>gb|AF030767.1| Sebastes umbrosus cytochrome b (cyt-b) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 782

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF030766.1| Sebastes spinorbis cytochrome b (cyt-b) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 782

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF030765.1| Sebastes exsul cytochrome b (cyt-b) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 782

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF030761.1| Sebastes notius cytochrome b (cyt-b) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 782

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF030758.1| Sebastes ensifer cytochrome b (cyt-b) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 782

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF030717.1| Sebastes babcocki cytochrome b (cyt-b) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 782

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF031516.1|AF031516 Sebastes umbrosus cytochrome b (cytb) gene, complete cds; and
           tRNA-Thr and tRNA-Pro genes, complete sequence;
           mitochondrial genes for mitochondrial products
          Length = 1624

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF031515.1|AF031515 Sebastes spinorbis cytochrome b (cytb) gene, complete cds; and
           tRNA-Thr and tRNA-Pro genes, complete sequence;
           mitochondrial genes for mitochondrial products
          Length = 1623

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF031514.1|AF031514 Sebastes exsul cytochrome b (cytb) gene, complete cds; and tRNA-Thr
           and tRNA-Pro genes, complete sequence; mitochondrial
           genes for mitochondrial products
          Length = 1623

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF031510.1|AF031510 Sebastes notius cytochrome b (cytb) gene, complete cds; and
           tRNA-Thr and tRNA-Pro genes, complete sequence;
           mitochondrial genes for mitochondrial products
          Length = 1623

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>gb|AF031507.1|AF031507 Sebastes ensifer cytochrome b (cytb) gene, complete cds; and
           tRNA-Thr and tRNA-Pro genes, complete sequence;
           mitochondrial genes for mitochondrial products
          Length = 1623

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 570 tgcaattacaaaggggaacaaaaagt 545

>dbj|AB096126.1| Sebastes scythropus mitochondrial cytb gene for cytochrome b,
           partial cds
          Length = 751

 Score = 44.1 bits (22), Expect = 0.060
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 26  tgcaattgcaaaggggaacaaaaagt 51
           ||||||| ||||||||||||||||||
Sbjct: 562 tgcaattacaaaggggaacaaaaagt 537

>gb|AF030741.1| Sebastes rufus cytochrome b (cyt-b) gene, mitochondrial gene
           encoding mitochondrial protein, partial cds
          Length = 782

 Score = 42.1 bits (21), Expect = 0.24
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 27  gcaattgcaaaggggaacaaaaagt 51
           |||||| ||||||||||||||||||
Sbjct: 569 gcaattacaaaggggaacaaaaagt 545

>gb|AC124419.4| Mus musculus BAC clone RP24-319P11 from chromosome 18, complete
             sequence
          Length = 140103

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aacaaaaagtaccaatcaca 61
             ||||||||||||||||||||
Sbjct: 81449 aacaaaaagtaccaatcaca 81468

>gb|AC101833.14| Mus musculus chromosome 1, clone RP24-496H15, complete sequence
          Length = 167684

 Score = 40.1 bits (20), Expect = 0.93
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    accaacaagccgttgcaatt 32
             ||||||||||||||||||||
Sbjct: 89675 accaacaagccgttgcaatt 89656

>gb|AC151710.1| Pan troglodytes chromosome X clone PTB-084K12 map human ortholog q23,
              complete sequence
          Length = 174741

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     aagtaccaatcacatgaaa 66
              |||||||||||||||||||
Sbjct: 119560 aagtaccaatcacatgaaa 119578

>emb|Z74036.2|CEF55C10 Caenorhabditis elegans Cosmid F55C10, complete sequence
          Length = 22151

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 58   cacatgaaaaacggaacaa 76
            |||||||||||||||||||
Sbjct: 9353 cacatgaaaaacggaacaa 9335

>emb|AL139095.15| Human DNA sequence from clone RP11-69L16 on chromosome 6 Contains the
             3' end of the RREB1 gene for ras responsive element
             binding protein 1, part of a novel gene, the SSR1 gene for
             signal sequence receptor alpha (translocon-associated
             protein alpha), the ATP5GP1 pseudogene (ATPsynthase, H+
             transporting, mitochondrial F0 complex, subunit c (subunit
             9)), a ribosomal protein S3 pseudogene, the CAGE1 gene for
             cancer antigen 1, the 5' end of the RIOK1 gene for RIO
             kinase 1 (yeast) and three CpG islands, complete sequence
          Length = 167206

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 34    caaaggggaacaaaaagtaccaa 56
             ||||| |||||||||||||||||
Sbjct: 12550 caaagaggaacaaaaagtaccaa 12528

>emb|AL157369.7| Human DNA sequence from clone RP11-528D24 on chromosome 13 Contains the
             SUCLA2 gene for succinate-CoA ligase, ADP-forming, beta
             subunit (A-BETA), a novel gene and a CpG island, complete
             sequence
          Length = 83827

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 34    caaaggggaacaaaaagta 52
             |||||||||||||||||||
Sbjct: 64857 caaaggggaacaaaaagta 64839

>emb|AL117326.5|HSDJ944N9 Human DNA sequence from clone RP5-944N9 on chromosome Xq22.3-23
             Contains part of the PAK3 gene for p21 (CDKN1A)-activated
             kinase 3 and a pseudogene similar to part of chromosome 14
             open reading frame 111 (C14orf111), complete sequence
          Length = 82394

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 48    aagtaccaatcacatgaaa 66
             |||||||||||||||||||
Sbjct: 49209 aagtaccaatcacatgaaa 49227

>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 42      aacaaaaagtaccaatcac 60
               |||||||||||||||||||
Sbjct: 1166026 aacaaaaagtaccaatcac 1166044

>gb|AC112227.4| Homo sapiens BAC clone RP13-552G12 from 4, complete sequence
          Length = 151609

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     caaaggggaacaaaaagta 52
              |||||||||||||||||||
Sbjct: 126310 caaaggggaacaaaaagta 126328

>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 38.2 bits (19), Expect = 3.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 30      attgcaaaggggaacaaaaagta 52
               ||||||||||||| |||||||||
Sbjct: 1347540 attgcaaaggggagcaaaaagta 1347562


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 711,565
Number of Sequences: 3902068
Number of extensions: 711565
Number of successful extensions: 49336
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49298
Number of HSP's gapped (non-prelim): 38
length of query: 87
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 66
effective length of database: 17,151,101,840
effective search space: 1131972721440
effective search space used: 1131972721440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)