>XTH29_ARATH (Q8L7H3) Probable xyloglucan endotransglucosylase/hydrolase protein|
           29 precursor (EC 2.4.1.207) (At-XTH29) (XTH-29)
          Length = 357

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 17/44 (38%), Positives = 29/44 (65%)
 Frame = -1

Query: 374 LLTHDVAVMAPAKRAAMRGFREQHLTYTACRDRVRYKTTVFPEC 243
           L+++D + ++P +  AMR FRE+++ Y+ C D +RY     PEC
Sbjct: 270 LMSNDYSTISPKQATAMRRFRERYMYYSYCYDTIRYSVPP-PEC 312

>XTH28_ARATH (Q38909) Probable xyloglucan endotransglucosylase/hydrolase protein|
           28 precursor (EC 2.4.1.207) (At-XTH28) (XTH-28)
          Length = 332

 Score = 33.9 bits (76), Expect = 0.098
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -1

Query: 341 AKRAAMRGFREQHLTYTACRDRVRYKTTVFPEC 243
           ++R  M  FR++H+TY+ C D +RYK  V  EC
Sbjct: 259 SQRNKMEIFRQKHMTYSYCYDHMRYK-VVLSEC 290

>XTH30_ARATH (Q38908) Probable xyloglucan endotransglucosylase/hydrolase protein|
           30 precursor (EC 2.4.1.207) (At-XTH30) (XTH-30)
          Length = 343

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -1

Query: 374 LLTHDVAVMAPAKRAAMRGFREQHLTYTACRDRVRYKTTVFPEC 243
           L + D + +   +RAAMR FR++ + Y+ C D +RY   + PEC
Sbjct: 251 LESQDYSSINSHQRAAMRRFRQRFMYYSYCYDTLRYPEPL-PEC 293

>XTH27_ARATH (Q8LDS2) Probable xyloglucan endotransglucosylase/hydrolase protein|
           27 precursor (EC 2.4.1.207) (At-XTH27) (XTH-27)
          Length = 333

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 350 MAPAKRAAMRGFREQHLTYTACRDRVRYKTTVFPEC 243
           + P++R+ M  FR + +TY+ C DR RY   +  EC
Sbjct: 256 ITPSQRSKMDVFRRRLMTYSYCYDRARYNVAL-SEC 290

>ATM_NEUCR (Q7RZT9) Serine/threonine-protein kinase tel-1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase tel-1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2953

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 94  AMHRSTRLIRSETITYCML-EEYCSGEDDRRRLFLDSPQRWKLESPSARSSHSGKTVVL 267
           A  R+ +  R   + Y +L E+    ED  +    D P+R ++ +  + SSHS K ++L
Sbjct: 671 AQFRAVQKQRHAMLRYLLLLEDEAPPEDSHKATSTDQPKREEIRAADSSSSHSAKRLIL 729

>TLK1_MOUSE (Q8C0V0) Serine/threonine-protein kinase tousled-like 1 (EC|
           2.7.11.1) (Tousled-like kinase 1)
          Length = 766

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 25  SCVLYWVHFR*MNEPRSTKLLDHAMHRSTRLIRSETITYCMLEEYCSGED 174
           +C  Y +H + ++ PR  KL D+           +T T+C + EYC G D
Sbjct: 505 ACREYRIH-KELDHPRIVKLYDY--------FSLDTDTFCTVLEYCEGND 545

>TLK1_HUMAN (Q9UKI8) Serine/threonine-protein kinase tousled-like 1 (EC|
           2.7.11.1) (Tousled-like kinase 1) (PKU-beta)
          Length = 766

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 25  SCVLYWVHFR*MNEPRSTKLLDHAMHRSTRLIRSETITYCMLEEYCSGED 174
           +C  Y +H + ++ PR  KL D+           +T T+C + EYC G D
Sbjct: 505 ACREYRIH-KELDHPRIVKLYDY--------FSLDTDTFCTVLEYCEGND 545

>KCNA4_RAT (P15385) Potassium voltage-gated channel subfamily A member 4|
           (Voltage-gated potassium channel subunit Kv1.4) (RCK4)
           (RHK1) (RK3)
          Length = 655

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 323 RGFREQHLTYTACRDRVRYKTTVFPECDDLADGDS 219
           RG RE+  T T  + ++ ++ + FP C DL    S
Sbjct: 80  RGSREEEATRTEKKKKLHHRQSSFPHCSDLMPSGS 114

>BEDC2_PSEPU (Q07945) Benzene 1,2-dioxygenase beta subunit (EC 1.14.12.3)|
          Length = 187

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 103 RSTRLIRSETITYCMLEEYCSGEDDR-----RRLFLDSPQRWKLESPSARSSHSGKTVVL 267
           R+TR++R   + Y  L +Y   +DD      R   + S   W  E+P++R+ H    V++
Sbjct: 60  RTTRIMRDSRLEYSGLRDYAHFDDDATMMKGRLRKITSDVSWS-ENPASRTRHIVSNVMI 118

Query: 268 YRT 276
             T
Sbjct: 119 IPT 121

>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein|
           19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19)
          Length = 277

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -1

Query: 326 MRGFREQHLTYTACRDRVRYKTTVFPEC 243
           M+G + +++ Y  C D+ R+   V PEC
Sbjct: 249 MKGVQSKYMVYNYCSDKKRFPRGVPPEC 276

>YIJF_ECOLI (P32668) Hypothetical protein yijF precursor|
          Length = 205

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +1

Query: 172 DDRRRLFLDSPQRWKLESPSARSSHSGKTVVLYRTLSRHAV*VRCCSRNP 321
           +D  + F + PQ+WKL+ P +   H  +   L    SRH    R  S+NP
Sbjct: 95  EDMAKNFAEYPQKWKLKRPDSNIDHR-RVPNLETWFSRHDK-TRPTSKNP 142

>MIP1_SCHPO (P87141) WD-repeat protein mip1|
          Length = 1313

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +2

Query: 2   PNKKNLNPPVYCTGYISDR*TNLGRQNYLTMPCIDRL 112
           PNK NLN  +   G + DR T LG  N++     D +
Sbjct: 340 PNKLNLNMLLKIPGRLQDRRTPLGELNWIFTAITDTI 376

>TLK2_MOUSE (O55047) Serine/threonine-protein kinase tousled-like 2 (EC|
           2.7.11.1) (Tousled-like kinase 2)
          Length = 718

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 25  SCVLYWVHFR*MNEPRSTKLLDHAMHRSTRLIRSETITYCMLEEYCSGED 174
           +C  Y +H + ++ PR  KL D+           +T ++C + EYC G D
Sbjct: 457 ACREYRIH-KELDHPRIVKLYDY--------FSLDTDSFCTVLEYCEGND 497

>TLK2_HUMAN (Q86UE8) Serine/threonine-protein kinase tousled-like 2 (EC|
           2.7.11.1) (Tousled-like kinase 2) (PKU-alpha)
          Length = 772

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +1

Query: 25  SCVLYWVHFR*MNEPRSTKLLDHAMHRSTRLIRSETITYCMLEEYCSGED 174
           +C  Y +H + ++ PR  KL D+           +T ++C + EYC G D
Sbjct: 511 ACREYRIH-KELDHPRIVKLYDY--------FSLDTDSFCTVLEYCEGND 551


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,336,761
Number of Sequences: 219361
Number of extensions: 885153
Number of successful extensions: 2339
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2339
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)