| Clone Name | rbaet114h10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY720933.1| Oryza sativa (indica cultivar-group) beta-cyanoalanine synthase (CAS) mRNA, complete cds Length = 1406 Score = 194 bits (98), Expect = 2e-46 Identities = 186/214 (86%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 247 gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 306 |||||||||| |||||||| ||||||||||| ||| ||||||| ||||||| || || | Sbjct: 1098 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 1039 Query: 307 ccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgtg 366 | ||||| |||||||||||||| || ||||| |||||||| | ||| ||||||| | | | Sbjct: 1038 ctgtgttagctcctgatgatattccaaccagaagaccctccttcagtgccaattctcgag 979 Query: 367 ccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatccatgtcca 426 ||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | || Sbjct: 978 ccatcttaacagcatcctcacctttcacctcaagaaccttttccattatatccatattca 919 Query: 427 aaatgtctggcttgaat-ccactccatttccagt 459 |||| || ||||| ||| |||||||||||||||| Sbjct: 918 aaatttccggcttaaatcccactccatttccagt 885 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 149 tccaagttagtccactggcactggctgcatagcctcggcctcc 191 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1196 tccaagttagtccactggcactggctgcatggcctcagcctcc 1154
>ref|XM_474584.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1134 Score = 186 bits (94), Expect = 4e-44 Identities = 185/214 (86%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 247 gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 306 |||||||||| |||||||| ||||||||||| ||| ||||||| ||||||| || || | Sbjct: 1042 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 983 Query: 307 ccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgtg 366 | ||||| |||||||||||||| || ||||| |||||||| | ||| ||||||| | | | Sbjct: 982 ctgtgttagctcctgatgatattccaaccagaagaccctccttcagtgccaattctcgag 923 Query: 367 ccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatccatgtcca 426 ||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 922 ccatcttaacagcatcctcacctttcacctcaataaccttttccattatatccatattca 863 Query: 427 aaatgtctggcttgaat-ccactccatttccagt 459 |||| || ||||| ||| |||||||||||||||| Sbjct: 862 aaatttccggcttaaatcccactccatttccagt 829 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 155 ttagtccactggcactggctgcatagcctcggcctcc 191 |||||||||||||||||||||||| ||||| |||||| Sbjct: 1134 ttagtccactggcactggctgcatggcctcagcctcc 1098
>dbj|AK102512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095I16, full insert sequence Length = 1436 Score = 186 bits (94), Expect = 4e-44 Identities = 185/214 (86%), Gaps = 1/214 (0%) Strand = Plus / Minus Query: 247 gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 306 |||||||||| |||||||| ||||||||||| ||| ||||||| ||||||| || || | Sbjct: 1098 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 1039 Query: 307 ccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgtg 366 | ||||| |||||||||||||| || ||||| |||||||| | ||| ||||||| | | | Sbjct: 1038 ctgtgttagctcctgatgatattccaaccagaagaccctccttcagtgccaattctcgag 979 Query: 367 ccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatccatgtcca 426 ||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| | || Sbjct: 978 ccatcttaacagcatcctcacctttcacctcaataaccttttccattatatccatattca 919 Query: 427 aaatgtctggcttgaat-ccactccatttccagt 459 |||| || ||||| ||| |||||||||||||||| Sbjct: 918 aaatttccggcttaaatcccactccatttccagt 885 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 149 tccaagttagtccactggcactggctgcatagcctcggcctcc 191 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1196 tccaagttagtccactggcactggctgcatggcctcagcctcc 1154
>gb|AY107771.1| Zea mays PCO121395 mRNA sequence Length = 1573 Score = 109 bits (55), Expect = 8e-21 Identities = 221/275 (80%), Gaps = 1/275 (0%) Strand = Plus / Minus Query: 186 gcctccttcctcagaccctcgaacagcgccgacgataagtatcgctctcccgcgcttgga 245 |||||||||||||| | ||||||||||| ||||| | ||| ||||| || ||| ||| Sbjct: 1286 gcctccttcctcagctcatcgaacagcgcggacgacaggtaccgctcgccaaggctcgga 1227 Query: 246 tgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcc 305 |||| |||||||||||||| || ||||| || |||||||| || || || | || || Sbjct: 1226 agaacggtcacgatgagcttccccttgttctccggcctcttggctagctcgagagcagca 1167 Query: 306 accgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgt 365 || ||||||||||| ||||||||||| |||| |||||||| | | |||| | | | Sbjct: 1166 acggtgttggctcccgatgatatcccgaccaaaagaccctccttgactgccagctctcga 1107 Query: 366 gccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatccatgtcc 425 ||||||||||| || ||||||||||||||||| || ||||| ||||| | ||||||||| Sbjct: 1106 gccatcttgacggcgtcctcacctttcacctcgagcaccttttccatcacgtccatgtcc 1047 Query: 426 aaaatgtctggcttgaatcc-actccatttccagt 459 | ||| ||||||||||| || ||||| |||||||| Sbjct: 1046 agaatatctggcttgaaccctactccgtttccagt 1012
>gb|DQ471309.1| Malus x domestica beta-cyanoalanine synthase 2 mRNA, complete cds Length = 1486 Score = 81.8 bits (41), Expect = 2e-12 Identities = 161/201 (80%) Strand = Plus / Minus Query: 246 tgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcc 305 ||||||||||| ||||| || ||||||||||||||| | || ||||| || || |||||| Sbjct: 1104 tgaacagtcacaatgagtttgcctttgttttcaggctttttagcaagctccattgctgcc 1045 Query: 306 accgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgt 365 || ||||||||||| || ||||| ||||||| || || |||| ||| ||||||||| | Sbjct: 1044 actgtgttggctccagacgatattcccaccataagcccttctttcagtgccaattgtctt 985 Query: 366 gccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatccatgtcc 425 ||||| || || ||||| || | ||||||| || | ||||| |||||||||||| Sbjct: 984 gccatgtttactgcatcttcgctacgaacctcaatcactctttccatcatatccatgtcc 925 Query: 426 aaaatgtctggcttgaatcca 446 || || ||||| ||||||||| Sbjct: 924 aatatatctggtttgaatcca 904
>gb|DQ428338.1| Sorghum propinquum locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428337.1| Sorghum bicolor voucher PI585454 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428336.1| Sorghum bicolor voucher PI267539 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428335.1| Sorghum bicolor voucher PI267408 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428334.1| Sorghum bicolor voucher PI221607 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428333.1| Sorghum bicolor voucher PI152702 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428332.1| Sorghum bicolor voucher NSL92371 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428331.1| Sorghum bicolor voucher NSL87902 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428330.1| Sorghum bicolor voucher NSL87666 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428329.1| Sorghum bicolor voucher NSL77217 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428328.1| Sorghum bicolor voucher NSL77034 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428327.1| Sorghum bicolor voucher NSL56174 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428326.1| Sorghum bicolor voucher NSL56003 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428325.1| Sorghum bicolor voucher NSL55243 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428324.1| Sorghum bicolor voucher NSL51365 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428323.1| Sorghum bicolor voucher NSL51030 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428322.1| Sorghum bicolor voucher NSL50875 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>gb|DQ428321.1| Sorghum bicolor voucher BTx623 locus PRC0362 genomic sequence Length = 766 Score = 79.8 bits (40), Expect = 7e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcc-actcca 451 |||||||||||||| ||||||| |||||| ||||||||||||||||| || || |||||| Sbjct: 727 acctcaagaaccttttccattacatccatatccaaaatgtctggcttaaaccctactcca 668 Query: 452 tttccagt 459 |||||||| Sbjct: 667 tttccagt 660
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaat-ccactcca 451 |||||||||||||| |||||||||||||| | |||||| || ||||| ||| |||||||| Sbjct: 94974 acctcaagaaccttttccattatatccatattcaaaatttccggcttaaatcccactcca 95033 Query: 452 tttccagt 459 |||||||| Sbjct: 95034 tttccagt 95041 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 149 tccaagttagtccactggcactggctgcatagcctcggcctcc 191 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 93999 tccaagttagtccactggcactggctgcatggcctcagcctcc 94041 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 333 accagcagaccctcttgcagcgccaattgttgtgccatcttgacagcatcctcacctttc 392 ||||| |||||||| | ||| ||||||| | | |||||||| |||||||||||||||||| Sbjct: 94494 accagaagaccctccttcagtgccaattctcgagccatcttaacagcatcctcacctttc 94553 Query: 393 acct 396 |||| Sbjct: 94554 acct 94557 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 258 atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 317 |||||||| ||||||||||| ||| ||||||| ||||||| || || || ||||| ||| Sbjct: 94199 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 94258 Query: 318 cctgatgatat 328 ||||||||||| Sbjct: 94259 cctgatgatat 94269
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 149 tccaagttagtccactggcactggctgcatagcctcggcctcc 191 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 57468 tccaagttagtccactggcactggctgcatggcctcagcctcc 57510 Score = 63.9 bits (32), Expect = 4e-07 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaat-ccactcca 451 ||||||| |||||| |||||||||||||| | |||||| || ||||| ||| |||||||| Sbjct: 58445 acctcaataaccttttccattatatccatattcaaaatttccggcttaaatcccactcca 58504 Query: 452 tttccagt 459 |||||||| Sbjct: 58505 tttccagt 58512 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 333 accagcagaccctcttgcagcgccaattgttgtgccatcttgacagcatcctcacctttc 392 ||||| |||||||| | ||| ||||||| | | |||||||| |||||||||||||||||| Sbjct: 57962 accagaagaccctccttcagtgccaattctcgagccatcttaacagcatcctcacctttc 58021 Query: 393 acct 396 |||| Sbjct: 58022 acct 58025 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 258 atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 317 |||||||| ||||||||||| ||| ||||||| ||||||| || || || ||||| ||| Sbjct: 57668 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 57727 Query: 318 cctgatgatat 328 ||||||||||| Sbjct: 57728 cctgatgatat 57738
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 7e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 149 tccaagttagtccactggcactggctgcatagcctcggcctcc 191 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 4429736 tccaagttagtccactggcactggctgcatggcctcagcctcc 4429778 Score = 63.9 bits (32), Expect = 4e-07 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaat-ccactcca 451 ||||||| |||||| |||||||||||||| | |||||| || ||||| ||| |||||||| Sbjct: 4430713 acctcaataaccttttccattatatccatattcaaaatttccggcttaaatcccactcca 4430772 Query: 452 tttccagt 459 |||||||| Sbjct: 4430773 tttccagt 4430780 Score = 63.9 bits (32), Expect = 4e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 333 accagcagaccctcttgcagcgccaattgttgtgccatcttgacagcatcctcacctttc 392 ||||| |||||||| | ||| ||||||| | | |||||||| |||||||||||||||||| Sbjct: 4430230 accagaagaccctccttcagtgccaattctcgagccatcttaacagcatcctcacctttc 4430289 Query: 393 acct 396 |||| Sbjct: 4430290 acct 4430293 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 258 atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 317 |||||||| ||||||||||| ||| ||||||| ||||||| || || || ||||| ||| Sbjct: 4429936 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 4429995 Query: 318 cctgatgatat 328 ||||||||||| Sbjct: 4429996 cctgatgatat 4430006
>gb|AY207389.1| Hevea brasiliensis latex beta-cyanoalanine synthase mRNA, complete cds Length = 1415 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcca 446 |||||||||||||| ||||||| |||||||||||| |||||||| || |||||| Sbjct: 950 acctcaagaaccttttccattacatccatgtccaatatgtctggtttaaatcca 897 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 240 cttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatc 299 ||||||||||||||||||||||| ||||||||||| || ||| | | |||||| || Sbjct: 1103 cttggatgaacagtcacgatgagttttcctttgttctctggcattctagcaagtctaagt 1044 Query: 300 gctgccaccgtgttggctcctgatgatatccccacca 336 || || || ||||||||||| |||||||| ||||||| Sbjct: 1043 gcagcaactgtgttggctccagatgatattcccacca 1007
>gb|AY207388.1| Hevea brasiliensis phloem beta-cyanoalanine synthase mRNA, complete cds Length = 1411 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcca 446 |||||||||||||| ||||||| |||||||||||| |||||||| || |||||| Sbjct: 934 acctcaagaaccttttccattacatccatgtccaatatgtctggtttaaatcca 881 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 240 cttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatc 299 ||||||||||||||||||||||| ||||||||||| || ||| | | |||||| || Sbjct: 1087 cttggatgaacagtcacgatgagttttcctttgttctctggcattctagcaagtctaagt 1028 Query: 300 gctgccaccgtgttggctcctgatgatatccccacca 336 || || || ||||||||||| |||||||| ||||||| Sbjct: 1027 gcagcaactgtgttggctccagatgatattcccacca 991
>dbj|AB179752.1| Diospyros kaki DkCAS2 mRNA for beta-cyanoalanine synthase, partial cds Length = 886 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 239 gcttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaat 298 |||||| |||||||||||||| || || |||||||| || ||| || |||||||| || Sbjct: 562 gcttgggtgaacagtcacgataagtttgcctttgttctctggcttccttgcaagtctaag 503 Query: 299 cgctgccaccgtgttggctcctgatgatatccccacca 336 ||||| || || || |||||||||||||||||||||| Sbjct: 502 tgctgcaactgtattagctcctgatgatatccccacca 465
>ref|NM_116009.2| Arabidopsis thaliana ATCYSC1; L-3-cyanoalanine synthase/ cysteine synthase AT3G61440 (ATCYSC1) mRNA, complete cds Length = 1431 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 300 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 359 |||||||| ||||| ||||| || |||||||| |||| ||||| |||| || |||||| Sbjct: 1100 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 1041 Query: 360 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatcc 419 | | |||||||| | ||||||||||| | ||||||||||| ||||||| | |||| Sbjct: 1040 tctctagccatctttatagcatcctcactactaacctcaagaacactctccataacatcc 981 Query: 420 atgtccaaaatgtctggcttgaatcca 446 || ||||| || ||||| ||||||||| Sbjct: 980 atatccaagatttctggtttgaatcca 954
>gb|DQ471308.1| Malus x domestica beta-cyanoalanine synthase 1 mRNA, complete cds Length = 1497 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 222 aagtatcgctctcccgcgcttggatgaacagtcacgatgagctttcctttgttttcaggc 281 ||||||||||| || ||| || ||||||||||| ||||| || ||||||||||| ||| Sbjct: 1164 aagtatcgctccccaaagctcgggtgaacagtcacaatgagtttgcctttgttttctggc 1105 Query: 282 ctctttgcaagttcaatcgctgccaccgtgttggctcctgatgatat 328 | || ||||| || || |||||||| ||||||||||| || ||||| Sbjct: 1104 tttttagcaagctccattgctgccacagtgttggctccagacgatat 1058
>emb|AJ010505.1|ATH010505 Arabidopsis thaliana mRNA for cysteine synthase Length = 1404 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 300 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 359 |||||||| ||||| ||||| || |||||||| |||| ||||| |||| || |||||| Sbjct: 1045 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 986 Query: 360 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatcc 419 | | |||||||| | ||||||||||| | ||||||||||| ||||||| | |||| Sbjct: 985 tctctagccatctttatagcatcctcactactaacctcaagaacactctccataacatcc 926 Query: 420 atgtccaaaatgtctggcttgaatcca 446 || ||||| || ||||| ||||||||| Sbjct: 925 atatccaagatttctggtttgaatcca 899
>gb|AY128782.1| Arabidopsis thaliana cysteine synthase AtcysC1 (At3g61440) mRNA, complete cds Length = 1142 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 300 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 359 |||||||| ||||| ||||| || |||||||| |||| ||||| |||| || |||||| Sbjct: 962 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 903 Query: 360 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatcc 419 | | |||||||| | ||||||||||| | ||||||||||| ||||||| | |||| Sbjct: 902 tctctagccatctttatagcatcctcactactaacctcaagaacactctccataacatcc 843 Query: 420 atgtccaaaatgtctggcttgaatcca 446 || ||||| || ||||| ||||||||| Sbjct: 842 atatccaagatttctggtttgaatcca 816
>gb|AY093094.1| Arabidopsis thaliana cysteine synthase AtcysC1 (At3g61440) mRNA, complete cds Length = 1429 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 300 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 359 |||||||| ||||| ||||| || |||||||| |||| ||||| |||| || |||||| Sbjct: 1102 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 1043 Query: 360 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatcc 419 | | |||||||| | ||||||||||| | ||||||||||| ||||||| | |||| Sbjct: 1042 tctctagccatctttatagcatcctcactactaacctcaagaacactctccataacatcc 983 Query: 420 atgtccaaaatgtctggcttgaatcca 446 || ||||| || ||||| ||||||||| Sbjct: 982 atatccaagatttctggtttgaatcca 956
>emb|BX824123.1|CNS0A5MX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH24ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1240 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 300 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 359 |||||||| ||||| ||||| || |||||||| |||| ||||| |||| || |||||| Sbjct: 997 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 938 Query: 360 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatcc 419 | | |||||||| | ||||||||||| | ||||||||||| ||||||| | |||| Sbjct: 937 tctctagccatctttatagcatcctcactactaacctcaagaacactctccataacatcc 878 Query: 420 atgtccaaaatgtctggcttgaatcca 446 || ||||| || ||||| ||||||||| Sbjct: 877 atatccaagatttctggtttgaatcca 851
>gb|AY087208.1| Arabidopsis thaliana clone 32851 mRNA, complete sequence Length = 1416 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 300 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 359 |||||||| ||||| ||||| || |||||||| |||| ||||| |||| || |||||| Sbjct: 1100 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 1041 Query: 360 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatcc 419 | | |||||||| | ||||||||||| | ||||||||||| ||||||| | |||| Sbjct: 1040 tctctagccatctttatagcatcctcactactaacctcaagaacactctccataacatcc 981 Query: 420 atgtccaaaatgtctggcttgaatcca 446 || ||||| || ||||| ||||||||| Sbjct: 980 atatccaagatttctggtttgaatcca 954
>dbj|AB024282.1| Arabidopsis thaliana AtcysC1 mRNA for cysteine synthase, complete cds Length = 1350 Score = 61.9 bits (31), Expect = 2e-06 Identities = 118/147 (80%) Strand = Plus / Minus Query: 300 gctgccaccgtgttggctcctgatgatatccccaccagcagaccctcttgcagcgccaat 359 |||||||| ||||| ||||| || |||||||| |||| ||||| |||| || |||||| Sbjct: 1016 gctgccacggtgttagctcccgacgatatcccaaccatgagaccttctttcaatgccaat 957 Query: 360 tgttgtgccatcttgacagcatcctcacctttcacctcaagaaccttctccattatatcc 419 | | |||||||| | ||||||||||| | ||||||||||| ||||||| | |||| Sbjct: 956 tctctagccatctttatagcatcctcactactaacctcaagaacactctccataacatcc 897 Query: 420 atgtccaaaatgtctggcttgaatcca 446 || ||||| || ||||| ||||||||| Sbjct: 896 atatccaagatttctggtttgaatcca 870
>gb|AF417300.1| Castanea sativa putative cysteine synthase mRNA, partial cds Length = 662 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaa 442 ||||||||||| || ||||||| ||||||||||||||| ||||| ||||| Sbjct: 83 acctcaagaactttttccattacatccatgtccaaaatatctggtttgaa 34
>dbj|AB179751.1| Diospyros kaki DkCAS1 mRNA for beta-cyanoalanine synthase, partial cds Length = 826 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Minus Query: 239 gcttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaat 298 |||||||||||||||||| |||||||| |||||||| || ||||| | |||||| || Sbjct: 562 gcttggatgaacagtcacaatgagcttgcctttgttctctggccttctagcaagtctaag 503 Query: 299 cgctgccaccgtgttggctcctgatgatatccccacca 336 ||||| || ||||| || || |||||||| ||||||| Sbjct: 502 tgctgcaactgtgttagcccccgatgatattcccacca 465 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 408 tccattatatccatgtccaaaatgtctggcttgaatcca 446 ||||||| |||||||||||| || ||||| ||||||||| Sbjct: 393 tccattacatccatgtccaatatatctggtttgaatcca 355
>gb|AY154650.1| Betula pendula beta-cyanoalanine synthase mRNA, complete cds Length = 1059 Score = 54.0 bits (27), Expect = 4e-04 Identities = 108/135 (80%) Strand = Plus / Minus Query: 312 ttggctcctgatgatatccccaccagcagaccctcttgcagcgccaattgttgtgccatc 371 |||||||| |||||||| |||||||| || ||||| | ||| || ||||| |||||| Sbjct: 902 ttggctccagatgatattcccaccagaagtccctccttcagtgctaattgccttgccata 843 Query: 372 ttgacagcatcctcacctttcacctcaagaaccttctccattatatccatgtccaaaatg 431 || || | ||| |||| | ||||||||||| | ||||| | ||||||||||||||| Sbjct: 842 tttactgaatcttcactactaacctcaagaactctttccataacatccatgtccaaaata 783 Query: 432 tctggcttgaatcca 446 ||||| ||||||||| Sbjct: 782 tctggtttgaatcca 768
>gb|AC139601.8| Medicago truncatula clone mth2-8h11, complete sequence Length = 126204 Score = 50.1 bits (25), Expect = 0.006 Identities = 41/45 (91%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 416 atccatgtccaaaatgtctggcttgaatcc-actccatttccagt 459 |||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 20828 atccatgtccaatatgtctggtttgaatccaacaccatttccagt 20872
>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5) Length = 2199546 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 261 agctttcctttgttttcaggcct 283 ||||||||||||||||||||||| Sbjct: 1225934 agctttcctttgttttcaggcct 1225956
>dbj|AB029338.1| Solanum tuberosum PCAS-2 mRNA for beta-cyanoalanine synthase like protein, complete cds Length = 1250 Score = 46.1 bits (23), Expect = 0.10 Identities = 50/59 (84%) Strand = Plus / Minus Query: 219 gataagtatcgctctcccgcgcttggatgaacagtcacgatgagctttcctttgttttc 277 ||||||||||||||||| |||| ||| |||||||| ||||| || ||||||||||| Sbjct: 1075 gataagtatcgctctccaaaacttgcatgtacagtcactatgagtttgcctttgttttc 1017
>emb|AL132962.1|ATF2A19 Arabidopsis thaliana DNA chromosome 3, BAC clone F2A19 Length = 95993 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Minus Query: 393 acctcaagaaccttctccattatatccatgtccaaaatgtctggcttgaatcca 446 ||||||||||| ||||||| | |||||| ||||| || ||||| ||||||||| Sbjct: 31448 acctcaagaacactctccataacatccatatccaagatttctggtttgaatcca 31395
>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24, complete sequence Length = 155029 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 ttcaactgttgtttacacaatg 47 |||||||||||||||||||||| Sbjct: 70301 ttcaactgttgtttacacaatg 70280
>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18, complete sequence Length = 153244 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 26 ttcaactgttgtttacacaatg 47 |||||||||||||||||||||| Sbjct: 70291 ttcaactgttgtttacacaatg 70270
>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence Length = 190616 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 163 ctggcactggctgcatagcct 183 ||||||||||||||||||||| Sbjct: 27462 ctggcactggctgcatagcct 27442
>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence Length = 181156 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 179 agcctcggcctccttcctcagaccc 203 ||||| ||||||||||||||||||| Sbjct: 135981 agcctaggcctccttcctcagaccc 135957
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 162 actggcactggctgcatagcctcggcctccttcctca 198 ||||||||||| |||| |||||| |||||||| |||| Sbjct: 101172 actggcactggttgcacagcctcagcctcctttctca 101208
>gb|AY766094.1| Allium sativum cysteine synthase GCS3 (gcs3) mRNA, complete cds Length = 1296 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 gctcctgatgatatccccaccagca 339 ||||||||||||||||| ||||||| Sbjct: 942 gctcctgatgatatcccaaccagca 918
>gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosome 3, complete sequence Length = 227492 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 ctggcactggctgcatagcct 183 ||||||||||||||||||||| Sbjct: 10913 ctggcactggctgcatagcct 10933
>emb|Z22784.1|MMTROPIB M.musculus troponin I gene Length = 5691 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 agcctcggcctccttcctcagaccc 203 ||||| ||||||||||||||||||| Sbjct: 3376 agcctaggcctccttcctcagaccc 3400
>ref|XM_778863.1| PREDICTED: Strongylocentrotus purpuratus similar to dystonin isoform 1 (LOC578708), mRNA Length = 33630 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 102 ttgcaacatggtaatgcagtg 122 ||||||||||||||||||||| Sbjct: 10211 ttgcaacatggtaatgcagtg 10191
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 162 actggcactggctgcatagcctcggcctccttcctca 198 ||||||||||| |||| |||||| |||||||| |||| Sbjct: 18365807 actggcactggttgcacagcctcagcctcctttctca 18365843
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 162 actggcactggctgcatagcctcggcctccttcctca 198 ||||||||||| |||| |||||| |||||||| |||| Sbjct: 18525208 actggcactggttgcacagcctcagcctcctttctca 18525244
>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome Length = 2843201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 tttcaggcctctttgcaagtt 294 ||||||||||||||||||||| Sbjct: 2435669 tttcaggcctctttgcaagtt 2435649
>gb|AE010437.1| Methanopyrus kandleri AV19 section 136 of 157 of the complete genome Length = 12131 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 gcatcctcacctttcacctc 397 |||||||||||||||||||| Sbjct: 4131 gcatcctcacctttcacctc 4112
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 cattatatccatgtccaaaatgtc 433 |||||||||||| ||||||||||| Sbjct: 173648 cattatatccatatccaaaatgtc 173625
>gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete sequence Length = 163674 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 ggtaatgcagtgaatttatt 130 |||||||||||||||||||| Sbjct: 6137 ggtaatgcagtgaatttatt 6156
>emb|BX914222.9| Zebrafish DNA sequence from clone DKEYP-108A2 in linkage group 11, complete sequence Length = 134368 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 408 tccattatatccatgtccaaaatg 431 |||||||||||||||| ||||||| Sbjct: 86329 tccattatatccatgttcaaaatg 86352
>emb|X72803.1|CTHIS C.thummi genes for histones H1, H2A, H3 and H4 Length = 6696 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 tccacatgaaggaacaaacc 67 |||||||||||||||||||| Sbjct: 3 tccacatgaaggaacaaacc 22
>emb|AL669871.18| Mouse DNA sequence from clone RP23-48J15 on chromosome 11 Contains a novel gene and a novel pseudogene, complete sequence Length = 208519 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctttcctttgttttcaggcc 282 |||||||||||||||||||| Sbjct: 202686 ctttcctttgttttcaggcc 202667
>gb|AC103782.2| Homo sapiens chromosome 8, clone RP11-653G3, complete sequence Length = 96122 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 acctttcacctcaagaacct 405 |||||||||||||||||||| Sbjct: 70788 acctttcacctcaagaacct 70807
>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169964 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ttcctttgttttcaggcctc 284 |||||||||||||||||||| Sbjct: 10065 ttcctttgttttcaggcctc 10084
>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178752 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 ttcctttgttttcaggcctc 284 |||||||||||||||||||| Sbjct: 168 ttcctttgttttcaggcctc 149
>gb|AC012543.4|AC012543 Homo sapiens, clone RP11-1K11, complete sequence Length = 159697 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 acctttcacctcaagaacct 405 |||||||||||||||||||| Sbjct: 138866 acctttcacctcaagaacct 138847
>gb|U77354.1|RNU77354 Rattus norvegicus troponin I gene, complete cds Length = 4517 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 agcctcggcctccttcctcagacc 202 ||||| |||||||||||||||||| Sbjct: 2694 agcctaggcctccttcctcagacc 2717
>dbj|AB027000.1| Solanum tuberosum PCAS-1 mRNA for beta-cyanoalanine synthase, complete cds Length = 1206 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 252 gtcacgatgagctttcctttgttttcaggcct 283 ||||| ||||| |||||||||||||| ||||| Sbjct: 993 gtcactatgagttttcctttgttttctggcct 962 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,092,690 Number of Sequences: 3902068 Number of extensions: 4092690 Number of successful extensions: 69433 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 69211 Number of HSP's gapped (non-prelim): 196 length of query: 459 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 437 effective length of database: 17,147,199,772 effective search space: 7493326300364 effective search space used: 7493326300364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)