>dbj|AK120594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147G23, full
            insert sequence
          Length = 2189

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Minus

                                                                        
Query: 229  gagaacccggtcctgcactgccgtcgtggatggggacgtcgctaggccaatcttgttcgg 288
            |||||||||||| || || ||||||||||| ||||| ||||| | |||||||||| | ||
Sbjct: 1885 gagaacccggtcttggaccgccgtcgtggagggggaagtcgccaagccaatcttgcttgg 1826

                                                                        
Query: 289  ctctagcttcttagctgcccaggagagcgcttccgcgcccactcttactggggatagcaa 348
            ||| |||||||| || ||||| |||| ||| |||||||| |||||||  ||||| |||| 
Sbjct: 1825 ctccagcttcttggccgcccacgagaacgcctccgcgcctactcttaacggggaaagcag 1766

                                                                        
Query: 349  cagctttaggtcttgcaggaaatcctccgaaccctcatatgtagagaaccgtaggtagat 408
            ||| ||||| ||||||   | |||||| |||||||| || |||||||| || || |||||
Sbjct: 1765 cagttttagatcttgctccagatcctctgaaccctcgtacgtagagaatcgcagatagat 1706

                                                                    
Query: 409  cgtcaacccaagactaagaacaccgatgtactgcaaagtcgtctcccattctagca 464
             ||||  ||||| || |||||||| ||||| |||| |||||| |||||||||||||
Sbjct: 1705 agtcagaccaaggcttagaacacctatgtattgcagagtcgtttcccattctagca 1650

>dbj|AK060416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E12, full
            insert sequence
          Length = 1472

 Score =  143 bits (72), Expect = 6e-31
 Identities = 195/236 (82%)
 Strand = Plus / Minus

                                                                        
Query: 229  gagaacccggtcctgcactgccgtcgtggatggggacgtcgctaggccaatcttgttcgg 288
            |||||||||||| || || ||||||||||| ||||| ||||| | |||||||||| | ||
Sbjct: 1173 gagaacccggtcttggaccgccgtcgtggagggggaagtcgccaagccaatcttgcttgg 1114

                                                                        
Query: 289  ctctagcttcttagctgcccaggagagcgcttccgcgcccactcttactggggatagcaa 348
            ||| |||||||| || ||||| |||| ||| |||||||| |||||||  ||||| |||| 
Sbjct: 1113 ctccagcttcttggccgcccacgagaacgcctccgcgcctactcttaacggggaaagcag 1054

                                                                        
Query: 349  cagctttaggtcttgcaggaaatcctccgaaccctcatatgtagagaaccgtaggtagat 408
            ||| ||||| ||||||   | |||||| |||||||| || |||||||| || || |||||
Sbjct: 1053 cagttttagatcttgctccagatcctctgaaccctcgtacgtagagaatcgcagatagat 994

                                                                    
Query: 409  cgtcaacccaagactaagaacaccgatgtactgcaaagtcgtctcccattctagca 464
             ||||  ||||| || |||||||| ||||| |||| |||||| |||||||||||||
Sbjct: 993  agtcagaccaaggcttagaacacctatgtattgcagagtcgtttcccattctagca 938

>gb|AY105366.1| Zea mays PCO088639 mRNA sequence
          Length = 793

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 115/137 (83%)
 Strand = Plus / Minus

                                                                       
Query: 323 gcgcccactcttactggggatagcaacagctttaggtcttgcaggaaatcctccgaaccc 382
           ||||| ||||||||||| || ||||||||||||||||||| |   |||||||| ||  ||
Sbjct: 512 gcgcctactcttactggagacagcaacagctttaggtctttctccaaatcctcggagtcc 453

                                                                       
Query: 383 tcatatgtagagaaccgtaggtagatcgtcaacccaagactaagaacaccgatgtactgc 442
           |||||||||||||| || | |||||| |||| |||||  || | |||| ||||||| |||
Sbjct: 452 tcatatgtagagaatcgcaagtagatagtcagcccaacgcttaaaacagcgatgtattgc 393

                            
Query: 443 aaagtcgtctcccattc 459
           |||||| ||||||||||
Sbjct: 392 aaagtcatctcccattc 376

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                            
Query: 229      gagaacccggtcctgcactgccgtcgtggatggggacgtcgctaggccaatcttgttcgg 288
                |||||||||||| || || ||||||||||| ||||| ||||| | |||||||||| | ||
Sbjct: 38955022 gagaacccggtcttggaccgccgtcgtggagggggaagtcgccaagccaatcttgcttgg 38955081

                                                               
Query: 289      ctctagcttcttagctgcccaggagagcgcttccgcgcccactctta 335
                ||| |||||||| || ||||| |||| ||| |||||||| |||||||
Sbjct: 38955082 ctccagcttcttggccgcccacgagaacgcctccgcgcctactctta 38955128

>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 229   gagaacccggtcctgcactgccgtcgtggatggggacgtcgctaggccaatcttgttcgg 288
             |||||||||||| || || ||||||||||| ||||| ||||| | |||||||||| | ||
Sbjct: 28655 gagaacccggtcttggaccgccgtcgtggagggggaagtcgccaagccaatcttgcttgg 28714

                                                            
Query: 289   ctctagcttcttagctgcccaggagagcgcttccgcgcccactctta 335
             ||| |||||||| || ||||| |||| ||| |||||||| |||||||
Sbjct: 28715 ctccagcttcttggccgcccacgagaacgcctccgcgcctactctta 28761

>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                          
Query: 229    gagaacccggtcctgcactgccgtcgtggatggggacgtcgctaggccaatcttgttcgg 288
              |||||||||||| || || ||||||||||| ||||| ||||| | |||||||||| | ||
Sbjct: 119808 gagaacccggtcttggaccgccgtcgtggagggggaagtcgccaagccaatcttgcttgg 119867

                                                             
Query: 289    ctctagcttcttagctgcccaggagagcgcttccgcgcccactctta 335
              ||| |||||||| || ||||| |||| ||| |||||||| |||||||
Sbjct: 119868 ctccagcttcttggccgcccacgagaacgcctccgcgcctactctta 119914

>ref|NM_190267.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1785

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 229  gagaacccggtcctgcactgccgtcgtggatggggacgtcgctaggccaatcttgttcgg 288
            |||||||||||| || || ||||||||||| ||||| ||||| | |||||||||| | ||
Sbjct: 1716 gagaacccggtcttggaccgccgtcgtggagggggaagtcgccaagccaatcttgcttgg 1657

                                                   
Query: 289  ctctagcttcttagctgcccaggagagcgcttccgcgcc 327
            ||| |||||||| || ||||| |||| ||| ||||||||
Sbjct: 1656 ctccagcttcttggccgcccacgagaacgcctccgcgcc 1618



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 80/95 (84%)
 Strand = Plus / Minus

                                                                        
Query: 370  atcctccgaaccctcatatgtagagaaccgtaggtagatcgtcaacccaagactaagaac 429
            |||||| |||||||| || |||||||| || || ||||| ||||  ||||| || |||||
Sbjct: 1596 atcctctgaaccctcgtacgtagagaatcgcagatagatagtcagaccaaggcttagaac 1537

                                               
Query: 430  accgatgtactgcaaagtcgtctcccattctagca 464
            ||| ||||| |||| |||||| |||||||||||||
Sbjct: 1536 acctatgtattgcagagtcgtttcccattctagca 1502

>emb|BX649299.5| Zebrafish DNA sequence from clone CH211-209E14 in linkage group 20,
             complete sequence
          Length = 199740

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 164   aaactgtctgtcttgttggact 185
             ||||||||||||||||||||||
Sbjct: 96021 aaactgtctgtcttgttggact 96000

>gb|AC150651.3| Bos taurus  BAC CH240-451E16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 174648

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    tcatggtaccattactaaca 75
             ||||||||||||||||||||
Sbjct: 70829 tcatggtaccattactaaca 70848

>ref|NG_002690.1| Homo sapiens Prader-Willi/Angelman syndrome region (PWSAS@) on chromosome
              15
          Length = 755217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     aacatcagaaacatcaattc 91
              ||||||||||||||||||||
Sbjct: 375632 aacatcagaaacatcaattc 375651

>gb|AY812649.1| Schistosoma japonicum SJCHGC06583 protein mRNA, partial cds
          Length = 1192

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 63  accattactaacatcagaaacatcaatt 90
           ||||| ||||||| ||||||||||||||
Sbjct: 415 accatcactaacaacagaaacatcaatt 442

>ref|XM_808678.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511153.150) partial mRNA
          Length = 600

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 201 gcttcgattcatgctttgctgccgcttt 228
           |||||||||||| ||||||||| |||||
Sbjct: 538 gcttcgattcatcctttgctgcagcttt 565

>gb|AC122454.4| Mus musculus BAC clone RP24-263I14 from chromosome 17, complete sequence
          Length = 198341

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    caaaactgtctgtcttgttg 181
              ||||||||||||||||||||
Sbjct: 101875 caaaactgtctgtcttgttg 101894

>emb|AL773524.13| Human DNA sequence from clone RP11-250H24 on chromosome 9 Contains a
             calponin 2 (CNN2) pseudogene and a novel pseudogene,
             complete sequence
          Length = 125622

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    taacatcagaaacatcaatt 90
             ||||||||||||||||||||
Sbjct: 96522 taacatcagaaacatcaatt 96503

>emb|AL591441.11| Human DNA sequence from clone RP11-459O16 on chromosome 9 Contains a
             novel pseudogene (LOC283464), a calponin 2 (CNN2)
             pseudogene, a novel zinc finger protein pseudogene, a
             pseudogene similar to part of cytochrome P450 family
             protein, a novel pseudogene, a pseudogene similar to part
             of sorting nexin associated golgi protein 1 (SNAG1) and a
             melanoma antigen (LOC51152) pseudogene, complete sequence
          Length = 162441

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    taacatcagaaacatcaatt 90
             ||||||||||||||||||||
Sbjct: 62736 taacatcagaaacatcaatt 62755

>emb|AL591471.8| Human DNA sequence from clone RP11-341A11 on chromosome 9 Contains a
             calponin 2 pseudogene (CNN2) and a novel pseudogene,
             complete sequence
          Length = 131871

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    taacatcagaaacatcaatt 90
             ||||||||||||||||||||
Sbjct: 81705 taacatcagaaacatcaatt 81724

>gb|AC124303.5| Homo sapiens chromosome 15, clone RP11-145P16, complete sequence
          Length = 160535

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     aacatcagaaacatcaattc 91
              ||||||||||||||||||||
Sbjct: 102627 aacatcagaaacatcaattc 102608

>gb|AC010688.6| Drosophila melanogaster 3L BAC RP98-11G5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 201313

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ttataaatttacaatgccgg 39
              ||||||||||||||||||||
Sbjct: 177776 ttataaatttacaatgccgg 177795

>gb|AC183386.2| Pan troglodytes BAC clone CH251-223N18 from chromosome 9, complete
             sequence
          Length = 138215

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    taacatcagaaacatcaatt 90
             ||||||||||||||||||||
Sbjct: 47429 taacatcagaaacatcaatt 47410

>gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181437

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttataaatttacaatgccgg 39
              ||||||||||||||||||||
Sbjct: 151953 ttataaatttacaatgccgg 151934

>gb|AF250841.1|AF250841 Homo sapiens PAC clones A17157 and P0950 imprinted HBII-85 and HBII-52
             small nucleolar RNA genes, complete sequence
          Length = 228017

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    aacatcagaaacatcaattc 91
             ||||||||||||||||||||
Sbjct: 68874 aacatcagaaacatcaattc 68893

>gb|AY520825.1| Mus musculus ISP1 (Isp1) and ISP2 (Isp2) genes, complete cds
          Length = 20247

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   caaaactgtctgtcttgttg 181
             ||||||||||||||||||||
Sbjct: 10674 caaaactgtctgtcttgttg 10693

>gb|AC006933.3|AC006933 Drosophila melanogaster, chromosome 3L, region 73B7-73D6, BAC clone
              BACR48E21, complete sequence
          Length = 186002

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttataaatttacaatgccgg 39
              ||||||||||||||||||||
Sbjct: 134445 ttataaatttacaatgccgg 134426

>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete
              sequence
          Length = 281100

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ttataaatttacaatgccgg 39
              ||||||||||||||||||||
Sbjct: 181649 ttataaatttacaatgccgg 181668


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,295,412
Number of Sequences: 3902068
Number of extensions: 3295412
Number of successful extensions: 51049
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50991
Number of HSP's gapped (non-prelim): 58
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)