ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet115d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MPG1_YEAST (P41940) Mannose-1-phosphate guanyltransferase (EC 2.... 83 4e-16
2MPG1_CANAL (O93827) Mannose-1-phosphate guanyltransferase (EC 2.... 81 1e-15
3MPG1_SCHPO (O74484) Probable mannose-1-phosphate guanyltransfera... 79 6e-15
4MPG1_SULAC (P37820) Putative mannose-1-phosphate guanyltransfera... 38 0.016
5LRFN2_MACFA (Q9BE71) Leucine-rich repeat and fibronectin type-II... 32 0.88
6LRFN2_HUMAN (Q9ULH4) Leucine-rich repeat and fibronectin type-II... 32 0.88
7TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 31 1.5
8TILS_TROWT (Q83MT2) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 31 1.5
9GLMU_DEIRA (Q9RW61) Bifunctional protein glmU [Includes: UDP-N-a... 31 1.5
10LRFN2_MOUSE (Q80TG9) Leucine-rich repeat and fibronectin type-II... 31 2.0
11PRP4_BOVIN (P18917) Placental prolactin-related protein 4 precur... 31 2.0
12GLMU_METCA (Q60CR2) Bifunctional protein glmU [Includes: UDP-N-a... 30 3.3
13SERC2_HUMAN (Q96SA4) Serine incorporator 2 (Tumor differentially... 30 3.3
14PRL_PIG (P01238) Prolactin precursor (PRL) 30 4.4
15CCR9_HUMAN (P51686) C-C chemokine receptor type 9 (C-C CKR-9) (C... 29 5.7
16PRL_HORSE (P12420) Prolactin precursor (PRL) 29 5.7
17DAPD_WIGBR (Q8D2G0) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate... 29 7.5
18SCPB_MYCGA (Q7NB77) Segregation and condensation protein B 29 7.5
19OPT3_ARATH (O23482) Probable oligopeptide transporter 3 (AtOPT3) 29 7.5
20GLMU_RALEJ (Q476S2) Bifunctional protein glmU [Includes: UDP-N-a... 29 7.5
21NEB2_HUMAN (Q96SB3) Neurabin-2 (Neurabin-II) (Spinophilin) (Prot... 28 9.7
22GLMU_PSEU2 (Q4ZL26) Bifunctional protein glmU [Includes: UDP-N-a... 28 9.7
23GLMU_PSE14 (Q48BG7) Bifunctional protein glmU [Includes: UDP-N-a... 28 9.7

>MPG1_YEAST (P41940) Mannose-1-phosphate guanyltransferase (EC 2.7.7.13)|
           (ATP-mannose-1-phosphate guanylyltransferase)
           (GDP-mannose pyrophosphorylase) (NDP-hexose
           pyrophosphorylase)
          Length = 361

 Score = 82.8 bits (203), Expect = 4e-16
 Identities = 34/64 (53%), Positives = 48/64 (75%)
 Frame = -2

Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 303
           +K H+ +  +IVGW+STVG+W R+E +T+LG+DV V DE+Y NGG VLPHK I  ++ K 
Sbjct: 298 IKNHSLVKSTIVGWNSTVGQWCRLEGVTVLGDDVEVKDEIYINGGKVLPHKSISDNVPKE 357

Query: 302 EIVM 291
            I+M
Sbjct: 358 AIIM 361



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>MPG1_CANAL (O93827) Mannose-1-phosphate guanyltransferase (EC 2.7.7.13)|
           (ATP-mannose-1-phosphate guanylyltransferase)
           (GDP-mannose pyrophosphorylase) (CASRB1)
          Length = 362

 Score = 81.3 bits (199), Expect = 1e-15
 Identities = 35/64 (54%), Positives = 47/64 (73%)
 Frame = -2

Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 303
           VK HA +  +IVGW+S +GKWAR E +T+LG+DV V +E+Y NG  VLPHK I S++ K 
Sbjct: 299 VKDHAWVKSTIVGWNSRIGKWARTEGVTVLGDDVEVKNEIYVNGAKVLPHKSISSNVEKE 358

Query: 302 EIVM 291
            I+M
Sbjct: 359 SIIM 362



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>MPG1_SCHPO (O74484) Probable mannose-1-phosphate guanyltransferase (EC|
           2.7.7.13) (GTP-mannose-1-phosphate guanylyltransferase)
           (GDP-mannose pyrophosphorylase)
          Length = 363

 Score = 79.0 bits (193), Expect = 6e-15
 Identities = 33/64 (51%), Positives = 49/64 (76%)
 Frame = -2

Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 303
           V+ HA +  SIVGW+ST+G W+R+EN+++LG+DV V DE+Y NGG +LPHK I ++I  P
Sbjct: 299 VRDHAWVKSSIVGWNSTLGSWSRLENVSVLGDDVVVNDEIYVNGGSILPHKSISANIEVP 358

Query: 302 EIVM 291
             ++
Sbjct: 359 GTIV 362



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>MPG1_SULAC (P37820) Putative mannose-1-phosphate guanyltransferase (EC|
           2.7.7.13) (ATP-mannose-1-phosphate guanylyltransferase)
           (GDP-mannose pyrophosphorylase) (NDP-hexose
           pyrophosphorylase)
          Length = 359

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = -2

Query: 464 ISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSN-GGVVLPHKEIKSSI 312
           I  S++G   ++GKW RV+   I+G+ V + D+V+ N   ++LP KE+  S+
Sbjct: 301 IKESVIGDEVSLGKWNRVDG-AIIGDGVLIHDQVFINRDTIILPDKEVAESV 351



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>LRFN2_MACFA (Q9BE71) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 2 precursor
          Length = 789

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 207 KQRTHEEIYDRFSPCGAGAGTAARSPHS 290
           K +  EE+ D  +P G GAGT+AR  HS
Sbjct: 666 KSQRKEELLDSRTPAGRGAGTSARGHHS 693



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>LRFN2_HUMAN (Q9ULH4) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 2 precursor
          Length = 789

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 207 KQRTHEEIYDRFSPCGAGAGTAARSPHS 290
           K +  EE+ D  +P G GAGT+AR  HS
Sbjct: 666 KSQRKEELLDSRTPAGRGAGTSARGHHS 693



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>TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 407

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 292 CECGDRAAVPAPAPHGEKRSYI--SSCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVS 119
           C C  R   P P P  E RSY    SC +C+   A  F      S   VFIR +  LD++
Sbjct: 190 CSCDSRPYPPPPEPRNENRSYFPHPSC-KCVEGSATRFTNADIDSRFGVFIRPF--LDIT 246

Query: 118 Q 116
           +
Sbjct: 247 R 247



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>TILS_TROWT (Q83MT2) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 415

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
 Frame = -3

Query: 292 CECGDRAAVPAPAPHGEKRSYI--SSCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVS 119
           C C  R   P P P  E RSY    SC +C+   A  F      S   VFIR +  LD++
Sbjct: 198 CSCDSRPYPPPPEPRNENRSYFPHPSC-KCVEGSATRFTNADIDSRFGVFIRPF--LDIT 254

Query: 118 Q 116
           +
Sbjct: 255 R 255



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>GLMU_DEIRA (Q9RW61) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 484

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = -2

Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375
           +K H+ +  + VG  S VG +AR+   ++LGE VH+
Sbjct: 314 IKAHSVLEQAEVGAGSDVGPFARLRPGSVLGEGVHI 349



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>LRFN2_MOUSE (Q80TG9) Leucine-rich repeat and fibronectin type-III|
           domain-containing protein 2 precursor
          Length = 788

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 207 KQRTHEEIYDRFSPCGAGAGTAARSPHS 290
           K +  EE+ D  +P G GAGT++R  HS
Sbjct: 667 KSQRKEELLDSRTPAGRGAGTSSRGHHS 694



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>PRP4_BOVIN (P18917) Placental prolactin-related protein 4 precursor (PLP-III)|
          Length = 239

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = -3

Query: 265 PAPAPHGEKRSY---ISSCVRCLLLVAELFVCKS--CPSNC 158
           PAP+ HG + +Y     SC+  LL+++ L +C+   CPS C
Sbjct: 3   PAPSFHGHQWTYNLVRGSCLLLLLVMSNLLLCQGILCPSLC 43



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>GLMU_METCA (Q60CR2) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 461

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = -2

Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375
           V  ++ I G+++G  S VG +AR+   ++L E VH+
Sbjct: 308 VLANSVIEGAVIGAGSRVGPFARLRPESVLAEGVHI 343



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>SERC2_HUMAN (Q96SA4) Serine incorporator 2 (Tumor differentially expressed|
           2-like)
          Length = 456

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -3

Query: 223 SCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVSQVFSFFIFGRQNVSRLNLSPG 56
           SC  CL   A   +C  CP++    +          +F+FF+F    VS + LSPG
Sbjct: 12  SCASCLCGSAPCILCSCCPASRNSTVS-------RLIFTFFLFLGVLVSIIMLSPG 60



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>PRL_PIG (P01238) Prolactin precursor (PRL)|
          Length = 229

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 9/36 (25%)
 Frame = -3

Query: 223 SCVRCLLLVAELFVCKS------CPS---NCQVFIR 143
           S +  LLLV+ LF+CKS      CPS   NCQV +R
Sbjct: 11  SLLLLLLLVSNLFLCKSVASLPICPSGAVNCQVSLR 46



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>CCR9_HUMAN (P51686) C-C chemokine receptor type 9 (C-C CKR-9) (CC-CKR-9)|
           (CCR-9) (GPR-9-6) (G-protein coupled receptor 28)
           (CDw199 antigen)
          Length = 357

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 211 CLLLVAELFVCKSCPSNCQVFIRLYVCLDVSQVFSFF 101
           C+LLV  +       SNC V   + +C  V+Q  +FF
Sbjct: 260 CILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIAFF 296



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>PRL_HORSE (P12420) Prolactin precursor (PRL)|
          Length = 229

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 10/44 (22%)
 Frame = -3

Query: 244 EKRSYIS-SCVRCLLLVAELFVCKS------CPS---NCQVFIR 143
           +KRS +  S +  LLLV++L +CKS      CPS   NCQV +R
Sbjct: 3   KKRSSLKGSLLLLLLLVSDLLLCKSVASLPICPSGAVNCQVSLR 46



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>DAPD_WIGBR (Q8D2G0) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate|
           N-succinyltransferase (EC 2.3.1.117)
           (Tetrahydrodipicolinate N-succinyltransferase) (THP
           succinyltransferase) (Tetrahydropicolinate succinylase)
          Length = 274

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = -2

Query: 458 GSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLP 336
           G+ +G +ST+  W+ + +   +G++VH+   V   GGV+ P
Sbjct: 131 GAYIGENSTIDTWSTIGSCAQIGKNVHISGGV-GIGGVLEP 170



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>SCPB_MYCGA (Q7NB77) Segregation and condensation protein B|
          Length = 291

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -2

Query: 215 SLFIIGRRAVCLQELSIQLPSVHQALCMFRRVASFFFLY 99
           +L++ GR  + LQEL+  LP +HQ   +F+ +    + Y
Sbjct: 111 ALYVAGRNGMTLQELNKILPKIHQDQ-LFKELEEMIYSY 148



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>OPT3_ARATH (O23482) Probable oligopeptide transporter 3 (AtOPT3)|
          Length = 737

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +3

Query: 27  IHLTPIYKLKPGLKFNRDTFCLPKIKKEKTCDTSKHT*SLMNTWQLD--GQLLQT 185
           ++L+P++ L  G  F R T  L  +      D  K T S +NT +LD  G+L+Q+
Sbjct: 357 LYLSPLFALSIGSGFARFTATLTHVALFNGRDIWKQTWSAVNTTKLDIHGKLMQS 411



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>GLMU_RALEJ (Q476S2) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 454

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -2

Query: 464 ISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKE 327
           I  + +G    +G +AR+   T LGEDVH+ + V      V  H +
Sbjct: 311 IDSAKIGADGRIGPYARLRPGTELGEDVHIGNFVEVKNSQVAAHSK 356



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>NEB2_HUMAN (Q96SB3) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein|
           phosphatase 1 regulatory subunit 9B)
          Length = 815

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 225 EIYDRFSPCGAGAGTAARSPHSHDNLGLEDAGLDLLVR 338
           ++++R +P   G   AAR     +  GL+D  LD++VR
Sbjct: 149 KLFERSAPAAGGDKEAARRLLRQERAGLQDRKLDVVVR 186



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>GLMU_PSEU2 (Q4ZL26) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 455

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375
           VK ++ I G+I+G  S  G +AR+   ++LG   HV
Sbjct: 306 VKANSHIEGAILGEGSDAGPFARLRPGSVLGAKAHV 341



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>GLMU_PSE14 (Q48BG7) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 455

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -2

Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375
           VK ++ I G+I+G  S  G +AR+   ++LG   HV
Sbjct: 306 VKANSHIEGAILGEGSDAGPFARLRPGSVLGAKAHV 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,287,333
Number of Sequences: 219361
Number of extensions: 1358545
Number of successful extensions: 4143
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4135
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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