ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet117d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009009.1| Triticum aestivum clone wdk3c.pk005.b17:fis, full... 375 e-101
2gb|BT016540.1| Zea mays clone Contig373 mRNA sequence 92 1e-15
3gb|BT016854.1| Zea mays clone Contig687 mRNA sequence 92 1e-15
4gb|AY103658.1| Zea mays PCO118382 mRNA sequence 92 1e-15
5dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for ... 70 4e-09
6dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA ... 70 4e-09
7dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
8dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
9dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
10dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
11dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 4e-09
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
13dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
14dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 66 7e-08
15emb|X63429.1|PMAAT2 P.miliaceum mRNA for aspartate aminotransfer... 64 3e-07
16dbj|D25322.1|PNIAATA Panicum miliaceum gene for cytosolic aspart... 64 3e-07
17ref|XM_463436.1| Oryza sativa (japonica cultivar-group), predic... 60 4e-06
18gb|AF470320.1| Musa acuminata aspartate aminotransferase 2 mRNA,... 58 2e-05
19gb|AF470319.1| Musa acuminata aspartate aminotransferase 1 mRNA,... 58 2e-05
20gb|M92660.1|DARAAT Daucus carota aspartate aminotransferase (cyt... 52 0.001
21emb|X61577.1|MSAAT1MR M.sativa aat-1 mRNA for aspartate aminotra... 48 0.016
22gb|DQ455441.1| Medicago truncatula cDNA-AFLP fragment BT32M32_38... 48 0.016
23gb|AC152493.3| Rhinolophus ferrumequinum clone VMRC7-244O22, com... 42 0.99
24gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 42 0.99
25dbj|AK038675.1| Mus musculus adult male hypothalamus cDNA, RIKEN... 42 0.99
26gb|AF187872.1|AF187872 Cavia porcellus inwardly-rectifying potas... 42 0.99
27gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 42 0.99
28gb|AC153827.5| Mus musculus 6 BAC RP23-58O24 (Roswell Park Cance... 42 0.99
29gb|AC153875.3| Mus musculus 6 BAC RP23-218N14 (Roswell Park Canc... 42 0.99
30gb|U33846.1|SAU33846 Sulfolobus acidocaldarius DNA polymerase ge... 42 0.99
31gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, co... 42 0.99
32gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome... 40 3.9
33gb|AC183752.3| Rhinolophus ferrumequinum clone VMRC7-380K18, com... 40 3.9
34gb|AC136507.19| Medicago truncatula clone mth2-24o19, complete s... 40 3.9
35gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete s... 40 3.9
36emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chr... 40 3.9
37gb|AC084116.7| Homo sapiens chromosome 8, clone RP11-103H7, comp... 40 3.9
38emb|AL714011.12| Mouse DNA sequence from clone RP23-380O17 on ch... 40 3.9
39gb|AC104384.3| Homo sapiens chromosome 8, clone CTD-2381M20, com... 40 3.9
40gb|AC087808.2| Homo sapiens chromosome 8, clone RP11-89A16, comp... 40 3.9
41gb|AC021396.6|AC021396 Homo sapiens, clone RP11-28I2, complete s... 40 3.9
42emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, c... 40 3.9
43gb|L25334.1|ALFAAT1A Medicago sativa aspartate aminotransferase ... 40 3.9 
>gb|BT009009.1| Triticum aestivum clone wdk3c.pk005.b17:fis, full insert mRNA
            sequence
          Length = 1620

 Score =  375 bits (189), Expect = e-101
 Identities = 270/297 (90%)
 Strand = Plus / Minus

                                                                        
Query: 3    aaagcatcacaactgcagcttattcgggattcaaaatcaccatcatctttaatccggggt 62
            |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct: 1483 aaagcatcacaactgcagcttattcgggattcgaaatcaccataatctttaatccggtgt 1424

                                                                        
Query: 63   gaacaaaactgtctcagacaacaattttagtaagtctacaaggcaaattcctgagttcag 122
            | |||||||||||||||||||||| |||| | ||||||||||||||||||  ||||||||
Sbjct: 1423 gtacaaaactgtctcagacaacaagtttaatgagtctacaaggcaaattctcgagttcag 1364

                                                                        
Query: 123  ccaataacacgcctctggttgaacccttcggacactgctgtaggcaatttaagattttat 182
            ||| |||||| ||||||||||||||| ||||| ||||||||||  |||| ||||||||||
Sbjct: 1363 ccagtaacacacctctggttgaacccctcggaaactgctgtagagaattcaagattttat 1304

                                                                        
Query: 183  tgcggaagggggttgccatgttatcattcacttcagttttgtaaccgcagcatgtatggc 242
            || |  |||||||||  ||||||||||||||||||||||||| || || |||||||||||
Sbjct: 1303 tgtgcgagggggttgaaatgttatcattcacttcagttttgttactgcggcatgtatggc 1244

                                                                     
Query: 243  atctgcaagatggggtacagtcctggagctcaaacctgccatgctgatccttccatc 299
            ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 1243 atctgcaagatggggtacagttctggagctcaaaccggccatgctgatcctcccatc 1187
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>gb|BT016540.1| Zea mays clone Contig373 mRNA sequence
          Length = 1698

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctc 273
            |||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||   ||||
Sbjct: 1422 ttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctc 1363

                                      
Query: 274  aaacctgccatgctgatccttccatc 299
            ||||| |||||||||||||| |||||
Sbjct: 1362 aaaccggccatgctgatcctcccatc 1337
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>gb|BT016854.1| Zea mays clone Contig687 mRNA sequence
          Length = 1481

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                       
Query: 214 ttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctc 273
           |||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||   ||||
Sbjct: 637 ttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctc 696

                                     
Query: 274 aaacctgccatgctgatccttccatc 299
           ||||| |||||||||||||| |||||
Sbjct: 697 aaaccggccatgctgatcctcccatc 722
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>gb|AY103658.1| Zea mays PCO118382 mRNA sequence
          Length = 1690

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                        
Query: 214  ttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctc 273
            |||||||  ||||| ||||| ||||||||||||||||||||||| ||||||||   ||||
Sbjct: 1447 ttcagttgagtaactgcagcgtgtatggcatctgcaagatggggcacagtcctcatgctc 1388

                                      
Query: 274  aaacctgccatgctgatccttccatc 299
            ||||| |||||||||||||| |||||
Sbjct: 1387 aaaccggccatgctgatcctcccatc 1362
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>dbj|AB110193.1| Oryza sativa (japonica cultivar-group) mRNA for aspartate
            aminotransferase, complete cds, clone: 22C4AG009
          Length = 1502

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1285 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1226

                                               
Query: 265  ctggagctcaaacctgccatgctgatccttccatc 299
            ||   ||||||||| ||||| |||||||| |||||
Sbjct: 1225 ctcccgctcaaaccagccatactgatcctcccatc 1191
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>dbj|D14673.1|RICAAT Oryza sativa (japonica cultivar-group) mRNA for aspartate
            aminotransferase, complete cds
          Length = 1514

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1297 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1238

                                               
Query: 265  ctggagctcaaacctgccatgctgatccttccatc 299
            ||   ||||||||| ||||| |||||||| |||||
Sbjct: 1237 ctcccgctcaaaccagccatactgatcctcccatc 1203
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>dbj|AK104829.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-H04, full
            insert sequence
          Length = 1519

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1302 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1243

                                               
Query: 265  ctggagctcaaacctgccatgctgatccttccatc 299
            ||   ||||||||| ||||| |||||||| |||||
Sbjct: 1242 ctcccgctcaaaccagccatactgatcctcccatc 1208
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>dbj|AK103586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B14, full
            insert sequence
          Length = 1888

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1671 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1612

                                               
Query: 265  ctggagctcaaacctgccatgctgatccttccatc 299
            ||   ||||||||| ||||| |||||||| |||||
Sbjct: 1611 ctcccgctcaaaccagccatactgatcctcccatc 1577
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>dbj|AK103133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120D06, full
            insert sequence
          Length = 1525

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1308 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1249

                                               
Query: 265  ctggagctcaaacctgccatgctgatccttccatc 299
            ||   ||||||||| ||||| |||||||| |||||
Sbjct: 1248 ctcccgctcaaaccagccatactgatcctcccatc 1214
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>dbj|AK099338.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026J06, full
            insert sequence
          Length = 1626

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1409 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1350

                                               
Query: 265  ctggagctcaaacctgccatgctgatccttccatc 299
            ||   ||||||||| ||||| |||||||| |||||
Sbjct: 1349 ctcccgctcaaaccagccatactgatcctcccatc 1315
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>dbj|AK067557.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112H20, full
            insert sequence
          Length = 1668

 Score = 69.9 bits (35), Expect = 4e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 205  atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
            |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 1451 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 1392

                                               
Query: 265  ctggagctcaaacctgccatgctgatccttccatc 299
            ||   ||||||||| ||||| |||||||| |||||
Sbjct: 1391 ctcccgctcaaaccagccatactgatcctcccatc 1357
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                            
Query: 205      atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
                |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 31992352 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 31992411

                                             
Query: 265      ctggagctcaaacctgccatgctgatcct 293
                ||   ||||||||| ||||| ||||||||
Sbjct: 31992412 ctcccgctcaaaccagccatactgatcct 31992440
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0512C01
          Length = 176261

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 205   atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
             |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 34166 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 34225

                                          
Query: 265   ctggagctcaaacctgccatgctgatcct 293
             ||   ||||||||| ||||| ||||||||
Sbjct: 34226 ctcccgctcaaaccagccatactgatcct 34254
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460E08
          Length = 170021

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                         
Query: 205   atcattcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtc 264
             |||||||||||||||||||| || || ||||| || |||||||||||||| || |  |||
Sbjct: 89079 atcattcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtc 89138

                                          
Query: 265   ctggagctcaaacctgccatgctgatcct 293
             ||   ||||||||| ||||| ||||||||
Sbjct: 89139 ctcccgctcaaaccagccatactgatcct 89167
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>emb|X63429.1|PMAAT2 P.miliaceum mRNA for aspartate aminotransferase (pcAAT2)
          Length = 1514

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 210  tcacttcagttttgtaaccgcagcatgtatggcatctgcaagatgggg 257
            |||||||||||  ||||| ||||| |||||||||||||||||||||||
Sbjct: 1276 tcacttcagttgagtaactgcagcgtgtatggcatctgcaagatgggg 1229
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>dbj|D25322.1|PNIAATA Panicum miliaceum gene for cytosolic aspartate aminotransferase,
            complete cds
          Length = 7822

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 210  tcacttcagttttgtaaccgcagcatgtatggcatctgcaagatgggg 257
            |||||||||||  ||||| ||||| |||||||||||||||||||||||
Sbjct: 6582 tcacttcagttgagtaactgcagcgtgtatggcatctgcaagatgggg 6535
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>ref|XM_463436.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1224

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 75/90 (83%)
 Strand = Plus / Minus

                                                                        
Query: 210  tcacttcagttttgtaaccgcagcatgtatggcatctgcaagatggggtacagtcctgga 269
            ||||||||||||||| || || ||||| || |||||||||||||| || |  |||||   
Sbjct: 1224 tcacttcagttttgtgactgcggcatggattgcatctgcaagatgcggaatggtcctccc 1165

                                          
Query: 270  gctcaaacctgccatgctgatccttccatc 299
            ||||||||| ||||| |||||||| |||||
Sbjct: 1164 gctcaaaccagccatactgatcctcccatc 1135
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>gb|AF470320.1| Musa acuminata aspartate aminotransferase 2 mRNA, partial cds
          Length = 574

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 223 gtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgcc 282
           ||||| |||||||| ||||||||  ||||||| || || ||  | ||||||||||| |||
Sbjct: 332 gtaactgcagcatgaatggcatcaacaagatgaggaactgtttttgagctcaaaccggcc 273

                            
Query: 283 atgctgatccttccatc 299
           ||||||||||| |||||
Sbjct: 272 atgctgatcctcccatc 256
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>gb|AF470319.1| Musa acuminata aspartate aminotransferase 1 mRNA, partial cds
          Length = 606

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 223 gtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgcc 282
           ||||| |||||||| ||||||||  ||||||| || || ||  | ||||||||||| |||
Sbjct: 332 gtaactgcagcatgaatggcatcaacaagatgaggaactgtttttgagctcaaaccggcc 273

                            
Query: 283 atgctgatccttccatc 299
           ||||||||||| |||||
Sbjct: 272 atgctgatcctcccatc 256
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>gb|M92660.1|DARAAT Daucus carota aspartate aminotransferase (cytoplasmic isoform) mRNA,
            complete cds
          Length = 1523

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                        
Query: 223  gtaaccgcagcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgcc 282
            ||||| |||||||| || |||||||||||||| || || || | ||| || | |||||||
Sbjct: 1228 gtaactgcagcatgaatagcatctgcaagatgaggaactgttcgggaactaagacctgcc 1169

                      
Query: 283  atgctgatcc 292
            ||||||||||
Sbjct: 1168 atgctgatcc 1159
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>emb|X61577.1|MSAAT1MR M.sativa aat-1 mRNA for aspartate aminotransferase
          Length = 1514

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 232  gcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgccatgctgatc 291
            |||||||| ||||| || ||||| || || ||  ||||||||||||| |||||||| |||
Sbjct: 1233 gcatgtattgcatcagccagatgtgggactgttttggagctcaaaccagccatgctaatc 1174

                    
Query: 292  cttccatc 299
            || |||||
Sbjct: 1173 ctcccatc 1166
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>gb|DQ455441.1| Medicago truncatula cDNA-AFLP fragment BT32M32_382 sequence
          Length = 298

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 232 gcatgtatggcatctgcaagatggggtacagtcctggagctcaaacctgccatgctgatc 291
           |||||||| ||||| || ||||| || || ||  ||||||||||||| |||||||| |||
Sbjct: 277 gcatgtattgcatcggccagatgtgggactgttttggagctcaaaccagccatgctaatc 218

                   
Query: 292 cttccatc 299
           || |||||
Sbjct: 217 ctcccatc 210
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>gb|AC152493.3| Rhinolophus ferrumequinum clone VMRC7-244O22, complete sequence
          Length = 75463

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   aagattttattgcggaagggg 193
             |||||||||||||||||||||
Sbjct: 32021 aagattttattgcggaagggg 32041



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 170   tttaagattttattgcggaagggg 193
             ||||||||||||||| ||||||||
Sbjct: 47474 tttaagattttattggggaagggg 47497
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>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 80      acaacaattttagtaagtcta 100
               |||||||||||||||||||||
Sbjct: 1312282 acaacaattttagtaagtcta 1312262
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>dbj|AK038675.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length
           enriched library, clone:A230054C15
           product:unclassifiable, full insert sequence
          Length = 2669

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 102 aaggcaaattcctgagttcag 122
           |||||||||||||||||||||
Sbjct: 944 aaggcaaattcctgagttcag 924
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>gb|AF187872.1|AF187872 Cavia porcellus inwardly-rectifying potassium channel Kir2.1 (KCNJ2)
             gene, complete cds
          Length = 11618

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    acaaaactgtctcagacaaca 85
             |||||||||||||||||||||
Sbjct: 10729 acaaaactgtctcagacaaca 10749
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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 173    aagattttattgcggaagggg 193
              |||||||||||||||||||||
Sbjct: 835329 aagattttattgcggaagggg 835349



 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 170    tttaagattttattgcggaagggg 193
              ||||||||||||||| ||||||||
Sbjct: 850782 tttaagattttattggggaagggg 850805
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>gb|AC153827.5| Mus musculus 6 BAC RP23-58O24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 234403

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   aaggcaaattcctgagttcag 122
             |||||||||||||||||||||
Sbjct: 91674 aaggcaaattcctgagttcag 91694
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>gb|AC153875.3| Mus musculus 6 BAC RP23-218N14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187367

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   aaggcaaattcctgagttcag 122
             |||||||||||||||||||||
Sbjct: 25010 aaggcaaattcctgagttcag 24990
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>gb|U33846.1|SAU33846 Sulfolobus acidocaldarius DNA polymerase gene, complete cds
          Length = 3097

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 80  acaacaattttagtaagtcta 100
           |||||||||||||||||||||
Sbjct: 676 acaacaattttagtaagtcta 656
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>gb|AC158921.17| Mus musculus chromosome 15, clone RP23-120K5, complete sequence
          Length = 218949

 Score = 42.1 bits (21), Expect = 0.99
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    caaggcaaattcctgagttca 121
              |||||||||||||||||||||
Sbjct: 156419 caaggcaaattcctgagttca 156439
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>gb|AC122238.4| Mus musculus BAC clone RP23-143D4 from chromosome 10, complete sequence
          Length = 188476

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    aggcaaattcctgagttcag 122
              ||||||||||||||||||||
Sbjct: 100847 aggcaaattcctgagttcag 100828
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>gb|AC183752.3| Rhinolophus ferrumequinum clone VMRC7-380K18, complete sequence
          Length = 39225

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 170  tttaagattttattgcggaagggg 193
            ||||||||||||||| ||||||||
Sbjct: 3693 tttaagattttattggggaagggg 3716
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>gb|AC136507.19| Medicago truncatula clone mth2-24o19, complete sequence
          Length = 131025

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    gattcaaaatcaccatcatc 49
             ||||||||||||||||||||
Sbjct: 38960 gattcaaaatcaccatcatc 38941
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>gb|AC146941.8| Medicago truncatula clone mth2-133o10, complete sequence
          Length = 134901

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     gattcaaaatcaccatcatc 49
              ||||||||||||||||||||
Sbjct: 118939 gattcaaaatcaccatcatc 118958
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>emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chromosome 13 Contains the
             3' end of the CLYBL gene for citrate lyase beta like (CLB
             bA134O15.1) and a CpG island, complete sequence
          Length = 174128

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aacaaaactgtctcagacaa 83
             ||||||||||||||||||||
Sbjct: 52968 aacaaaactgtctcagacaa 52949
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>gb|AC084116.7| Homo sapiens chromosome 8, clone RP11-103H7, complete sequence
          Length = 185339

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 63     gaacaaaactgtctcagacaacaa 86
              |||||||||||||||| |||||||
Sbjct: 148545 gaacaaaactgtctcaaacaacaa 148522
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>emb|AL714011.12| Mouse DNA sequence from clone RP23-380O17 on chromosome 4 Contains a
            CpG island, complete sequence
          Length = 166093

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  aggcaaattcctgagttcag 122
            ||||||||||||||||||||
Sbjct: 2837 aggcaaattcctgagttcag 2856
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>gb|AC104384.3| Homo sapiens chromosome 8, clone CTD-2381M20, complete sequence
          Length = 163996

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   tctacaaggcaaattcctga 116
            ||||||||||||||||||||
Sbjct: 8025 tctacaaggcaaattcctga 8044
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>gb|AC087808.2| Homo sapiens chromosome 8, clone RP11-89A16, complete sequence
          Length = 189878

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    tctacaaggcaaattcctga 116
             ||||||||||||||||||||
Sbjct: 76258 tctacaaggcaaattcctga 76277
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>gb|AC021396.6|AC021396 Homo sapiens, clone RP11-28I2, complete sequence
          Length = 200673

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 63    gaacaaaactgtctcagacaacaa 86
             |||||||||||||||| |||||||
Sbjct: 43694 gaacaaaactgtctcaaacaacaa 43671
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>emb|BX248117.9| Zebrafish DNA sequence from clone CH211-226D5, complete sequence
          Length = 181542

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     acaattttagtaagtctaca 102
              ||||||||||||||||||||
Sbjct: 108309 acaattttagtaagtctaca 108290
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>gb|L25334.1|ALFAAT1A Medicago sativa aspartate aminotransferase (AAT1) gene, complete cds
          Length = 5474

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 266  tggagctcaaacctgccatgctgatcct 293
            ||||||||||||| |||||||| |||||
Sbjct: 4950 tggagctcaaaccagccatgctaatcct 4923


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,824,600
Number of Sequences: 3902068
Number of extensions: 2824600
Number of successful extensions: 51193
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51116
Number of HSP's gapped (non-prelim): 77
length of query: 299
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 277
effective length of database: 17,147,199,772
effective search space: 4749774336844
effective search space used: 4749774336844
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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