>APX8_ORYSA (Q69SV0) Probable L-ascorbate peroxidase 8, chloroplast precursor|
           (EC 1.11.1.11)
          Length = 478

 Score = 84.7 bits (208), Expect = 5e-17
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = -1

Query: 331 SDXMKQKIRAEYEGLGGSPDKPMQSNYFLNIMIVIAGLAFLTSLVGN 191
           SD MKQKIRAEYEG GGSPDKP+QSNYFLNIM++I GLAFLTSL+G+
Sbjct: 432 SDSMKQKIRAEYEGFGGSPDKPLQSNYFLNIMLLIGGLAFLTSLLGS 478

>PARN_BRARE (Q7ZU92) Poly(A)-specific ribonuclease PARN (EC 3.1.13.4)|
           (Polyadenylate-specific ribonuclease)
          Length = 660

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
 Frame = +2

Query: 146 LHQMKKKRLIRPPILVADQRRQECQSCDHDHNVE--EVVGLHRLIRAASKA--LVLGSDL 313
           L   KK+R I+   +  ++RR+  Q        E  + VG  R+IRA SK+  LV+G ++
Sbjct: 228 LETEKKERFIQISKVDDEERRRREQQKQQREQEELNDAVGFSRVIRAISKSGKLVVGHNM 287

Query: 314 LL 319
           LL
Sbjct: 288 LL 289

>TRMU_RICTY (Q68X66) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 358

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 22  SNLLGLPHFTSNDENSRQGKMTKSIALVILHVDTPVP 132
           +N LG+PH+  + EN  +  +  +     LH +TP+P
Sbjct: 61  ANKLGIPHYVLDYENKFKESVIDNFVNSYLHGETPLP 97

>SOX5_MOUSE (P35710) Transcription factor SOX-5|
          Length = 763

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 28/104 (26%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
 Frame = +1

Query: 28  LLGLPHFTSNDENSRQGKMTKSIALVILHVDTPVPGKWLITPDEKEETHQTTDLSCRPET 207
           LLGLP          QG +  +++   +H D          P  K+E  Q  +LS +P+T
Sbjct: 357 LLGLP----------QGNLGAAVSPTSIHTDKSTNSP---PPKSKDEVAQPLNLSAKPKT 403

Query: 208 S-----------RMPILRSRS*C*GSSWTA*AYPGCLQGPRTRL 306
           S            MP LR  S   G+     + P  L  P  R+
Sbjct: 404 SDGKSPASPTSPHMPALRINS---GAGPLKASVPAALASPSARV 444

>TRMU_RICPR (Q9ZDM1) Probable tRNA|
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase
           (EC 2.1.1.61)
          Length = 358

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +1

Query: 22  SNLLGLPHFTSNDENSRQGKMTKSIALVILHVDTPVP 132
           +N LG+PH+  + EN  +  +  +     LH +TP+P
Sbjct: 61  ANKLGIPHYVLDYENKFKESVIDNFVDSYLHGETPLP 97

>ZN493_HUMAN (Q6ZR52) Zinc finger protein 493|
          Length = 646

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 15/98 (15%)
 Frame = +2

Query: 41  LTLLQMMKTQDKV----R*PKALPWSSCMSTHQSLENG*LHQMKKKR-----------LI 175
           LT+ +M+ T +K        KA   SS ++TH+ +  G  H+  K +           L 
Sbjct: 404 LTIHKMIHTGEKPYKCEECGKAFNRSSHLTTHKRIHTG--HKPYKCKECGKSFSVFSTLT 461

Query: 176 RPPILVADQRRQECQSCDHDHNVEEVVGLHRLIRAASK 289
           +  I+  D++  +C+ C    N   ++ +H+ I    K
Sbjct: 462 KHKIIHTDKKPYKCEECGKAFNRSSILSIHKKIHTGEK 499

>OX2G_MOUSE (O54901) OX-2 membrane glycoprotein precursor (MRC OX-2 antigen)|
           (CD200 antigen)
          Length = 278

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 142 LITPDEKEETHQTTDLSCRPETSRMPIL 225
           ++T DE++  H T  L C  +TS+ P++
Sbjct: 34  VVTQDERKALHTTASLRCSLKTSQEPLI 61

>PVG1_SCHPO (Q9UT27) Pyruvyltransferase 1 precursor (EC 2.-.-.-) (Pyruvylated|
           Gal-beta-1,3-epitope synthesis protein 1) (PvGal
           synthesis protein 1)
          Length = 401

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 1   RKHPMVSSNLLGLPHFTSNDENSRQGKMT 87
           R H  + S L+G+PH     ENS+ GK+T
Sbjct: 337 RLHAHILSTLMGIPHIVV--ENSQMGKIT 363

>UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfur subunit 1,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 1) (RISP1) (Fragment)
          Length = 258

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  SSNLLGLPHFTSNDENSRQGKMTKSIALVILH 114
           SS  +   HF+S+D++S    ++ S+A V LH
Sbjct: 10  SSAFISANHFSSDDDSSSPRSISPSLASVFLH 41

>ATF2_MOUSE (P16951) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1) (MXBP protein)
          Length = 487

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = +1

Query: 73  QGKMTKSIALVILHVDTPVPGKWLITPDEKE----ETHQTTDLSCRPETSRMP 219
           + K+ +   +   H D+P+P     T DEKE    +T Q T    RP + ++P
Sbjct: 102 RSKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVP 154

>ATF2_HUMAN (P15336) Cyclic AMP-dependent transcription factor ATF-2|
           (Activating transcription factor 2) (cAMP response
           element-binding protein CRE-BP1) (HB16)
          Length = 487

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
 Frame = +1

Query: 73  QGKMTKSIALVILHVDTPVPGKWLITPDEKE----ETHQTTDLSCRPETSRMP 219
           + K+ +   +   H D+P+P     T DEKE    +T Q T    RP + ++P
Sbjct: 102 RSKIEEPSVVETTHQDSPLPHPESTTSDEKEVPLAQTAQPTSAIVRPASLQVP 154

>SLAF9_MOUSE (Q9D780) SLAM family member 9 precursor|
          Length = 285

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +1

Query: 31  LGLPHFTSNDENSRQGKMTKSIALVILHVDTPVPGKWLITPDEKEETHQTTDLS 192
           L  PH T N   S +G    S+   I      V   WL + D    +H+ + LS
Sbjct: 131 LSKPHITVNSNISEEGVCNISLTCSIERAGMDVTYIWLSSQDSTNTSHEGSVLS 184

>UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 2) (RISP2)
          Length = 272

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  SSNLLGLPHFTSNDENSRQGKMTKSIALVILH 114
           SS  +   HF+S+D++S    ++ S+A V LH
Sbjct: 24  SSAFISANHFSSDDDSSSPRSISPSLASVFLH 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,773,349
Number of Sequences: 219361
Number of extensions: 865414
Number of successful extensions: 1986
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1986
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)