| Clone Name | rbaet115g08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AMY1_SACFI (P21567) Alpha-amylase precursor (EC 3.2.1.1) | 27 | 9.6 |
|---|
>AMY1_SACFI (P21567) Alpha-amylase precursor (EC 3.2.1.1)| Length = 494 Score = 27.3 bits (59), Expect = 9.6 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +3 Query: 3 TTYNYTFHSHWIYKSYKISNGMMT 74 T Y Y +H +W+ YKI+ T Sbjct: 100 TAYGYAYHGYWMKNIYKINENFGT 123 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,849,572 Number of Sequences: 219361 Number of extensions: 638614 Number of successful extensions: 1709 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1606 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1706 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)