ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet114h04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 145 1e-31
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
3dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
4dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
5gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase ... 86 9e-14
6gb|AY103775.1| Zea mays PCO076979 mRNA sequence 86 9e-14
7emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransgly... 84 4e-13
8emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 78 2e-11
9gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (T... 76 9e-11
10gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence 72 1e-09
11gb|BT014685.1| Oryza sativa AK104912 mRNA sequence 72 1e-09
12dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
13dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
14dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
15dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
16gb|AY106776.1| Zea mays PCO076978 mRNA sequence 72 1e-09
17dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 66 8e-08
18gb|AY103891.1| Zea mays PCO065722 mRNA sequence 62 1e-06
19gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence 52 0.001
20gb|DQ100340.1| Eucalyptus globulus putative xyloglucan endotrans... 52 0.001
21gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotran... 52 0.001
22dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein... 52 0.001
23emb|AJ555155.1|CSA555155 Cucumis sativus XTH3 gene for putative ... 46 0.078
24emb|AJ555126.1|CSA555126 Cucumis sativus mRNA for putative xylog... 46 0.078
25gb|AY105365.1| Zea mays PCO092487 mRNA sequence 46 0.078
26gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase h... 46 0.078
27gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase h... 46 0.078
28ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predic... 44 0.31
29gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase m... 44 0.31
30gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase... 44 0.31
31emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4,... 44 0.31
32emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan end... 44 0.31
33dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.31
34dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.31
35gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hyd... 42 1.2
36emb|AL157366.12| Human DNA sequence from clone RP11-467D10 on ch... 42 1.2
37dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endot... 42 1.2
38gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase... 42 1.2
39dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferas... 42 1.2
40ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.8
41ref|XM_502003.1| Yarrowia lipolytica CLIB122, YALI0C19217g predi... 40 4.8
42gb|AC035143.5| Homo sapiens chromosome 5 clone CTD-2069C21, comp... 40 4.8
43gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex B... 40 4.8
44dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
45gb|AC008854.3|AC008854 Homo sapiens chromosome 5 clone CTD-2177J... 40 4.8
46dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
47dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
48dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endot... 40 4.8
49gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 4.8
50gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan ... 40 4.8
51emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 4.8
52dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transf... 40 4.8 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEA)
          Length = 1174

 Score =  145 bits (73), Expect = 1e-31
 Identities = 97/105 (92%)
 Strand = Plus / Minus

                                                                       
Query: 258 ggggactacatggagcactcggcaaaaacgcccttggcgacccgcttggggtcagtgcag 317
           |||||||||||||||||||||||    |||||||||||||| ||||||||||||||||||
Sbjct: 932 ggggactacatggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcag 873

                                                        
Query: 318 tagttgtagatcatgtaattgctctgcacccaacgcatgcgctgc 362
           |||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 872 tagttgtagatcatgtaattgctctgtacccaccgcatccgctgc 828



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 164  ccccatttttcctatctcaagccgtcttcctccggcgatcaacggatac 212
            |||||| || ||||||||  |||||||||||||||||||| ||| ||||
Sbjct: 1016 ccccatcttccctatctccggccgtcttcctccggcgatcgacgtatac 968
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                            
Query: 265      acatggagcactcggcaaaaacgcccttggcgacccgcttggggtcagtgcagtagttgt 324
                ||||||||||||||||    ||||||| || ||  |||||||| || |||||||||||||
Sbjct: 28773068 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 28773127

                                                      
Query: 325      agatcatgtaattgctctgcacccaacgcatgcgctgc 362
                |||||||||| |||||||||||||| ||||| ||||||
Sbjct: 28773128 agatcatgtacttgctctgcacccaccgcatccgctgc 28773165



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 299      ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
                |||||||| ||||||||||||||||||||||||| | || ||||||||||| | ||||||
Sbjct: 28750656 ccgcttggcgtcagtgcagtagttgtagatcatgaacttcctctgcacccacctcatgcg 28750597
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>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0028E05
          Length = 157631

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                         
Query: 265   acatggagcactcggcaaaaacgcccttggcgacccgcttggggtcagtgcagtagttgt 324
             ||||||||||||||||    ||||||| || ||  |||||||| || |||||||||||||
Sbjct: 80843 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 80902

                                                   
Query: 325   agatcatgtaattgctctgcacccaacgcatgcgctgc 362
             |||||||||| |||||||||||||| ||||| ||||||
Sbjct: 80903 agatcatgtacttgctctgcacccaccgcatccgctgc 80940



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                         
Query: 299   ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
             |||||||| ||||||||||||||||||||||||| | || ||||||||||| | ||||||
Sbjct: 58431 ccgcttggcgtcagtgcagtagttgtagatcatgaacttcctctgcacccacctcatgcg 58372
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>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full
           insert sequence
          Length = 1253

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 85/98 (86%)
 Strand = Plus / Minus

                                                                       
Query: 265 acatggagcactcggcaaaaacgcccttggcgacccgcttggggtcagtgcagtagttgt 324
           ||||||||||||||||    ||||||| || ||  |||||||| || |||||||||||||
Sbjct: 989 acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 930

                                                 
Query: 325 agatcatgtaattgctctgcacccaacgcatgcgctgc 362
           |||||||||| |||||||||||||| ||||| ||||||
Sbjct: 929 agatcatgtacttgctctgcacccaccgcatccgctgc 892
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>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA,
           complete cds
          Length = 1056

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                       
Query: 272 gcactcggcaaaaacgcccttggcgacccgcttggggtcagtgcagtagttgtagatcat 331
           ||||||||||   |||||||  || |||||||||||||| ||||||||||||||||||||
Sbjct: 855 gcactcggcaggcacgccctgcgccacccgcttggggtcggtgcagtagttgtagatcat 796

                                      
Query: 332 gtaattgctctgcacccaacgcatgcg 358
           | | || ||||||||||| ||||||||
Sbjct: 795 gaacttcctctgcacccaccgcatgcg 769
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>gb|AY103775.1| Zea mays PCO076979 mRNA sequence
          Length = 1495

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                       
Query: 300 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcgc 359
           ||||||||||| ||||||||||||||||||||||| |||| ||||||||| ||||| |||
Sbjct: 994 cgcttggggtcggtgcagtagttgtagatcatgtacttgcgctgcacccagcgcatccgc 935

              
Query: 360 tgc 362
           |||
Sbjct: 934 tgc 932
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>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEB)
          Length = 1226

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                       
Query: 297 acccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatg 356
           |||||||||||||| ||||||||||||||||||||| | || ||||||||||| ||||||
Sbjct: 933 acccgcttggggtcggtgcagtagttgtagatcatgaacttcctctgcacccaccgcatg 874

             
Query: 357 cg 358
           ||
Sbjct: 873 cg 872
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>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                      
Query: 300 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           ||||||||||| ||||||||||||||||||||| | || ||||||||||| ||||||||
Sbjct: 947 cgcttggggtcggtgcagtagttgtagatcatgaacttcctctgcacccagcgcatgcg 889
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>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to
           marker R11, genomic sequence
          Length = 224

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                       
Query: 265 acatggagcactcggcaaaaacgcccttggcgacccgcttggggtcagtgcagtagttgt 324
           ||||||||||||||||    ||||||| || ||  |||||||| || |||||||||||||
Sbjct: 82  acatggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgt 23

                                 
Query: 325 agatcatgtaattgctctgcac 346
           |||||||||| |||||||||||
Sbjct: 22  agatcatgtacttgctctgcac 1
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>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence
          Length = 977

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 299 ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           |||||||| ||| ||||||||||||||||||||| | || ||||||||||| ||||||||
Sbjct: 262 ccgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcacccagcgcatgcg 321
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>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence
          Length = 807

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 299 ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           |||||||| ||||||||||||||||||||||||| | || ||||||||||| | ||||||
Sbjct: 768 ccgcttggcgtcagtgcagtagttgtagatcatgaacttcctctgcacccacctcatgcg 709
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0622F03
          Length = 170064

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 299    ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
              |||||||| ||||||||||||||||||||||||| | || ||||||||||| | ||||||
Sbjct: 151222 ccgcttggcgtcagtgcagtagttgtagatcatgaacttcctctgcacccacctcatgcg 151163
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>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full
           insert sequence
          Length = 1208

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 299 ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           |||||||| ||||||||||||||||||||||||| | || ||||||||||| | ||||||
Sbjct: 948 ccgcttggcgtcagtgcagtagttgtagatcatgaacttcctctgcacccacctcatgcg 889
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>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full
           insert sequence
          Length = 1208

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 299 ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           |||||||| ||||||||||||||||||||||||| | || ||||||||||| | ||||||
Sbjct: 948 ccgcttggcgtcagtgcagtagttgtagatcatgaacttcctctgcacccacctcatgcg 889
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>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full
           insert sequence
          Length = 634

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 299 ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           |||||||| ||||||||||||||||||||||||| | || ||||||||||| | ||||||
Sbjct: 374 ccgcttggcgtcagtgcagtagttgtagatcatgaacttcctctgcacccacctcatgcg 315
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>gb|AY106776.1| Zea mays PCO076978 mRNA sequence
          Length = 974

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 299 ccgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           |||||||| ||| ||||||||||||||||||||| | || ||||||||||| ||||||||
Sbjct: 942 ccgcttggcgtcggtgcagtagttgtagatcatgaacttcctctgcacccagcgcatgcg 883
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>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                             
Query: 312  gtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcgct 360
            ||||||||||||||||||||||  |||| ||||||||| ||||||||||
Sbjct: 1061 gtgcagtagttgtagatcatgtggttgcgctgcacccagcgcatgcgct 1013
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>gb|AY103891.1| Zea mays PCO065722 mRNA sequence
          Length = 1280

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 300 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcacccaacgcatgcg 358
           ||||||| ||| | ||||||||||||||||||| | |||| ||||||||| ||||||||
Sbjct: 967 cgcttggcgtcggcgcagtagttgtagatcatgaacttgcgctgcacccagcgcatgcg 909
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>gb|AY476737.1| Gossypium hirsutum XET mRNA, partial sequence
          Length = 765

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 300 cgcttggggtcagtgcagtagttgtagatcatgtaatt 337
           ||||||| |||||||||||| ||||| |||||||||||
Sbjct: 519 cgcttggtgtcagtgcagtaattgtaaatcatgtaatt 482
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>gb|DQ100340.1| Eucalyptus globulus putative xyloglucan
           endotransglycosylase/hydrolase (XTH4) mRNA, partial cds
          Length = 608

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 300 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcaccca 349
           ||||||| ||| | |||||||||||| |||||||||||  ||||||||||
Sbjct: 397 cgcttggtgtcggcgcagtagttgtatatcatgtaattcttctgcaccca 348
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>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2)
           mRNA, complete cds
          Length = 1375

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 308 gtcagtgcagtagttgtagatcatgtaattgctctgcaccca 349
           ||||| ||| ||||||||||||||||||||  ||||||||||
Sbjct: 866 gtcagcgcaatagttgtagatcatgtaattcttctgcaccca 825
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>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete
           cds
          Length = 1221

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 308 gtcagtgcagtagttgtagatcatgtaattgctctgcaccca 349
           ||||| |||||| |||||||||||||||||  ||||||||||
Sbjct: 913 gtcagagcagtaattgtagatcatgtaattcttctgcaccca 872
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>emb|AJ555155.1|CSA555155 Cucumis sativus XTH3 gene for putative xyloglucan
            endotransglycosylase, exons 1-3, clone 4
          Length = 3074

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 308  gtcagtgcagtagttgtagatcatgta 334
            |||||||||||| ||||||||||||||
Sbjct: 2636 gtcagtgcagtaattgtagatcatgta 2610
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>emb|AJ555126.1|CSA555126 Cucumis sativus mRNA for putative xyloglucan endotransglycosylase
           (xth3 gene)
          Length = 1038

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 308 gtcagtgcagtagttgtagatcatgta 334
           |||||||||||| ||||||||||||||
Sbjct: 846 gtcagtgcagtaattgtagatcatgta 820
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>gb|AY105365.1| Zea mays PCO092487 mRNA sequence
          Length = 1253

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 312 gtgcagtagttgtagatcatgta 334
           |||||||||||||||||||||||
Sbjct: 898 gtgcagtagttgtagatcatgta 876
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>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete
           cds
          Length = 1827

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 312 gtgcagtagttgtagatcatgta 334
           |||||||||||||||||||||||
Sbjct: 913 gtgcagtagttgtagatcatgta 891
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>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete
           cds
          Length = 1221

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 312 gtgcagtagttgtagatcatgta 334
           |||||||||||||||||||||||
Sbjct: 905 gtgcagtagttgtagatcatgta 883
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>ref|XM_473787.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 882

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 313 tgcagtagttgtagatcatgta 334
           ||||||||||||||||||||||
Sbjct: 829 tgcagtagttgtagatcatgta 808
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>gb|AY365421.1| Sesamum indicum xyloglucan endotransglycosylase mRNA, partial cds
          Length = 494

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 312 gtgcagtagttgtagatcatgt 333
           ||||||||||||||||||||||
Sbjct: 491 gtgcagtagttgtagatcatgt 470
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>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA,
           complete cds
          Length = 1268

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 307 ggtcagtgcagtagttgtagat 328
           ||||||||||||||||||||||
Sbjct: 889 ggtcagtgcagtagttgtagat 868
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>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02,
              complete sequence
          Length = 166804

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 313    tgcagtagttgtagatcatgta 334
              ||||||||||||||||||||||
Sbjct: 141164 tgcagtagttgtagatcatgta 141185
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>emb|AJ130885.1|FSY130885 Fagus sylvatica mRNA for xyloglucan endotransglycosylase 1
          Length = 1223

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 300 cgcttggggtcagtgcagtagttgtagatcatgtaattgctctgcaccca 349
           ||||||| ||| ||||| ||||| || |||||||||||  ||||||||||
Sbjct: 873 cgcttggtgtctgtgcaatagttataaatcatgtaatttttctgcaccca 824
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 313      tgcagtagttgtagatcatgta 334
                ||||||||||||||||||||||
Sbjct: 30507787 tgcagtagttgtagatcatgta 30507808
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>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full
           insert sequence
          Length = 1041

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 313 tgcagtagttgtagatcatgta 334
           ||||||||||||||||||||||
Sbjct: 892 tgcagtagttgtagatcatgta 871
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>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor
           (XTH1) mRNA, complete cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 308 gtcagtgcagtagttgtagat 328
           |||||||||||||||||||||
Sbjct: 813 gtcagtgcagtagttgtagat 793
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>emb|AL157366.12| Human DNA sequence from clone RP11-467D10 on chromosome 13 Contains
             part of the ATP8A2 gene for ATPase, aminophospholipid
             transporter-like, Class I, type 8A, member 2 (ML-1 protein
             (IB, ATP, ML-1, ATPIB, DKFZP434B1913)) and a novel
             pseudogene, complete sequence
          Length = 37433

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 117   catttcccatcactaatcctt 137
             |||||||||||||||||||||
Sbjct: 14141 catttcccatcactaatcctt 14121
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>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1712

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 308  gtcagtgcagtagttgtagat 328
            |||||||||||||||||||||
Sbjct: 1450 gtcagtgcagtagttgtagat 1430
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>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA,
           complete cds
          Length = 1130

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 308 gtcagtgcagtagttgtagat 328
           |||||||||||||||||||||
Sbjct: 872 gtcagtgcagtagttgtagat 852
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>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds
          Length = 975

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 308 gtcagtgcagtagttgtagat 328
           |||||||||||||||||||||
Sbjct: 833 gtcagtgcagtagttgtagat 813
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>ref|XM_468468.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 298 cccgcttggggtcagtgcagtagttgtagatcatgt 333
           |||||||||||||   |||||||||||||| |||||
Sbjct: 898 cccgcttggggtcgtagcagtagttgtagaccatgt 863
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>ref|XM_502003.1| Yarrowia lipolytica CLIB122, YALI0C19217g predicted mRNA
          Length = 1029

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 ggcaaaaacgcccttggcga 297
           ||||||||||||||||||||
Sbjct: 682 ggcaaaaacgcccttggcga 701
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>gb|AC035143.5| Homo sapiens chromosome 5 clone CTD-2069C21, complete sequence
          Length = 108276

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 164  ccccatttttcctatctcaa 183
            ||||||||||||||||||||
Sbjct: 5182 ccccatttttcctatctcaa 5163
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>gb|AC148685.1| Macaca mulatta Major Histocompatibility Complex BAC MMU188J04, complete
             sequence
          Length = 166821

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   gggactacatggagcactcg 278
             ||||||||||||||||||||
Sbjct: 22059 gggactacatggagcactcg 22040
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 298      cccgcttggggtcagtgcagtagttgtagatcatgt 333
                |||||||||||||   |||||||||||||| |||||
Sbjct: 35395314 cccgcttggggtcgtagcagtagttgtagaccatgt 35395349
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>gb|AC008854.3|AC008854 Homo sapiens chromosome 5 clone CTD-2177J2, complete sequence
          Length = 129538

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   ccccatttttcctatctcaa 183
             ||||||||||||||||||||
Sbjct: 88010 ccccatttttcctatctcaa 87991
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>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1063_D06
          Length = 102439

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 298  cccgcttggggtcagtgcagtagttgtagatcatgt 333
            |||||||||||||   |||||||||||||| |||||
Sbjct: 6835 cccgcttggggtcgtagcagtagttgtagaccatgt 6870
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>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C04
          Length = 103194

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 298   cccgcttggggtcagtgcagtagttgtagatcatgt 333
             |||||||||||||   |||||||||||||| |||||
Sbjct: 55862 cccgcttggggtcgtagcagtagttgtagaccatgt 55897
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>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1913

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  tcagtgcagtagttgtagat 328
            ||||||||||||||||||||
Sbjct: 1610 tcagtgcagtagttgtagat 1591
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      gaacagaaaaatccaccacc 103
               ||||||||||||||||||||
Sbjct: 2534110 gaacagaaaaatccaccacc 2534129
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>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase
           precursor (XET) mRNA, complete cds
          Length = 1178

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 tcagtgcagtagttgtagat 328
           ||||||||||||||||||||
Sbjct: 858 tcagtgcagtagttgtagat 839
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 278     ggcaaaaacgcccttggcga 297
               ||||||||||||||||||||
Sbjct: 2626944 ggcaaaaacgcccttggcga 2626925
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>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds
          Length = 1319

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 tcagtgcagtagttgtagat 328
           ||||||||||||||||||||
Sbjct: 999 tcagtgcagtagttgtagat 980


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,734,598
Number of Sequences: 3902068
Number of extensions: 2734598
Number of successful extensions: 42846
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42731
Number of HSP's gapped (non-prelim): 110
length of query: 362
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 340
effective length of database: 17,147,199,772
effective search space: 5830047922480
effective search space used: 5830047922480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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