ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet116b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
2dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
3dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 135 1e-28
4emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 133 4e-28
5gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (T... 115 1e-22
6emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransgly... 96 9e-17
7gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase ... 88 2e-14
8gb|AY103775.1| Zea mays PCO076979 mRNA sequence 86 9e-14
9emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 80 6e-12
10gb|AY103891.1| Zea mays PCO065722 mRNA sequence 80 6e-12
11gb|BT014685.1| Oryza sativa AK104912 mRNA sequence 72 1e-09
12dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
13dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
14dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
15dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
16gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence 66 8e-08
17gb|AY106776.1| Zea mays PCO076978 mRNA sequence 64 3e-07
18dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 56 8e-05
19ref|NM_125137.2| Arabidopsis thaliana TCH4 (TOUCH 4); hydrolase,... 50 0.005
20gb|AF446881.1|AF446881 Arabidopsis thaliana AT5g57560/MUA2_13 mR... 50 0.005
21gb|AY055102.1| Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, comp... 50 0.005
22dbj|AK220646.1| Arabidopsis thaliana mRNA for hypothetical prote... 50 0.005
23gb|AY052712.1| Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, comp... 50 0.005
24gb|AF367262.1|AF367262 Arabidopsis thaliana AT5g57560/MUA2_13 mR... 50 0.005
25dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 50 0.005
26gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan trans... 50 0.005
27gb|AF051338.1|AF051338 Arabidopsis thaliana xyloglucan endotrans... 50 0.005
28gb|U27609.1|ATU27609 Arabidopsis thaliana xyloglucan endo-transg... 50 0.005
29emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan end... 46 0.077
30gb|DQ100340.1| Eucalyptus globulus putative xyloglucan endotrans... 46 0.077
31gb|AY105365.1| Zea mays PCO092487 mRNA sequence 46 0.077
32gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase h... 46 0.077
33gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase h... 46 0.077
34ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANS... 44 0.30
35ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predic... 44 0.30
36gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, comp... 44 0.30
37emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 44 0.30
38gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, comp... 44 0.30
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.30
40dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.30
41gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransgl... 44 0.30
42ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group... 42 1.2
43ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.2
44ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predic... 42 1.2
45gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase m... 42 1.2
46dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
47dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
48emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Co... 42 1.2
49dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mR... 42 1.2
50dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
51dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
52dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
53dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
54dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
55gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence 40 4.8
56gb|AC161535.5| Mus musculus chromosome 5, clone RP23-26J13, comp... 40 4.8
57emb|AL590546.7| Human DNA sequence from clone RP11-402O5 on chro... 40 4.8
58gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, c... 40 4.8
59emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in ... 40 4.8
60gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex B... 40 4.8
61dbj|AB113109.1| Aotus trivirgatus Aotr-B1 gene for MHC class I a... 40 4.8
62dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
63gb|AY106262.1| Zea mays PCO111648 mRNA sequence 40 4.8
64dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 4.8
65gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated pro... 40 4.8 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  135 bits (68), Expect = 1e-28
 Identities = 86/92 (93%)
 Strand = Plus / Plus

                                                                            
Query: 267      acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 326
                |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| |
Sbjct: 28773068 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 28773127

                                                
Query: 327      agatcatgtagttgctctgcacccaccgcatc 358
                |||||||||| |||||||||||||||||||||
Sbjct: 28773128 agatcatgtacttgctctgcacccaccgcatc 28773159



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                            
Query: 274      gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
                |||||||||||||  |||||| | ||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 28750683 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 28750624

                                    
Query: 334      gtagttgctctgcacccacc 353
                | | || |||||||||||||
Sbjct: 28750623 gaacttcctctgcacccacc 28750604



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 310      gtcggtgcagtagttatagatcatgtagttgctctgcacc 349
                ||||| |||||| || |||||||||||||  |||||||||
Sbjct: 28762663 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 28762624
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score =  135 bits (68), Expect = 1e-28
 Identities = 86/92 (93%)
 Strand = Plus / Plus

                                                                         
Query: 267   acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 326
             |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| |
Sbjct: 80843 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 80902

                                             
Query: 327   agatcatgtagttgctctgcacccaccgcatc 358
             |||||||||| |||||||||||||||||||||
Sbjct: 80903 agatcatgtacttgctctgcacccaccgcatc 80934



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                         
Query: 274   gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
             |||||||||||||  |||||| | ||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 58458 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 58399

                                 
Query: 334   gtagttgctctgcacccacc 353
             | | || |||||||||||||
Sbjct: 58398 gaacttcctctgcacccacc 58379



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 310   gtcggtgcagtagttatagatcatgtagttgctctgcacc 349
             ||||| |||||| || |||||||||||||  |||||||||
Sbjct: 70438 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 70399
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>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score =  135 bits (68), Expect = 1e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                       
Query: 267 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 326
           |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| |
Sbjct: 989 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 930

                                           
Query: 327 agatcatgtagttgctctgcacccaccgcatc 358
           |||||||||| |||||||||||||||||||||
Sbjct: 929 agatcatgtacttgctctgcacccaccgcatc 898
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>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEA)
          Length = 1174

 Score =  133 bits (67), Expect = 4e-28
 Identities = 91/99 (91%)
 Strand = Plus / Minus

                                                                       
Query: 260 ggggactacatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcag 319
           ||||||||||||||||||||||||||||||||||  ||||  ||||||||||| ||||||
Sbjct: 932 ggggactacatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcag 873

                                                  
Query: 320 tagttatagatcatgtagttgctctgcacccaccgcatc 358
           ||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 872 tagttgtagatcatgtaattgctctgtacccaccgcatc 834



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 150  atacagacacccccatcttccctat 174
            |||||||| ||||||||||||||||
Sbjct: 1026 atacagacgcccccatcttccctat 1002
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>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to
           marker R11, genomic sequence
          Length = 224

 Score =  115 bits (58), Expect = 1e-22
 Identities = 76/82 (92%)
 Strand = Plus / Minus

                                                                       
Query: 267 acatggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttat 326
           |||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||| |
Sbjct: 82  acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 23

                                 
Query: 327 agatcatgtagttgctctgcac 348
           |||||||||| |||||||||||
Sbjct: 22  agatcatgtacttgctctgcac 1
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>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 95.6 bits (48), Expect = 9e-17
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           |||||||||||| |||||||| || |  ||||||||||||||||||||||| ||||||||
Sbjct: 958 gcactcggcgggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 899

                                   
Query: 334 gtagttgctctgcacccaccgcat 357
           | | || |||||||||||||||||
Sbjct: 898 gaacttcctctgcacccaccgcat 875
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>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA,
           complete cds
          Length = 1056

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 74/84 (88%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           ||||||||| || |||||||| || |  ||||||||||||||||||||||| ||||||||
Sbjct: 855 gcactcggcaggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 796

                                   
Query: 334 gtagttgctctgcacccaccgcat 357
           | | || |||||||||||||||||
Sbjct: 795 gaacttcctctgcacccaccgcat 772
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>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 80/91 (87%), Gaps = 1/91 (1%)
 Strand = Plus / Minus

                                                                        
Query: 268  catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 327
            |||||||||||||||||||| ||| ||   | | ||||||||||||||||||||||| ||
Sbjct: 1027 catggagcactcggcggggaggcc-tgctggtagcgcttggggtcggtgcagtagttgta 969

                                           
Query: 328  gatcatgtagttgctctgcacccaccgcatc 358
            ||||||||| |||| ||||||||| ||||||
Sbjct: 968  gatcatgtacttgcgctgcacccagcgcatc 938
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>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           |||||||||||||| |||||  || |  ||||||||||||||||||||||| ||||||||
Sbjct: 975 gcactcggcggggaggccctctgctacgcgcttggggtcggtgcagtagttgtagatcat 916

                                   
Query: 334 gtagttgctctgcacccaccgcat 357
           | | || ||||||||||| |||||
Sbjct: 915 gaacttcctctgcacccagcgcat 892
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>gb|AY103891.1| Zea mays PCO065722 mRNA sequence
          Length = 1280

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           |||||||||||| |||||||| | ||| ||||||| ||||| ||||||||| ||||||||
Sbjct: 995 gcactcggcgggcacgccctgcgggaagcgcttggcgtcggcgcagtagttgtagatcat 936

                                   
Query: 334 gtagttgctctgcacccaccgcat 357
           | | |||| ||||||||| |||||
Sbjct: 935 gaacttgcgctgcacccagcgcat 912
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>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence
          Length = 807

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           |||||||||||||  |||||| | ||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 795 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 736

                               
Query: 334 gtagttgctctgcacccacc 353
           | | || |||||||||||||
Sbjct: 735 gaacttcctctgcacccacc 716
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                          
Query: 274    gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
              |||||||||||||  |||||| | ||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 151249 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 151190

                                  
Query: 334    gtagttgctctgcacccacc 353
              | | || |||||||||||||
Sbjct: 151189 gaacttcctctgcacccacc 151170



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                      
Query: 310    gtcggtgcagtagttatagatcatgtagttgctctgcacc 349
              ||||| |||||| || |||||||||||||  |||||||||
Sbjct: 163229 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 163190
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>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
           insert sequence
          Length = 1208

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           |||||||||||||  |||||| | ||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916

                               
Query: 334 gtagttgctctgcacccacc 353
           | | || |||||||||||||
Sbjct: 915 gaacttcctctgcacccacc 896
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>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
           insert sequence
          Length = 1208

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           |||||||||||||  |||||| | ||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 975 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 916

                               
Query: 334 gtagttgctctgcacccacc 353
           | | || |||||||||||||
Sbjct: 915 gaacttcctctgcacccacc 896
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>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full
           insert sequence
          Length = 634

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 274 gcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatcat 333
           |||||||||||||  |||||| | ||| ||||||| ||| ||||||||||| ||||||||
Sbjct: 401 gcactcggcgggggtgccctgggggaaccgcttggcgtcagtgcagtagttgtagatcat 342

                               
Query: 334 gtagttgctctgcacccacc 353
           | | || |||||||||||||
Sbjct: 341 gaacttcctctgcacccacc 322
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>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence
          Length = 977

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 60/69 (86%)
 Strand = Plus / Plus

                                                                       
Query: 289 gccctgagcgaaacgcttggggtcggtgcagtagttatagatcatgtagttgctctgcac 348
           |||||| | ||| ||||||| ||||||||||||||| ||||||||| | || ||||||||
Sbjct: 250 gccctgcgggaaccgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcac 309

                    
Query: 349 ccaccgcat 357
           ||| |||||
Sbjct: 310 ccagcgcat 318
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>gb|AY106776.1| Zea mays PCO076978 mRNA sequence
          Length = 974

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 302 cgcttggggtcggtgcagtagttatagatcatgtagttgctctgcacccaccgcat 357
           ||||||| ||||||||||||||| ||||||||| | || ||||||||||| |||||
Sbjct: 941 cgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcacccagcgcat 886
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>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 314  gtgcagtagttatagatcatgtagttgctctgcacccaccgcat 357
            ||||||||||| |||||||||| ||||| ||||||||| |||||
Sbjct: 1061 gtgcagtagttgtagatcatgtggttgcgctgcacccagcgcat 1018
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>ref|NM_125137.2| Arabidopsis thaliana TCH4 (TOUCH 4); hydrolase, acting on glycosyl
           bonds / hydrolase, hydrolyzing O-glycosyl compounds
           AT5G57560 (TCH4) mRNA, complete cds
          Length = 1067

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 840 ttatagatcatgtagttcctctgcaccca 812
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>gb|AF446881.1|AF446881 Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds
          Length = 855

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 794 ttatagatcatgtagttcctctgcaccca 766
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>gb|AY055102.1| Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds
          Length = 855

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 794 ttatagatcatgtagttcctctgcaccca 766
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>dbj|AK220646.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL21-63-O10
          Length = 607

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 88  ttatagatcatgtagttcctctgcaccca 116
to top
>gb|AY052712.1| Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds
          Length = 1061

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 840 ttatagatcatgtagttcctctgcaccca 812
to top
>gb|AF367262.1|AF367262 Arabidopsis thaliana AT5g57560/MUA2_13 mRNA, complete cds
          Length = 994

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 840 ttatagatcatgtagttcctctgcaccca 812
to top
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2
          Length = 83478

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 323   ttatagatcatgtagttgctctgcaccca 351
             ||||||||||||||||| |||||||||||
Sbjct: 38298 ttatagatcatgtagttcctctgcaccca 38326



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 320   tagttatagatcatgtagttgctctgcacc 349
             ||||||||||||||||| || |||||||||
Sbjct: 36051 tagttatagatcatgtacttcctctgcacc 36080
to top
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene,
           complete cds
          Length = 2703

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 145 ttatagatcatgtagttcctctgcaccca 117



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 320  tagttatagatcatgtagttgctctgcacc 349
            ||||||||||||||||| || |||||||||
Sbjct: 2392 tagttatagatcatgtacttcctctgcacc 2363
to top
>gb|AF051338.1|AF051338 Arabidopsis thaliana xyloglucan endotransglycosylase related
           protein (TCH4) mRNA, complete cds
          Length = 1016

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 794 ttatagatcatgtagttcctctgcaccca 766
to top
>gb|U27609.1|ATU27609 Arabidopsis thaliana xyloglucan endo-transglycosylase (TCH4) gene,
           complete cds
          Length = 1141

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 323 ttatagatcatgtagttgctctgcaccca 351
           ||||||||||||||||| |||||||||||
Sbjct: 928 ttatagatcatgtagttcctctgcaccca 900
to top
>emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan endotransglycosylase 1
          Length = 1223

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 302 cgcttggggtcggtgcagtagttatagatcatgtagttgctctgcacccac 352
           ||||||| ||| ||||| |||||||| |||||||| ||  |||||||||||
Sbjct: 873 cgcttggtgtctgtgcaatagttataaatcatgtaatttttctgcacccac 823
to top
>gb|DQ100340.1| Eucalyptus globulus putative xyloglucan
           endotransglycosylase/hydrolase (XTH4) mRNA, partial cds
          Length = 608

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 302 cgcttggggtcggtgcagtagttatagatcatgtagttgctctgcacccac 352
           ||||||| ||||| ||||||||| || |||||||| ||  |||||||||||
Sbjct: 397 cgcttggtgtcggcgcagtagttgtatatcatgtaattcttctgcacccac 347
to top
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence
          Length = 1253

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 311 tcggtgcagtagttatagatcatgtag 337
           |||||||||||||| ||||||||||||
Sbjct: 901 tcggtgcagtagttgtagatcatgtag 875
to top
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete
           cds
          Length = 1827

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 311 tcggtgcagtagttatagatcatgtag 337
           |||||||||||||| ||||||||||||
Sbjct: 916 tcggtgcagtagttgtagatcatgtag 890
to top
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete
           cds
          Length = 1221

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 311 tcggtgcagtagttatagatcatgtag 337
           |||||||||||||| ||||||||||||
Sbjct: 908 tcggtgcagtagttgtagatcatgtag 882
to top
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3);
           hydrolase, acting on glycosyl bonds AT5G57550 (XTR3)
           mRNA, complete cds
          Length = 1059

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 320 tagttatagatcatgtagttgctctgcacc 349
           ||||||||||||||||| || |||||||||
Sbjct: 837 tagttatagatcatgtacttcctctgcacc 808
to top
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 882

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 307 ggggtcggtgcagtagttatagatcatgta 336
           ||||||| |||||||||| |||||||||||
Sbjct: 837 ggggtcgttgcagtagttgtagatcatgta 808
to top
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds
          Length = 855

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 320 tagttatagatcatgtagttgctctgcacc 349
           ||||||||||||||||| || |||||||||
Sbjct: 800 tagttatagatcatgtacttcctctgcacc 771
to top
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 307    ggggtcggtgcagtagttatagatcatgta 336
              ||||||| |||||||||| |||||||||||
Sbjct: 141156 ggggtcgttgcagtagttgtagatcatgta 141185



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                          
Query: 268    catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 327
              ||||||||||||||  |||| |||||| | ||| ||||||  ||||| ||||||||  ||
Sbjct: 149761 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 149820

                           
Query: 328    gatcatgtagttg 340
               | ||||||||||
Sbjct: 149821 caccatgtagttg 149833
to top
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds
          Length = 1060

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 320 tagttatagatcatgtagttgctctgcacc 349
           ||||||||||||||||| || |||||||||
Sbjct: 837 tagttatagatcatgtacttcctctgcacc 808
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 307      ggggtcggtgcagtagttatagatcatgta 336
                ||||||| |||||||||| |||||||||||
Sbjct: 30507779 ggggtcgttgcagtagttgtagatcatgta 30507808



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                            
Query: 268      catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 327
                ||||||||||||||  |||| |||||| | ||| ||||||  ||||| ||||||||  ||
Sbjct: 30516384 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 30516443

                             
Query: 328      gatcatgtagttg 340
                 | ||||||||||
Sbjct: 30516444 caccatgtagttg 30516456
to top
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
           insert sequence
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 307 ggggtcggtgcagtagttatagatcatgta 336
           ||||||| |||||||||| |||||||||||
Sbjct: 900 ggggtcgttgcagtagttgtagatcatgta 871
to top
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related
           protein (XTR3) mRNA, 3' end, partial cds
          Length = 1017

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 320 tagttatagatcatgtagttgctctgcacc 349
           ||||||||||||||||| || |||||||||
Sbjct: 779 tagttatagatcatgtacttcctctgcacc 750
to top
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA
          Length = 1127

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 273 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 332
           ||||||||||||||| |||||| | ||| |||  |  ||||| ||||||||| |||  ||
Sbjct: 905 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 846

                    
Query: 333 tgtagttgc 341
           |||||||||
Sbjct: 845 tgtagttgc 837
to top
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 273 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 332
           ||||||||||||||| |||||| | ||| |||  |  ||||| ||||||||| |||  ||
Sbjct: 910 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 851

                    
Query: 333 tgtagttgc 341
           |||||||||
Sbjct: 850 tgtagttgc 842
to top
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 822

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 268 catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 327
           ||||||||||||||  |||| |||||| | ||| ||||||  ||||| ||||||||  ||
Sbjct: 816 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 757

                        
Query: 328 gatcatgtagttg 340
            | ||||||||||
Sbjct: 756 caccatgtagttg 744
to top
>gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase mRNA, partial cds
          Length = 494

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 311 tcggtgcagtagttatagatcatgt 335
           |||||||||||||| ||||||||||
Sbjct: 494 tcggtgcagtagttgtagatcatgt 470
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 337     gttgctctgcacccaccgcat 357
               |||||||||||||||||||||
Sbjct: 4951257 gttgctctgcacccaccgcat 4951237
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                           
Query: 273     agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 332
               ||||||||||||||| |||||| | ||| |||  |  ||||| ||||||||| |||  ||
Sbjct: 8322676 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 8322617

                        
Query: 333     tgtagttgc 341
               |||||||||
Sbjct: 8322616 tgtagttgc 8322608
to top
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1025

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 320 tagttatagatcatgtagttgctctgcac 348
           ||||||||||||||||| || ||||||||
Sbjct: 814 tagttatagatcatgtacttcctctgcac 786
to top
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan
           endotransglycosylase-related protein 5, complete cds
          Length = 1280

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 273 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 332
           ||||||||||||||| |||||| | ||| |||  |  ||||| ||||||||| |||  ||
Sbjct: 901 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 842

                    
Query: 333 tgtagttgc 341
           |||||||||
Sbjct: 841 tgtagttgc 833
to top
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1012G11
          Length = 167168

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 337    gttgctctgcacccaccgcat 357
              |||||||||||||||||||||
Sbjct: 133789 gttgctctgcacccaccgcat 133769
to top
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0682A06
          Length = 142023

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 273   agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 332
             ||||||||||||||| |||||| | ||| |||  |  ||||| ||||||||| |||  ||
Sbjct: 62785 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 62726

                      
Query: 333   tgtagttgc 341
             |||||||||
Sbjct: 62725 tgtagttgc 62717
to top
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full
           insert sequence
          Length = 1111

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 273 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 332
           ||||||||||||||| |||||| | ||| |||  |  ||||| ||||||||| |||  ||
Sbjct: 910 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 851

                    
Query: 333 tgtagttgc 341
           |||||||||
Sbjct: 850 tgtagttgc 842
to top
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full
           insert sequence
          Length = 1109

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 268 catggagcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttata 327
           ||||||||||||||  |||| |||||| | ||| ||||||  ||||| ||||||||  ||
Sbjct: 906 catggagcactcgggcgggaagccctgcgggaaccgcttgctgtcggcgcagtagtcgta 847

                        
Query: 328 gatcatgtagttg 340
            | ||||||||||
Sbjct: 846 caccatgtagttg 834
to top
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full
           insert sequence
          Length = 1127

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                       
Query: 273 agcactcggcggggacgccctgagcgaaacgcttggggtcggtgcagtagttatagatca 332
           ||||||||||||||| |||||| | ||| |||  |  ||||| ||||||||| |||  ||
Sbjct: 905 agcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgtaggaca 846

                    
Query: 333 tgtagttgc 341
           |||||||||
Sbjct: 845 tgtagttgc 837
to top
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence
          Length = 781

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 271 ggagcactcggcggggacgccctg 294
           ||||||||||||||||| ||||||
Sbjct: 503 ggagcactcggcggggaagccctg 480
to top
>gb|AC161535.5| Mus musculus chromosome 5, clone RP23-26J13, complete sequence
          Length = 209259

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    actaatcattattgatttcc 140
              ||||||||||||||||||||
Sbjct: 129064 actaatcattattgatttcc 129045
to top
>emb|AL590546.7| Human DNA sequence from clone RP11-402O5 on chromosome 6, complete
             sequence
          Length = 72962

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    gacaaacaagaatttaccac 95
             ||||||||||||||||||||
Sbjct: 53786 gacaaacaagaatttaccac 53805
to top
>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence
          Length = 195538

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   agacacccccatcttcccta 173
             ||||||||||||||||||||
Sbjct: 74787 agacacccccatcttcccta 74768
to top
>emb|BX324186.12| Zebrafish DNA sequence from clone DKEY-18B8 in linkage group 17, complete
              sequence
          Length = 153540

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    cagtgcaatgctagcagctg 230
              ||||||||||||||||||||
Sbjct: 108572 cagtgcaatgctagcagctg 108591
to top
>gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex BAC MMU188J04, complete
             sequence
          Length = 166821

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   gggactacatggagcactcg 280
             ||||||||||||||||||||
Sbjct: 22059 gggactacatggagcactcg 22040
to top
>dbj|AB113109.1| Aotus trivirgatus Aotr-B1 gene for MHC class I antigen, partial cds
            and promoter region
          Length = 3861

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 257  catggggactacatggagcactcg 280
            |||||||||| |||||||||||||
Sbjct: 2660 catggggactgcatggagcactcg 2683
to top
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full
           insert sequence
          Length = 1101

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 310 gtcggtgcagtagttatagatcatgtagttgctctgcacc 349
           ||||| |||||| || |||||||||||||  |||||||||
Sbjct: 895 gtcggcgcagtaattgtagatcatgtagtccctctgcacc 856
to top
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 271 ggagcactcggcggggacgccctg 294
           ||||||||||||||||| ||||||
Sbjct: 981 ggagcactcggcggggaagccctg 958
to top
>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108,
             complete sequence
          Length = 117124

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   tgcagtagttatagatcatg 334
             ||||||||||||||||||||
Sbjct: 90697 tgcagtagttatagatcatg 90716
to top
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds
          Length = 1063

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 315 tgcagtagttatagatcatg 334
           ||||||||||||||||||||
Sbjct: 828 tgcagtagttatagatcatg 809


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,250,205
Number of Sequences: 3902068
Number of extensions: 2250205
Number of successful extensions: 36407
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 36267
Number of HSP's gapped (non-prelim): 139
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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