ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet116a09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127036 agccctttgaagctgctgctgccctcactgaggttgtgaga 127076
>gb|AF272860.1| Oryza sativa receptor-like kinase Xa21-binding protein 3 (Xb3) mRNA, complete cds Length = 1353 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 agccctttgaagctgctgctgccctcactgaggttgtgaga 1213
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 609637 agccctttgaagctgctgctgccctcactgaggttgtgaga 609677 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 16090720 tttctcttttctctcttctc 16090701
>dbj|AK107650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F11, full insert sequence Length = 2766 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 agccctttgaagctgctgctgccctcactgaggttgtgaga 1294
>dbj|AK105930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B01, full insert sequence Length = 1781 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 agccctttgaagctgctgctgccctcactgaggttgtgaga 1211
>dbj|AK105623.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C08, full insert sequence Length = 2187 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1331 agccctttgaagctgctgctgccctcactgaggttgtgaga 1291
>dbj|AK102800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108E06, full insert sequence Length = 2017 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1356 agccctttgaagctgctgctgccctcactgaggttgtgaga 1316
>dbj|AK059322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H09, full insert sequence Length = 1474 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 325 agccctttgaagctgctgctgccctcactgaggttgtgaga 365 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 agccctttgaagctgctgctgccctcactgaggttgtgaga 903
>gb|AC115111.2| Homo sapiens BAC clone RP11-286J9 from 4, complete sequence Length = 113684 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Minus Query: 329 ctttgaagctgctgctgccctcac 352 |||||||||||||||||||||||| Sbjct: 94634 ctttgaagctgctgctgccctcac 94611
>gb|AC102892.9| Mus musculus chromosome 5, clone RP24-362B10, complete sequence Length = 158043 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 tttttctcttttctctcttctc 153 |||||||||||||||||||||| Sbjct: 126642 tttttctcttttctctcttctc 126621
>gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, complete sequence Length = 226006 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 tttttctcttttctctcttctc 153 |||||||||||||||||||||| Sbjct: 86098 tttttctcttttctctcttctc 86077
>gb|AC112962.15| Mus musculus chromosome 19, clone RP24-74N6, complete sequence Length = 182999 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttctc 153 |||||||||||||||||||||| Sbjct: 56367 tttttctcttttctctcttctc 56388
>gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome 10, complete sequence Length = 268516 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Plus Query: 131 atttttctcttttctctcttctcatc 156 |||||||||||||||||||| ||||| Sbjct: 221246 atttttctcttttctctcttttcatc 221271
>gb|AC122412.4| Mus musculus BAC clone RP24-144P12 from chromosome 10, complete sequence Length = 154472 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 131 atttttctcttttctctcttctcatc 156 |||||||||||||||||||| ||||| Sbjct: 72790 atttttctcttttctctcttttcatc 72765
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an H+ transporting ATP synthase mitochondrial F0 complex subunit g (Atp5l) pseudogene, a ferritin light chain 1 (Ftl1) pseudogene, three novel genes, the gene for a novel ENTH domain containing protein, the 5' end of the Sox30 gene for SRY-box containing gene 30 and three Cpg islands, complete sequence Length = 207877 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 122 cttccatggatttttctctttt 143 |||||||||||||||||||||| Sbjct: 137687 cttccatggatttttctctttt 137666
>gb|AC157916.2| Mus musculus chromosome 19, clone RP24-330P23, complete sequence Length = 190666 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 tttttctcttttctctcttctc 153 |||||||||||||||||||||| Sbjct: 36633 tttttctcttttctctcttctc 36612
>gb|AC011742.3| Homo sapiens BAC clone RP11-214J9 from 2, complete sequence Length = 181210 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttctc 153 |||||||||||||||||||||| Sbjct: 33160 tttttctcttttctctcttctc 33181
>gb|AC119967.11| Mus musculus chromosome 10, clone RP24-473K14, complete sequence Length = 196661 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 132 tttttctcttttctctcttctc 153 |||||||||||||||||||||| Sbjct: 84519 tttttctcttttctctcttctc 84498
>gb|AC119237.17| Mus musculus chromosome 9, clone RP24-228P8, complete sequence Length = 177661 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 agacagacaaaaggatgggtg 86 ||||||||||||||||||||| Sbjct: 58697 agacagacaaaaggatgggtg 58677
>gb|AC162176.2| Mus musculus BAC clone RP24-446P15 from chromosome 9, complete sequence Length = 204098 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 agacagacaaaaggatgggtg 86 ||||||||||||||||||||| Sbjct: 193640 agacagacaaaaggatgggtg 193620
>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAb0050G15, complete sequence Length = 126156 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 67737 ttttctcttttctctcttctc 67757
>gb|AC147331.3| Pan troglodytes BAC clone RP43-10H17 from 7, complete sequence Length = 189220 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ccatggatttttctcttttct 145 ||||||||||||||||||||| Sbjct: 158089 ccatggatttttctcttttct 158069
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23 complete sequence Length = 179327 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 131 atttttctcttttctctcttctcat 155 |||||| |||||||||||||||||| Sbjct: 71116 atttttttcttttctctcttctcat 71092
>gb|AC134586.4| Mus musculus BAC clone RP23-304K3 from chromosome 9, complete sequence Length = 166474 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 10647 ttttctcttttctctcttctc 10667 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 10574 ttttctcttttctctcttctc 10594
>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence Length = 184795 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 tggatttttctcttttctctc 148 ||||||||||||||||||||| Sbjct: 51266 tggatttttctcttttctctc 51246
>gb|AC125357.4| Mus musculus BAC clone RP23-235J18 from chromosome 9, complete sequence Length = 217511 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 167720 ttttctcttttctctcttctc 167740
>emb|CR356234.11| Zebrafish DNA sequence from clone CH211-93J11 in linkage group 2, complete sequence Length = 151567 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 216 tgtgctctgccttggtcacag 236 ||||||||||||||||||||| Sbjct: 45769 tgtgctctgccttggtcacag 45749
>gb|AC132569.3| Mus musculus BAC clone RP24-486E21 from chromosome 8, complete sequence Length = 172340 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 86324 ttttctcttttctctcttctc 86304
>gb|AC124380.4| Mus musculus BAC clone RP24-404N12 from chromosome 8, complete sequence Length = 149620 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 58057 ttttctcttttctctcttctc 58077
>gb|AC127413.3| Mus musculus BAC clone RP23-236A4 from 15, complete sequence Length = 194448 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 167666 ttttctcttttctctcttctc 167646
>gb|AC092666.2| Homo sapiens BAC clone RP11-545G3 from 7, complete sequence Length = 136934 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 48758 ttttctcttttctctcttctc 48738
>gb|AC006019.2| Homo sapiens PAC clone RP5-1048B16 from 7, complete sequence Length = 124615 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 91491 ttttctcttttctctcttctc 91471
>gb|AC113497.6| Mus musculus chromosome 10, clone RP23-365G13, complete sequence Length = 218508 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 87661 ttttctcttttctctcttctc 87681
>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209149 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 24162 ttttctcttttctctcttctc 24142
>gb|AC142289.1| Pan troglodytes BAC clone RP43-179F19 from 7, complete sequence Length = 182617 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 ccatggatttttctcttttct 145 ||||||||||||||||||||| Sbjct: 182272 ccatggatttttctcttttct 182292
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 cgctgtcggccatcctgctcg 292 ||||||||||||||||||||| Sbjct: 2890960 cgctgtcggccatcctgctcg 2890940
>emb|AL450310.18| Human DNA sequence from clone RP11-307O14 on chromosome 6 Contains the 5' end of a novel gene and the gene for MacGAP protein, complete sequence Length = 126495 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 56267 ttttctcttttctctcttctc 56247
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 1581 ttttctcttttctctcttctc 1601
>gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, complete sequence Length = 174164 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 93412 ttttctcttttctctcttctc 93392
>emb|AL663016.5|OSJN00216 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A22, complete sequence Length = 131489 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 53539 ttttctcttttctctcttctc 53519
>emb|AL451015.1|NCB13O20 Neurospora crassa DNA linkage group V BAC clone B13O20 Length = 65076 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 acagacaaaaggatgggtggaaatg 92 ||||||||||||| ||||||||||| Sbjct: 1907 acagacaaaaggaggggtggaaatg 1931
>emb|AL513445.1|NCB7A16 Neurospora crassa DNA linkage group V BAC clone B7A16 Length = 74014 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 acagacaaaaggatgggtggaaatg 92 ||||||||||||| ||||||||||| Sbjct: 923 acagacaaaaggaggggtggaaatg 899
>gb|AC153988.5| Mus musculus 6 BAC RP24-553I1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 136725 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 77555 ttttctcttttctctcttctc 77575
>gb|AC153914.5| Mus musculus 10 BAC RP23-297H17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 174199 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 7547 ttttctcttttctctcttctc 7527
>dbj|AK081861.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130083B15 product:unclassifiable, full insert sequence Length = 2600 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 386 ttttctcttttctctcttctc 406
>gb|AC073200.6| Homo sapiens BAC clone RP11-261L16 from 7, complete sequence Length = 165929 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 ccatggatttttctcttttct 145 ||||||||||||||||||||| Sbjct: 59716 ccatggatttttctcttttct 59696
>gb|AY035583.1| Mus musculus Na/K-ATPase gamma subunit (Fxyd2) gene, complete cds, alternatively spliced Length = 10216 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 agacagacaaaaggatgggtg 86 ||||||||||||||||||||| Sbjct: 3325 agacagacaaaaggatgggtg 3305
>gb|AC156633.2| Mus musculus BAC clone RP24-421P3 from chromosome 9, complete sequence Length = 175422 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 143559 ttttctcttttctctcttctc 143539
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 18090655 ttttctcttttctctcttctc 18090635 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttc 151 |||||||||||||||||||| Sbjct: 21567005 tttttctcttttctctcttc 21567024
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 6218303 ttttctcttttctctcttctc 6218323
>gb|AC135069.17| Homo sapiens chromosome 15, clone RP11-1081C20, complete sequence Length = 222726 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 190008 ttttctcttttctctcttctc 189988
>gb|AC116165.7| Homo sapiens chromosome 15, clone RP11-467N20, complete sequence Length = 181697 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 137027 ttttctcttttctctcttctc 137047
>gb|AC121562.8| Homo sapiens chromosome 15, clone CTD-2024P22, complete sequence Length = 118499 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 115203 ttttctcttttctctcttctc 115223
>gb|AC004050.1|AC004050 Homo sapiens chromosome 4 clone B207D4 map 4q25, complete sequence Length = 127098 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcttttctctcttctcatcat 158 ||||||||||||||||||||| Sbjct: 94055 tcttttctctcttctcatcat 94075
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 6284770 ttttctcttttctctcttctc 6284790
>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete sequence Length = 207495 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 164595 ttttctcttttctctcttctc 164615
>emb|AL807249.8| Mouse DNA sequence from clone RP23-25C1 on chromosome 4, complete sequence Length = 248479 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttctc 153 ||||||||||||||||||||| Sbjct: 82369 ttttctcttttctctcttctc 82349
>gb|AC169984.2| Mus musculus BAC clone RP23-450I9 from chromosome 6, complete sequence Length = 181976 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 152021 ttttctcttttctctcttct 152040
>gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome 9, complete sequence Length = 205289 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 64875 tttctcttttctctcttctc 64894
>gb|AC003953.1| Homo sapiens chromosome 9, P1 clone 8660 (LBNL H105), complete sequence Length = 75871 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 acaggcaagacagacaaaag 78 |||||||||||||||||||| Sbjct: 20366 acaggcaagacagacaaaag 20385
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 41890 tttctcttttctctcttctc 41871
>gb|AC135424.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015F11, complete sequence Length = 177574 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 176469 tttctcttttctctcttctc 176450
>gb|L17432.1|CHKHBBRE Gallus gallus rho-globin, beta-H globin, beta-A globin, epsilon-globin, and olfactory receptor-like protein COR3'beta (COR3'beta) genes, complete cds Length = 30539 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 acccatctgtgtgctctgccttgg 230 |||||| ||||||||||||||||| Sbjct: 22005 acccatgtgtgtgctctgccttgg 22028
>gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, complete sequence Length = 163011 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tacaggcaagacagacaaaa 77 |||||||||||||||||||| Sbjct: 103001 tacaggcaagacagacaaaa 102982
>gb|AC150499.3| Bos taurus BAC CH240-105M18 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 205738 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 atttttctcttttctctctt 150 |||||||||||||||||||| Sbjct: 182695 atttttctcttttctctctt 182714
>gb|AC149223.2| Mus musculus BAC clone RP23-203K1 from chromosome 18, complete sequence Length = 202991 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tacaggcaagacagacaaaa 77 |||||||||||||||||||| Sbjct: 128368 tacaggcaagacagacaaaa 128387
>ref|XM_717477.1| Candida albicans SC5314 hypothetical protein (CaO19_1526), mRNA Length = 5073 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ttttctctcttctcatcatc 159 |||||||||||||||||||| Sbjct: 2264 ttttctctcttctcatcatc 2245
>ref|XM_717339.1| Candida albicans SC5314 hypothetical protein (CaO19_9102), mRNA Length = 5073 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ttttctctcttctcatcatc 159 |||||||||||||||||||| Sbjct: 2264 ttttctctcttctcatcatc 2245
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 367 cgccgggatcgccggtgagcgagc 390 |||||||||||| ||||||||||| Sbjct: 2920969 cgccgggatcgctggtgagcgagc 2920992
>gb|AC158652.5| Mus musculus 6 BAC RP23-238I17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217046 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 145150 tttctcttttctctcttctc 145131
>gb|AC166164.2| Mus musculus BAC clone RP23-394K2 from chromosome 17, complete sequence Length = 197143 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 caaaaggatgggtggaaatg 92 |||||||||||||||||||| Sbjct: 173881 caaaaggatgggtggaaatg 173900
>ref|XM_980438.1| PREDICTED: Mus musculus similar to immunoglobulin superfamily, member 2 (LOC436450), mRNA Length = 3076 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 2579 gggtggaaatggaggatgct 2598
>ref|XM_907687.2| PREDICTED: Mus musculus similar to immunoglobulin superfamily, member 2 (LOC633300), mRNA Length = 2350 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 1853 gggtggaaatggaggatgct 1872
>ref|XM_973806.1| PREDICTED: Mus musculus similar to immunoglobulin superfamily, member 2 (LOC630146), mRNA Length = 2737 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 2240 gggtggaaatggaggatgct 2259
>ref|XM_903217.2| PREDICTED: Mus musculus similar to immunoglobulin superfamily, member 2 (LOC630146), mRNA Length = 2737 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 2240 gggtggaaatggaggatgct 2259
>gb|AC140980.3| Mus musculus BAC clone RP24-255K12 from chromosome 18, complete sequence Length = 186798 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tacaggcaagacagacaaaa 77 |||||||||||||||||||| Sbjct: 29837 tacaggcaagacagacaaaa 29856
>gb|AC127256.4| Mus musculus BAC clone RP24-296G17 from chromosome 18, complete sequence Length = 178519 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gaagctgctgctgccctcac 352 |||||||||||||||||||| Sbjct: 85425 gaagctgctgctgccctcac 85406
>gb|AC125460.4| Mus musculus BAC clone RP24-448D10 from chromosome 15, complete sequence Length = 205859 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctcatca 157 |||||||| ||||||||||||||| Sbjct: 177651 tttctcttgtctctcttctcatca 177674
>emb|AL032631.1|CEY106G6H Caenorhabditis elegans YAC Y106G6H, complete sequence Length = 48613 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 132 tttttctcttttctctcttctcatcatc 159 |||||||||||||| || |||||||||| Sbjct: 16600 tttttctcttttctttcatctcatcatc 16573
>gb|AC122864.3| Mus musculus BAC clone RP23-142M19 from 6, complete sequence Length = 210148 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 157361 tttctcttttctctcttctc 157342
>gb|AC121894.2| Mus musculus BAC clone RP24-157H5 from 6, complete sequence Length = 148613 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 47364 ttttctcttttctctcttct 47383
>emb|CR718717.2|CNS0GHIB Tetraodon nigroviridis full-length cDNA Length = 1740 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aggatgcttatttggttcct 113 |||||||||||||||||||| Sbjct: 1427 aggatgcttatttggttcct 1408
>emb|CR717195.2|CNS0GGC4 Tetraodon nigroviridis full-length cDNA Length = 576 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 aggatgcttatttggttcct 113 |||||||||||||||||||| Sbjct: 257 aggatgcttatttggttcct 238
>gb|AC004920.2| Homo sapiens PAC clone RP5-898O18 from 7, complete sequence Length = 103421 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 tttcagaggctggaggtccaaaat 189 |||||||||||||| ||||||||| Sbjct: 83039 tttcagaggctggaagtccaaaat 83062
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ctgccttggtcacagatcgt 241 |||||||||||||||||||| Sbjct: 513484 ctgccttggtcacagatcgt 513465
>gb|AC100736.5| Mus musculus chromosome 15, clone RP24-336O6, complete sequence Length = 247275 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctcatca 157 |||||||| ||||||||||||||| Sbjct: 215189 tttctcttgtctctcttctcatca 215166
>gb|AF047651.1| Caenorhabditis elegans cosmid C05D2, complete sequence Length = 46437 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttc 151 |||||||||||||||||||| Sbjct: 27013 tttttctcttttctctcttc 27032
>gb|AC145394.1| Pan troglodytes BAC clone RP43-83L19 from 7, complete sequence Length = 144147 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 tttcagaggctggaggtccaaaat 189 |||||||||||||| ||||||||| Sbjct: 42992 tttcagaggctggaagtccaaaat 43015
>gb|AC164633.2| Mus musculus chromosome 15, clone RP24-374C19, complete sequence Length = 157653 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 32074 tttctcttttctctcttctc 32093
>gb|AC156828.8| Medicago truncatula clone mth2-18j19, complete sequence Length = 133901 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cttttctctcttctcatcat 158 |||||||||||||||||||| Sbjct: 104849 cttttctctcttctcatcat 104830 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 cttttctctcttctcatcat 158 |||||||||||||||||||| Sbjct: 99086 cttttctctcttctcatcat 99067
>gb|AC118590.11| Mus musculus chromosome 15, clone RP24-506N7, complete sequence Length = 155519 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 47057 tttctcttttctctcttctc 47038
>emb|Z99774.1|HS373H7 Human DNA sequence from clone CTA-373H7 on chromosome 22q11.22-12.2, complete sequence Length = 73239 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 atttttctcttttctctcttctca 154 ||||||||||| |||||||||||| Sbjct: 8727 atttttctcttctctctcttctca 8704
>emb|AL772392.4| Human DNA sequence from clone RP11-450P7 on chromosome X Contains the 3' end of the CNK2 gene for connector enhancer of KSR2 (KIAA0902), gene FLJ34960, 3' end of the SMPX gene for X-linked small muscle protein and a CpG island, complete sequence Length = 124186 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 agctgctgctgccctcactg 354 |||||||||||||||||||| Sbjct: 85752 agctgctgctgccctcactg 85771
>emb|AL451164.13| Human DNA sequence from clone RP11-298E9 on chromosome 10 Contains the 3' end of the PFKP gene for phosphofructokinase platelet, a novel gene (FLJ40226) the PITRM1 gene for pitrilysin metalloproteinase 1 (MP1 hMP1 KIAA1104), three novel genes and two CpG islands, complete sequence Length = 163070 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tggatttttctcttttctct 147 |||||||||||||||||||| Sbjct: 44661 tggatttttctcttttctct 44642
>emb|AL391475.7| Human DNA sequence from clone RP11-33G16 on chromosome 9 Contains a novel gene, complete sequence Length = 163058 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 acaggcaagacagacaaaag 78 |||||||||||||||||||| Sbjct: 28655 acaggcaagacagacaaaag 28674
>emb|AL391005.9| Human DNA sequence from clone RP11-288A5 on chromosome 10 Contains a forkhead box I1 (FOXI1) pseudogene and a CpG island, complete sequence Length = 163778 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tttcagaggctggaggtcca 185 |||||||||||||||||||| Sbjct: 124848 tttcagaggctggaggtcca 124867
>emb|AL358174.12| Human DNA sequence from clone RP11-387H19 on chromosome Xq27.1-28, complete sequence Length = 96743 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 24871 tttctcttttctctcttctc 24852
>emb|AL353607.20| Human DNA sequence from clone RP11-652B19 on chromosome 9 Contains part of the PCSK5 gene for proprotein convertase subtilisin/kexin type 5, complete sequence Length = 141170 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 100775 ttttctcttttctctcttct 100756
>gb|AF346500.2| Photorhabdus luminescens strain W14 toxin complex pathogenicity island 1, partial sequence Length = 127816 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 aaatggaggatgcttatttg 107 |||||||||||||||||||| Sbjct: 42958 aaatggaggatgcttatttg 42977
>gb|AC127357.5| Mus musculus BAC clone RP23-103P11 from chromosome 3, complete sequence Length = 220032 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 atttttctcttttctctcttctca 154 ||||||||||||| |||||||||| Sbjct: 119604 atttttctcttttatctcttctca 119581
>emb|AL713956.13| Mouse DNA sequence from clone RP23-412C18 on chromosome 11 Contains part of the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila), complete sequence Length = 138860 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 9351 tttctcttttctctcttctc 9370
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 gccatcctgctcgagccgcg 299 |||||||||||||||||||| Sbjct: 243734 gccatcctgctcgagccgcg 243753
>emb|AL669937.11| Mouse DNA sequence from clone DN-358O3 on chromosome 3 Contains the Trim45 gene for tripartite motif-containing 45, the Ttf2 gene for transcription termination factor RNA polymerase II, the ortholog of human immunoglobulin superfamily member 2 IGSF2 (Gm1016 genemodel 1016 (NCBI)) and the 3' end of the Ptgfrn gene for prostaglandin F2 receptor negative regulator, complete sequence Length = 163674 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 98563 gggtggaaatggaggatgct 98544
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttc 151 |||||||||||||||||||| Sbjct: 1547 tttttctcttttctctcttc 1566
>emb|AL606626.3|OSJN00050 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088K19, complete sequence Length = 156002 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttc 151 |||||||||||||||||||| Sbjct: 89094 tttttctcttttctctcttc 89113
>emb|BX936305.18| Zebrafish DNA sequence from clone CH211-51N3 in linkage group 13, complete sequence Length = 150383 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 129409 ttttctcttttctctcttct 129390
>emb|BX914217.19| Zebrafish DNA sequence from clone DKEY-175H14 in linkage group 18, complete sequence Length = 133981 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 15435 ttttctcttttctctcttct 15454
>gb|AE012160.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 68 of 460 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tcggccatcctgctcgagcc 296 |||||||||||||||||||| Sbjct: 4904 tcggccatcctgctcgagcc 4885
>gb|AF204145.1| Xanthomonas campestris pv. campestris LPS biosynthetic cluster, partial sequence; and putative electron-transferring flavoprotein beta subunit (etfS) and putative electron-transferring flavoprotein alpha subunit (etfL) genes, complete cds Length = 37753 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tcggccatcctgctcgagcc 296 |||||||||||||||||||| Sbjct: 4178 tcggccatcctgctcgagcc 4197
>gb|AC096642.2| Homo sapiens chromosome 1 clone RP11-392O17, complete sequence Length = 179048 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 13812 tttctcttttctctcttctc 13831
>gb|AC009287.17| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-668b24, complete sequence Length = 160785 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tacaggcaagacagacaaaa 77 |||||||||||||||||||| Sbjct: 5769 tacaggcaagacagacaaaa 5750
>gb|AC003061.1| Mouse Chromosome 6 BAC Clone b245c12, complete sequence Length = 162691 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 85698 tttctcttttctctcttctc 85717
>ref|XM_703002.1| PREDICTED: Danio rerio similar to oxysterol binding protein 1, transcript variant 2 (LOC564372), mRNA Length = 2290 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 gacagacaaaaggatgggtg 86 |||||||||||||||||||| Sbjct: 1044 gacagacaaaaggatgggtg 1025
>gb|AC159477.9| Mus musculus 10 BAC RP23-95I8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222553 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 ttgaagctgctgctgccctc 350 |||||||||||||||||||| Sbjct: 104148 ttgaagctgctgctgccctc 104167
>emb|CR392009.5| Mouse DNA sequence from clone RP24-250C1 on chromosome X, complete sequence Length = 106098 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttc 151 |||||||||||||||||||| Sbjct: 37217 tttttctcttttctctcttc 37236
>gb|AC068714.9| Homo sapiens chromosome 15 clone RP11-315O8 map 15q15, complete sequence Length = 200690 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 4253 tttctcttttctctcttctc 4272
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tcggccatcctgctcgagcc 296 |||||||||||||||||||| Sbjct: 4290652 tcggccatcctgctcgagcc 4290671
>ref|NM_060330.3| Caenorhabditis elegans Y106G6H.6 (Y106G6H.6) mRNA, complete cds Length = 1473 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 tttttctcttttctctcttctcatcatc 159 |||||||||||||| || |||||||||| Sbjct: 1402 tttttctcttttctttcatctcatcatc 1429
>gb|AC073897.6|AC073897 Homo sapiens chromosome 15 clone RP11-718O11 map 15q21.1, complete sequence Length = 180538 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 178396 tttctcttttctctcttctc 178415
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 19021751 tttctcttttctctcttctc 19021770
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 11284836 ttttctcttttctctcttct 11284855
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctcatc 156 |||||||| ||||||||||||||| Sbjct: 28497922 ttttctctcttctctcttctcatc 28497945 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 17739593 tttctcttttctctcttctc 17739574
>dbj|AB158609.1| Mus musculus CD101 gene for EWI immunoglobulin subfamily member EWI-101, complete cds, strain:NON/Shi Length = 5134 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 4479 gggtggaaatggaggatgct 4498
>dbj|AB158591.1| Mus musculus CD101 gene for EWI immunoglobulin subfamily member EWI-101, complete cds, strain:NSY/Shi Length = 5135 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 4480 gggtggaaatggaggatgct 4499
>dbj|AB158600.1| Mus musculus CD101 gene for EWI immunoglobulin subfamily member EWI-101, complete cds, strain:IIS/Shi Length = 5134 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 4479 gggtggaaatggaggatgct 4498
>dbj|AB158582.1| Mus musculus CD101 gene for EWI immunoglobulin subfamily member EWI-101, complete cds, strain:NOD/Shi Length = 5135 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 4480 gggtggaaatggaggatgct 4499
>gb|AC123764.18| Homo sapiens chromosome 17, clone CTC-784N20, complete sequence Length = 144000 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 ctgctgctgccctcactgaggttg 360 |||||||||||||| ||||||||| Sbjct: 79269 ctgctgctgccctccctgaggttg 79292
>gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y, complete sequence Length = 178377 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ttcagaggctggaggtccaa 186 |||||||||||||||||||| Sbjct: 12159 ttcagaggctggaggtccaa 12178
>ref|XM_227554.3| PREDICTED: Rattus norvegicus immunoglobulin superfamily, member 2 (predicted) (Igsf2_predicted), mRNA Length = 4014 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 3053 gggtggaaatggaggatgct 3072
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttctcatc 156 |||||||| ||||||||||||||| Sbjct: 24361 ttttctctcttctctcttctcatc 24384
>dbj|AP003217.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0094H06 Length = 147245 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 121128 tttctcttttctctcttctc 121109
>dbj|AP006166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1435D02 Length = 131152 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 100135 ttttctcttttctctcttct 100154
>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0042E12 Length = 164688 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 159658 ttttctcttttctctcttct 159677
>gb|AC158195.2| Physcomitrella patens clone JGIASYB-1A10, complete sequence Length = 42996 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 ttccatggatttttctcttt 142 |||||||||||||||||||| Sbjct: 3776 ttccatggatttttctcttt 3757
>gb|J04028.1|CHKCPG Gallus gallus proteoglycan core protein gene, partial cds Length = 5942 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 1551 ttttctcttttctctcttct 1570
>gb|AC153873.5| Mus musculus 10 BAC RP23-87M12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207864 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 28075 ttttctcttttctctcttct 28094
>gb|AC009181.5|AC009181 Homo sapiens clone RP11-224A1 from 7q31, complete sequence Length = 159027 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 tttcagaggctggaggtccaaaat 189 |||||||||||||| ||||||||| Sbjct: 81754 tttcagaggctggaagtccaaaat 81777
>gb|AC144461.33| Mus musculus strain C57BL/6J clone rp23-427m23, complete sequence Length = 164848 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tacaggcaagacagacaaaa 77 |||||||||||||||||||| Sbjct: 102137 tacaggcaagacagacaaaa 102118
>emb|BX004824.9| Zebrafish DNA sequence from clone CH211-57I17 in linkage group 20, complete sequence Length = 148801 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 gttttcagaggctggaggtc 183 |||||||||||||||||||| Sbjct: 20698 gttttcagaggctggaggtc 20717
>gb|AC155334.7| Mus musculus 6 BAC RP24-420O24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 153509 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 151682 ttttctcttttctctcttct 151701
>emb|CT806423.2| Pan troglodytes chromosome X clone CH251-25B01 map Xq28, complete sequence Length = 220032 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 23936 tttctcttttctctcttctc 23917
>emb|Z81550.1|CEF55F3 Caenorhabditis elegans Cosmid F55F3, complete sequence Length = 42521 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 ttttctcttttctctcttct 152 |||||||||||||||||||| Sbjct: 33428 ttttctcttttctctcttct 33409
>gb|AF084363.1|AF084363 Mus musculus D6MM5e protein (D6Mm5e) and DOK protein (Dok) genes, complete cds; and LOR2 protein (Lor2) gene, partial cds Length = 108752 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 23115 tttctcttttctctcttctc 23096
>gb|AC116115.11| Mus musculus chromosome 6, clone RP23-60P18, complete sequence Length = 215571 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 8014 tttctcttttctctcttctc 7995
>emb|BX004781.7| Zebrafish DNA sequence from clone CH211-149G8 in linkage group 1, complete sequence Length = 169991 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gacagacaaaaggatgggtg 86 |||||||||||||||||||| Sbjct: 27801 gacagacaaaaggatgggtg 27820
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 18947978 tttctcttttctctcttctc 18947997
>emb|AL645987.7| Mouse DNA sequence from clone RP23-27B20 on chromosome 11 Contains a eukaryotic translation initiation factor 3, subunit 2 (beta) (Eif3s2) pseudogene, a novel protein (MOR256-1) similar to the olfactory receptor family and a novel protein (MOR256-28) similar to the olfactory receptor family, complete sequence Length = 99868 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 11837 tttctcttttctctcttctc 11856
>emb|AL731746.5|CNS08C7V Oryza sativa chromosome 12, . BAC OSJNBa0039K19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104289 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 25282 tttctcttttctctcttctc 25301
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 117843 tttctcttttctctcttctc 117862
>gb|AC134899.4| Mus musculus BAC clone RP24-81B7 from 6, complete sequence Length = 197316 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 135419 tttctcttttctctcttctc 135438
>gb|AC131658.3| Mus musculus BAC clone RP23-239F24 from 3, complete sequence Length = 200955 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 atttttctcttttctctcttctca 154 ||||||||||||| |||||||||| Sbjct: 2118 atttttctcttttatctcttctca 2095
>emb|AL669872.8| Mouse DNA sequence from clone RP23-357D5 on chromosome 3, complete sequence Length = 199673 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 gggtggaaatggaggatgct 101 |||||||||||||||||||| Sbjct: 153090 gggtggaaatggaggatgct 153071
>gb|K00824.1|CHKHBBR2 chicken embryonic epsilon (beta-like) globin gene Length = 1955 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 acccatctgtgtgctctgccttgg 230 |||||| ||||||||||||||||| Sbjct: 1902 acccatgtgtgtgctctgccttgg 1925
>emb|AL732425.7| Mouse DNA sequence from clone RP23-364L1 on chromosome X, complete sequence Length = 145042 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tttctcttttctctcttctc 153 |||||||||||||||||||| Sbjct: 79966 tttctcttttctctcttctc 79985 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,882,305 Number of Sequences: 3902068 Number of extensions: 4882305 Number of successful extensions: 127503 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126502 Number of HSP's gapped (non-prelim): 1001 length of query: 401 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 379 effective length of database: 17,147,199,772 effective search space: 6498788713588 effective search space used: 6498788713588 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
