccgtggtctggttcttcatgagcgccatgtcg 937
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>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
             complete sequence
          Length = 173770

 Score =  111 bits (56), Expect = 2e-21
 Identities = 134/160 (83%)
 Strand = Plus / Plus

                                                                         
Query: 225   gaagcagctgcgacggatctcaccgacgttgccgccgggccggggcgcggtggcgagctt 284
             |||||||||||| |||||||| |||||||| |||||||||| |||  |  ||  ||||||
Sbjct: 46499 gaagcagctgcggcggatctcgccgacgttcccgccgggcctgggtaccttgctgagctt 46558

                                                                         
Query: 285   ggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcac 344
             | ||||||| ||||| |||||  ||||||||||| |||||    ||||||||||||| ||
Sbjct: 46559 gaccatggacttggcaaactggtcgaagaaggcggccttgtcctgcgcgaactgcctgac 46618

                                                     
Query: 345   gatgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
             ||||| |||||||||  ||| ||| |||||||||||||||
Sbjct: 46619 gatggacgccgtggtctggttcttcatgagcgccatgtcg 46658



 Score =  101 bits (51), Expect = 2e-18
 Identities = 89/99 (89%), Gaps = 2/99 (2%)
 Strand = Plus / Plus

                                                                         
Query: 287   ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 345
             ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| |||
Sbjct: 76681 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 76739

                                                    
Query: 346   atgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
             |||||||||||| | ||||||||||||||||||||||||
Sbjct: 76740 atgggcgccgtgatccggtccttgatgagcgccatgtcg 76778



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 90/103 (87%), Gaps = 2/103 (1%)
 Strand = Plus / Plus

                                                                         
Query: 279   gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 337
             ||||||| ||||||| ||||||||||||  |||||| ||| ||||| | |||| ||||||
Sbjct: 53959 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 54017

                                                        
Query: 338   gcctcacgatgggcgccgtggtgcggtccttgatgagcgccat 380
             |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 54018 gcctgacgattggcgccgtgatccggtccttgatgagcgccat 54060



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 223   ctgaagcagctgcgacggatctcaccgacgtt 254
             |||||||||||||| |||||||| ||||||||
Sbjct: 76617 ctgaagcagctgcggcggatctcgccgacgtt 76648



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 223   ctgaagcagctgcgacggatctcaccgacgtt 254
             |||||||||||||| |||||||| ||||||||
Sbjct: 53903 ctgaagcagctgcggcggatctcgccgacgtt 53934



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                         
Query: 299   cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
             ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 38447 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 38506

                                       
Query: 359   tgcggtccttgatgagcgccatgtcg 384
              | |||||  ||||||||||||||||
Sbjct: 38507 gggggtccaggatgagcgccatgtcg 38532
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>ref|XM_474454.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1017

 Score =  101 bits (51), Expect = 2e-18
 Identities = 89/99 (89%), Gaps = 2/99 (2%)
 Strand = Plus / Minus

                                                                       
Query: 287 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 345
           ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| |||
Sbjct: 886 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 828

                                                  
Query: 346 atgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
           |||||||||||| | ||||||||||||||||||||||||
Sbjct: 827 atgggcgccgtgatccggtccttgatgagcgccatgtcg 789



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 223 ctgaagcagctgcgacggatctcaccgacgtt 254
           |||||||||||||| |||||||| ||||||||
Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgtt 919
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>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome
          Length = 124321

 Score =  101 bits (51), Expect = 2e-18
 Identities = 95/107 (88%), Gaps = 2/107 (1%)
 Strand = Plus / Minus

                                                                         
Query: 279   gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 337
             ||||||| ||||||| ||||||||||||| |||||| ||| ||||| | |||| ||||||
Sbjct: 75713 gagcttgaccatggacttggcgaactgcgtgaagaatgcggccttg-tccgcggcgaact 75655

                                                            
Query: 338   gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
             |||| ||||| ||||||||| | ||||||||||||||||||||||||
Sbjct: 75654 gcctgacgattggcgccgtgatccggtccttgatgagcgccatgtcg 75608



 Score =  101 bits (51), Expect = 2e-18
 Identities = 89/99 (89%), Gaps = 2/99 (2%)
 Strand = Plus / Minus

                                                                         
Query: 287   ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 345
             ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| |||
Sbjct: 72398 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 72340

                                                    
Query: 346   atgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
             |||||||||||| | ||||||||||||||||||||||||
Sbjct: 72339 atgggcgccgtgatccggtccttgatgagcgccatgtcg 72301



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 223   ctgaagcagctgcgacggatctcaccgacgtt 254
             |||||||||||||| |||||||| ||||||||
Sbjct: 75769 ctgaagcagctgcggcggatctcgccgacgtt 75738



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 223   ctgaagcagctgcgacggatctcaccgacgtt 254
             |||||||||||||| |||||||| ||||||||
Sbjct: 72462 ctgaagcagctgcggcggatctcgccgacgtt 72431



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                         
Query: 299   cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
             ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 82498 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 82439

                                       
Query: 359   tgcggtccttgatgagcgccatgtcg 384
              | |||||  ||||||||||||||||
Sbjct: 82438 gggggtccaggatgagcgccatgtcg 82413
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>dbj|AK073360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030A01, full
           insert sequence
          Length = 1240

 Score =  101 bits (51), Expect = 2e-18
 Identities = 89/99 (89%), Gaps = 2/99 (2%)
 Strand = Plus / Minus

                                                                       
Query: 287 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 345
           ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| |||
Sbjct: 952 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 894

                                                  
Query: 346 atgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
           |||||||||||| | ||||||||||||||||||||||||
Sbjct: 893 atgggcgccgtgatccggtccttgatgagcgccatgtcg 855



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 223  ctgaagcagctgcgacggatctcaccgacgtt 254
            |||||||||||||| |||||||| ||||||||
Sbjct: 1016 ctgaagcagctgcggcggatctcgccgacgtt 985
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>tpe|BN000593.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx64 gene for
           class III peroxidase 64 precursor, exons 1-2
          Length = 1091

 Score =  101 bits (51), Expect = 2e-18
 Identities = 89/99 (89%), Gaps = 2/99 (2%)
 Strand = Plus / Minus

                                                                       
Query: 287 ccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaactgcctcacg 345
           ||||||| ||||||||||||| |||||||||| ||||| | || | |||||||||| |||
Sbjct: 960 ccatggacttggcgaactgcgtgaagaaggcggccttg-tccgtggcgaactgcctgacg 902

                                                  
Query: 346 atgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
           |||||||||||| | ||||||||||||||||||||||||
Sbjct: 901 atgggcgccgtgatccggtccttgatgagcgccatgtcg 863



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 223  ctgaagcagctgcgacggatctcaccgacgtt 254
            |||||||||||||| |||||||| ||||||||
Sbjct: 1024 ctgaagcagctgcggcggatctcgccgacgtt 993
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>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete
             sequence
          Length = 82895

 Score =  101 bits (51), Expect = 2e-18
 Identities = 95/107 (88%), Gaps = 2/107 (1%)
 Strand = Plus / Plus

                                                                         
Query: 279   gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 337
             ||||||| ||||||| ||||||||||||| |||||| ||| ||||| | |||| ||||||
Sbjct: 81334 gagcttgaccatggacttggcgaactgcgtgaagaatgcggccttg-tccgcggcgaact 81392

                                                            
Query: 338   gcctcacgatgggcgccgtggtgcggtccttgatgagcgccatgtcg 384
             |||| ||||| ||||||||| | ||||||||||||||||||||||||
Sbjct: 81393 gcctgacgattggcgccgtgatccggtccttgatgagcgccatgtcg 81439



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 223   ctgaagcagctgcgacggatctcaccgacgtt 254
             |||||||||||||| |||||||| ||||||||
Sbjct: 81278 ctgaagcagctgcggcggatctcgccgacgtt 81309



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                         
Query: 299   cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
             ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 74549 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 74608

                                       
Query: 359   tgcggtccttgatgagcgccatgtcg 384
              | |||||  ||||||||||||||||
Sbjct: 74609 gggggtccaggatgagcgccatgtcg 74634
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>ref|XM_474450.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 90/103 (87%), Gaps = 2/103 (1%)
 Strand = Plus / Minus

                                                                       
Query: 279 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 337
           ||||||| ||||||| ||||||||||||  |||||| ||| ||||| | |||| ||||||
Sbjct: 894 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 836

                                                      
Query: 338 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccat 380
           |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 835 gcctgacgattggcgccgtgatccggtccttgatgagcgccat 793



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 223 ctgaagcagctgcgacggatctcaccgacgtt 254
           |||||||||||||| |||||||| ||||||||
Sbjct: 950 ctgaagcagctgcggcggatctcgccgacgtt 919
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>tpe|BN000592.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx63 gene for
           class III peroxidase 63 precursor, exons 1-2
          Length = 1098

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 90/103 (87%), Gaps = 2/103 (1%)
 Strand = Plus / Minus

                                                                       
Query: 279 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 337
           ||||||| ||||||| ||||||||||||  |||||| ||| ||||| | |||| ||||||
Sbjct: 984 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgaact 926

                                                      
Query: 338 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccat 380
           |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 925 gcctgacgattggcgccgtgatccggtccttgatgagcgccat 883



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 223  ctgaagcagctgcgacggatctcaccgacgtt 254
            |||||||||||||| |||||||| ||||||||
Sbjct: 1040 ctgaagcagctgcggcggatctcgccgacgtt 1009
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>dbj|AK070680.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060N16, full
           insert sequence
          Length = 2256

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 89/103 (86%), Gaps = 2/103 (1%)
 Strand = Plus / Minus

                                                                       
Query: 279 gagcttggccatggatttggcgaactgcgcgaagaaggcgtccttgctgcgcg-cgaact 337
           ||||||| ||||||| ||||||||||||  |||||| ||| ||||| | |||| ||| ||
Sbjct: 919 gagcttgaccatggacttggcgaactgcctgaagaatgcggccttg-tccgcggcgagct 861

                                                      
Query: 338 gcctcacgatgggcgccgtggtgcggtccttgatgagcgccat 380
           |||| ||||| ||||||||| | ||||||||||||||||||||
Sbjct: 860 gcctgacgattggcgccgtgatccggtccttgatgagcgccat 818



 Score = 48.1 bits (24), Expect = 0.021
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 223 ctgaagcagctgcgacggatctcaccgacgtt 254
           |||||||||||||| |||||||| ||||||||
Sbjct: 975 ctgaagcagctgcggcggatctcgccgacgtt 944
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 282   cttggccatggatttggcgaactgcgcgaagaag 315
             |||| ||||||| |||||||||||||||||||||
Sbjct: 67556 cttgaccatggacttggcgaactgcgcgaagaag 67523
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>dbj|AK108989.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-F11, full
            insert sequence
          Length = 1351

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 282  cttggccatggatttggcgaactgcgcgaagaag 315
            |||| ||||||| |||||||||||||||||||||
Sbjct: 1045 cttgaccatggacttggcgaactgcgcgaagaag 1012
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>tpe|BN000583.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx54 gene for
           class III peroxidase 54 precursor, exon 1
          Length = 1038

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 282 cttggccatggatttggcgaactgcgcgaagaag 315
           |||| ||||||| |||||||||||||||||||||
Sbjct: 963 cttgaccatggacttggcgaactgcgcgaagaag 930
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>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04,
            complete sequence
          Length = 140890

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 282  cttggccatggatttggcgaactgcgcgaagaag 315
            |||| ||||||| |||||||||||||||||||||
Sbjct: 9730 cttgaccatggacttggcgaactgcgcgaagaag 9697
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>gb|AY857763.1| Triticum monococcum peroxidase 9 (POX9) mRNA, partial cds
          Length = 760

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 287 ccatggatttggcgaactgcgcgaagaa 314
           |||||||||||||||||||| |||||||
Sbjct: 489 ccatggatttggcgaactgctcgaagaa 462
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>ref|XM_474448.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1023

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 299 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
           ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 889 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 830

                                     
Query: 359 tgcggtccttgatgagcgccatgtcg 384
            | |||||  ||||||||||||||||
Sbjct: 829 gggggtccaggatgagcgccatgtcg 804
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>gb|DQ376124.1| Eucalyptus globulus subsp. globulus peroxidase (Px1) mRNA, partial
           cds
          Length = 957

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 282 cttggccatggatttggcgaactgcgcgaagaag 315
           |||| ||||||| |||||||||||| ||||||||
Sbjct: 723 cttgaccatggacttggcgaactgctcgaagaag 690
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>dbj|AK104928.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B06, full
           insert sequence
          Length = 1299

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 299 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
           ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 978 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 919

                                     
Query: 359 tgcggtccttgatgagcgccatgtcg 384
            | |||||  ||||||||||||||||
Sbjct: 918 gggggtccaggatgagcgccatgtcg 893
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>dbj|AK065090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L22, full
           insert sequence
          Length = 1333

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                       
Query: 299 cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
           ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 979 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 920

                                     
Query: 359 tgcggtccttgatgagcgccatgtcg 384
            | |||||  ||||||||||||||||
Sbjct: 919 gggggtccaggatgagcgccatgtcg 894
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>tpe|BN000590.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx61 gene for
            class III peroxidase 61, exons 1-2
          Length = 1178

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 299  cgaactgcgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtgg 358
            ||||||||| |||||||||| |||||    |||||||| |||| ||||||| ||| ||  
Sbjct: 1044 cgaactgcgtgaagaaggcggccttgtcctgcgcgaaccgcctgacgatggccgcagttt 985

                                      
Query: 359  tgcggtccttgatgagcgccatgtcg 384
             | |||||  ||||||||||||||||
Sbjct: 984  gggggtccaggatgagcgccatgtcg 959
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 183    ggcgtcgacgacggtgtcgatggcgcgccgggc 215
              |||||||| |||| |||||||||||||| ||||
Sbjct: 309971 ggcgtcgatgacgttgtcgatggcgcgctgggc 310003
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>ref|XM_754706.1| Ustilago maydis 521 hypothetical protein (UM03652.1) partial mRNA
          Length = 1404

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 187 tcgacgacggtgtcgatggcg 207
           |||||||||||||||||||||
Sbjct: 175 tcgacgacggtgtcgatggcg 195
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>dbj|AB178018.1| Ralstonia solanacearum hpx24 gene for hypothetical protein, complete
            cds
          Length = 6913

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 194  cggtgtcgatggcgcgccggg 214
            |||||||||||||||||||||
Sbjct: 5827 cggtgtcgatggcgcgccggg 5807
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>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 346     atgggcgccgtggtgcggtccttg 369
               ||||||||| ||||||||||||||
Sbjct: 1621721 atgggcgccatggtgcggtccttg 1621698
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>gb|AY857764.1| Triticum monococcum peroxidase 10 (POX10) mRNA, partial cds
          Length = 1308

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 287 ccatggatttggcgaactgcgcgaagaaggcg 318
           ||||||| ||||||||||||  ||||||||||
Sbjct: 925 ccatggacttggcgaactgccggaagaaggcg 894
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>gb|AC124480.5| Mus musculus BAC clone RP24-117B21 from chromosome 5, complete sequence
          Length = 189616

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   ctccccgtcaccagcactgg 184
             ||||||||||||||||||||
Sbjct: 95725 ctccccgtcaccagcactgg 95744
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>ref|XM_501984.1| Yarrowia lipolytica CLIB122, YALI0C18645g predicted mRNA
          Length = 2925

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 225  gaagcagctgcgacggatct 244
            ||||||||||||||||||||
Sbjct: 2788 gaagcagctgcgacggatct 2769
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    tgggcgccgtggtgcggtcc 366
              ||||||||||||||||||||
Sbjct: 892644 tgggcgccgtggtgcggtcc 892625
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>emb|AJ632270.1| Actinoplanes teichomyceticus teicoplanin gene cluster
          Length = 89976

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   cgggccggggcgcggtggcg 279
             ||||||||||||||||||||
Sbjct: 75093 cgggccggggcgcggtggcg 75112
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>emb|AJ538328.1|ECL538328 Enterobacter cloacae putative hemin uptake system (ehuPASTUV genes),
            strain Z-2376
          Length = 10269

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 237  acggatctcaccgacgttgccgcc 260
            ||||||| ||||||||||||||||
Sbjct: 3380 acggatcacaccgacgttgccgcc 3403
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    gggccggggcgcggtggcga 280
              ||||||||||||||||||||
Sbjct: 258201 gggccggggcgcggtggcga 258220
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>gb|AF340167.1|AF340167 Streptomyces verticillus polyketide synthase gene, partial cds
          Length = 6219

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 263  gccggggcgcggtggcgagc 282
            ||||||||||||||||||||
Sbjct: 1278 gccggggcgcggtggcgagc 1259
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>gb|AE005086.1| Halobacterium sp. NRC-1 section 117 of 170 of the complete genome
          Length = 11548

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 187  tcgacgacggtgtcgatggcgcgc 210
            |||||| |||||||||||||||||
Sbjct: 1338 tcgacggcggtgtcgatggcgcgc 1361
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>emb|AJ438168.1|HSA438168 Halobacterium salinarum basB gene for amino acid binding protein
          Length = 1242

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 tcgacgacggtgtcgatggcgcgc 210
           |||||| |||||||||||||||||
Sbjct: 191 tcgacggcggtgtcgatggcgcgc 168
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>ref|NM_210013.1| Eremothecium gossypii AEL201Wp (AEL201W), mRNA
          Length = 1725

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gggccggggcgcggtggcga 280
           ||||||||||||||||||||
Sbjct: 262 gggccggggcgcggtggcga 281
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>gb|AY110228.1| Zea mays CL32412_1 mRNA sequence
          Length = 1199

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                   
Query: 306 cgcgaagaaggcgtccttgctgcgcgcgaactgcctcacgatgggcgccgtggtgc 361
           |||||||||| |||| | ||||  |||||||||    |||||||||||||||||||
Sbjct: 310 cgcgaagaagtcgtcttggctggccgcgaactggtcgacgatgggcgccgtggtgc 365
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 254     tgccgccgggccggggcgcggtgg 277
               ||||||||||||| ||||||||||
Sbjct: 4487536 tgccgccgggccgcggcgcggtgg 4487513
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     gaagcagctgcgacggatct 244
               ||||||||||||||||||||
Sbjct: 2560071 gaagcagctgcgacggatct 2560052
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>gb|U11701.1|HSU11701 Human LIM-homeobox domain protein (hLH-2) mRNA, complete cds
          Length = 1887

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 261 gggccggggcgcggtggcga 280
           ||||||||||||||||||||
Sbjct: 377 gggccggggcgcggtggcga 396


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,347,177
Number of Sequences: 3902068
Number of extensions: 2347177
Number of successful extensions: 47213
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 46773
Number of HSP's gapped (non-prelim): 428
length of query: 384
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 362
effective length of database: 17,147,199,772
effective search space: 6207286317464
effective search space used: 6207286317464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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