| Clone Name | rbaet115d11 |
|---|---|
| Clone Library Name | barley_pub |
>MPG1_YEAST (P41940) Mannose-1-phosphate guanyltransferase (EC 2.7.7.13)| (ATP-mannose-1-phosphate guanylyltransferase) (GDP-mannose pyrophosphorylase) (NDP-hexose pyrophosphorylase) Length = 361 Score = 82.8 bits (203), Expect = 4e-16 Identities = 34/64 (53%), Positives = 48/64 (75%) Frame = -2 Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 303 +K H+ + +IVGW+STVG+W R+E +T+LG+DV V DE+Y NGG VLPHK I ++ K Sbjct: 298 IKNHSLVKSTIVGWNSTVGQWCRLEGVTVLGDDVEVKDEIYINGGKVLPHKSISDNVPKE 357 Query: 302 EIVM 291 I+M Sbjct: 358 AIIM 361
>MPG1_CANAL (O93827) Mannose-1-phosphate guanyltransferase (EC 2.7.7.13)| (ATP-mannose-1-phosphate guanylyltransferase) (GDP-mannose pyrophosphorylase) (CASRB1) Length = 362 Score = 81.3 bits (199), Expect = 1e-15 Identities = 35/64 (54%), Positives = 47/64 (73%) Frame = -2 Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 303 VK HA + +IVGW+S +GKWAR E +T+LG+DV V +E+Y NG VLPHK I S++ K Sbjct: 299 VKDHAWVKSTIVGWNSRIGKWARTEGVTVLGDDVEVKNEIYVNGAKVLPHKSISSNVEKE 358 Query: 302 EIVM 291 I+M Sbjct: 359 SIIM 362
>MPG1_SCHPO (O74484) Probable mannose-1-phosphate guanyltransferase (EC| 2.7.7.13) (GTP-mannose-1-phosphate guanylyltransferase) (GDP-mannose pyrophosphorylase) Length = 363 Score = 79.0 bits (193), Expect = 6e-15 Identities = 33/64 (51%), Positives = 49/64 (76%) Frame = -2 Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 303 V+ HA + SIVGW+ST+G W+R+EN+++LG+DV V DE+Y NGG +LPHK I ++I P Sbjct: 299 VRDHAWVKSSIVGWNSTLGSWSRLENVSVLGDDVVVNDEIYVNGGSILPHKSISANIEVP 358 Query: 302 EIVM 291 ++ Sbjct: 359 GTIV 362
>MPG1_SULAC (P37820) Putative mannose-1-phosphate guanyltransferase (EC| 2.7.7.13) (ATP-mannose-1-phosphate guanylyltransferase) (GDP-mannose pyrophosphorylase) (NDP-hexose pyrophosphorylase) Length = 359 Score = 37.7 bits (86), Expect = 0.016 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -2 Query: 464 ISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSN-GGVVLPHKEIKSSI 312 I S++G ++GKW RV+ I+G+ V + D+V+ N ++LP KE+ S+ Sbjct: 301 IKESVIGDEVSLGKWNRVDG-AIIGDGVLIHDQVFINRDTIILPDKEVAESV 351
>LRFN2_MACFA (Q9BE71) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 789 Score = 32.0 bits (71), Expect = 0.88 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 207 KQRTHEEIYDRFSPCGAGAGTAARSPHS 290 K + EE+ D +P G GAGT+AR HS Sbjct: 666 KSQRKEELLDSRTPAGRGAGTSARGHHS 693
>LRFN2_HUMAN (Q9ULH4) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 789 Score = 32.0 bits (71), Expect = 0.88 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 207 KQRTHEEIYDRFSPCGAGAGTAARSPHS 290 K + EE+ D +P G GAGT+AR HS Sbjct: 666 KSQRKEELLDSRTPAGRGAGTSARGHHS 693
>TILS_TROW8 (Q83I94) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 407 Score = 31.2 bits (69), Expect = 1.5 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -3 Query: 292 CECGDRAAVPAPAPHGEKRSYI--SSCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVS 119 C C R P P P E RSY SC +C+ A F S VFIR + LD++ Sbjct: 190 CSCDSRPYPPPPEPRNENRSYFPHPSC-KCVEGSATRFTNADIDSRFGVFIRPF--LDIT 246 Query: 118 Q 116 + Sbjct: 247 R 247
>TILS_TROWT (Q83MT2) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 415 Score = 31.2 bits (69), Expect = 1.5 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = -3 Query: 292 CECGDRAAVPAPAPHGEKRSYI--SSCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVS 119 C C R P P P E RSY SC +C+ A F S VFIR + LD++ Sbjct: 198 CSCDSRPYPPPPEPRNENRSYFPHPSC-KCVEGSATRFTNADIDSRFGVFIRPF--LDIT 254 Query: 118 Q 116 + Sbjct: 255 R 255
>GLMU_DEIRA (Q9RW61) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 484 Score = 31.2 bits (69), Expect = 1.5 Identities = 14/36 (38%), Positives = 23/36 (63%) Frame = -2 Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375 +K H+ + + VG S VG +AR+ ++LGE VH+ Sbjct: 314 IKAHSVLEQAEVGAGSDVGPFARLRPGSVLGEGVHI 349
>LRFN2_MOUSE (Q80TG9) Leucine-rich repeat and fibronectin type-III| domain-containing protein 2 precursor Length = 788 Score = 30.8 bits (68), Expect = 2.0 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +3 Query: 207 KQRTHEEIYDRFSPCGAGAGTAARSPHS 290 K + EE+ D +P G GAGT++R HS Sbjct: 667 KSQRKEELLDSRTPAGRGAGTSSRGHHS 694
>PRP4_BOVIN (P18917) Placental prolactin-related protein 4 precursor (PLP-III)| Length = 239 Score = 30.8 bits (68), Expect = 2.0 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 5/41 (12%) Frame = -3 Query: 265 PAPAPHGEKRSY---ISSCVRCLLLVAELFVCKS--CPSNC 158 PAP+ HG + +Y SC+ LL+++ L +C+ CPS C Sbjct: 3 PAPSFHGHQWTYNLVRGSCLLLLLVMSNLLLCQGILCPSLC 43
>GLMU_METCA (Q60CR2) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 461 Score = 30.0 bits (66), Expect = 3.3 Identities = 13/36 (36%), Positives = 23/36 (63%) Frame = -2 Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375 V ++ I G+++G S VG +AR+ ++L E VH+ Sbjct: 308 VLANSVIEGAVIGAGSRVGPFARLRPESVLAEGVHI 343
>SERC2_HUMAN (Q96SA4) Serine incorporator 2 (Tumor differentially expressed| 2-like) Length = 456 Score = 30.0 bits (66), Expect = 3.3 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -3 Query: 223 SCVRCLLLVAELFVCKSCPSNCQVFIRLYVCLDVSQVFSFFIFGRQNVSRLNLSPG 56 SC CL A +C CP++ + +F+FF+F VS + LSPG Sbjct: 12 SCASCLCGSAPCILCSCCPASRNSTVS-------RLIFTFFLFLGVLVSIIMLSPG 60
>PRL_PIG (P01238) Prolactin precursor (PRL)| Length = 229 Score = 29.6 bits (65), Expect = 4.4 Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 9/36 (25%) Frame = -3 Query: 223 SCVRCLLLVAELFVCKS------CPS---NCQVFIR 143 S + LLLV+ LF+CKS CPS NCQV +R Sbjct: 11 SLLLLLLLVSNLFLCKSVASLPICPSGAVNCQVSLR 46
>CCR9_HUMAN (P51686) C-C chemokine receptor type 9 (C-C CKR-9) (CC-CKR-9)| (CCR-9) (GPR-9-6) (G-protein coupled receptor 28) (CDw199 antigen) Length = 357 Score = 29.3 bits (64), Expect = 5.7 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -3 Query: 211 CLLLVAELFVCKSCPSNCQVFIRLYVCLDVSQVFSFF 101 C+LLV + SNC V + +C V+Q +FF Sbjct: 260 CILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIAFF 296
>PRL_HORSE (P12420) Prolactin precursor (PRL)| Length = 229 Score = 29.3 bits (64), Expect = 5.7 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 10/44 (22%) Frame = -3 Query: 244 EKRSYIS-SCVRCLLLVAELFVCKS------CPS---NCQVFIR 143 +KRS + S + LLLV++L +CKS CPS NCQV +R Sbjct: 3 KKRSSLKGSLLLLLLLVSDLLLCKSVASLPICPSGAVNCQVSLR 46
>DAPD_WIGBR (Q8D2G0) 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate| N-succinyltransferase (EC 2.3.1.117) (Tetrahydrodipicolinate N-succinyltransferase) (THP succinyltransferase) (Tetrahydropicolinate succinylase) Length = 274 Score = 28.9 bits (63), Expect = 7.5 Identities = 13/41 (31%), Positives = 25/41 (60%) Frame = -2 Query: 458 GSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLP 336 G+ +G +ST+ W+ + + +G++VH+ V GGV+ P Sbjct: 131 GAYIGENSTIDTWSTIGSCAQIGKNVHISGGV-GIGGVLEP 170
>SCPB_MYCGA (Q7NB77) Segregation and condensation protein B| Length = 291 Score = 28.9 bits (63), Expect = 7.5 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = -2 Query: 215 SLFIIGRRAVCLQELSIQLPSVHQALCMFRRVASFFFLY 99 +L++ GR + LQEL+ LP +HQ +F+ + + Y Sbjct: 111 ALYVAGRNGMTLQELNKILPKIHQDQ-LFKELEEMIYSY 148
>OPT3_ARATH (O23482) Probable oligopeptide transporter 3 (AtOPT3)| Length = 737 Score = 28.9 bits (63), Expect = 7.5 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +3 Query: 27 IHLTPIYKLKPGLKFNRDTFCLPKIKKEKTCDTSKHT*SLMNTWQLD--GQLLQT 185 ++L+P++ L G F R T L + D K T S +NT +LD G+L+Q+ Sbjct: 357 LYLSPLFALSIGSGFARFTATLTHVALFNGRDIWKQTWSAVNTTKLDIHGKLMQS 411
>GLMU_RALEJ (Q476S2) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 454 Score = 28.9 bits (63), Expect = 7.5 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -2 Query: 464 ISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKE 327 I + +G +G +AR+ T LGEDVH+ + V V H + Sbjct: 311 IDSAKIGADGRIGPYARLRPGTELGEDVHIGNFVEVKNSQVAAHSK 356
>NEB2_HUMAN (Q96SB3) Neurabin-2 (Neurabin-II) (Spinophilin) (Protein| phosphatase 1 regulatory subunit 9B) Length = 815 Score = 28.5 bits (62), Expect = 9.7 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +3 Query: 225 EIYDRFSPCGAGAGTAARSPHSHDNLGLEDAGLDLLVR 338 ++++R +P G AAR + GL+D LD++VR Sbjct: 149 KLFERSAPAAGGDKEAARRLLRQERAGLQDRKLDVVVR 186
>GLMU_PSEU2 (Q4ZL26) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 455 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -2 Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375 VK ++ I G+I+G S G +AR+ ++LG HV Sbjct: 306 VKANSHIEGAILGEGSDAGPFARLRPGSVLGAKAHV 341
>GLMU_PSE14 (Q48BG7) Bifunctional protein glmU [Includes:| UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] Length = 455 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -2 Query: 482 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHV 375 VK ++ I G+I+G S G +AR+ ++LG HV Sbjct: 306 VKANSHIEGAILGEGSDAGPFARLRPGSVLGAKAHV 341 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,287,333 Number of Sequences: 219361 Number of extensions: 1358545 Number of successful extensions: 4143 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 4029 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4135 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)