ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet114g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 133 4e-28
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
3dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 4e-28
4dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 1e-21
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
6dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
7dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic D... 70 5e-09
8ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 50 0.004
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
10dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
11dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
12gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, comp... 44 0.27
13gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, comp... 44 0.27
14ref|NM_001031296.1| Gallus gallus splicing factor, arginine/seri... 42 1.1
15emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clo... 42 1.1
16emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22 42 1.1
17ref|XM_464952.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.2
18gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, co... 40 4.2
19gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, comple... 40 4.2
20gb|DQ485150.1| Burkholderia cepacia MPS gene, partial sequence 40 4.2
21emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in... 40 4.2
22gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, co... 40 4.2
23emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 40 4.2
24dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
25dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor... 40 4.2
26gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoieti... 40 4.2
27dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
28dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
29gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q... 40 4.2
30gb|AF185273.1|AF185273 Burkholderia cepacia unknown sequence 40 4.2
31gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, co... 40 4.2
32gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosom... 40 4.2
33emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on ch... 40 4.2
34emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on ch... 40 4.2 
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score =  133 bits (67), Expect = 4e-28
 Identities = 138/162 (85%)
 Strand = Plus / Minus

                                                                         
Query: 161   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
             ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 89775 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 89716

                                                                         
Query: 221   gcccgctgcaaatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
             |  | |  ||  || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 89715 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 89656

                                                       
Query: 281   gacgtccgcggggccgngccgccgtccaccacgccgaggcag 322
             |||||   ||  |||  ||||||||||||||| |||||||||
Sbjct: 89655 gacgtttccgacgccacgccgccgtccaccacaccgaggcag 89614



 Score =  115 bits (58), Expect = 9e-23
 Identities = 106/122 (86%)
 Strand = Plus / Minus

                                                                         
Query: 161   aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
             ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 92274 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 92215

                                                                         
Query: 221   gcccgctgcaaatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
             | || || ||  || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 92214 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 92155

               
Query: 281   ga 282
             ||
Sbjct: 92154 ga 92153



 Score =  111 bits (56), Expect = 1e-21
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                          
Query: 236    aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 295
              |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 103640 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 103581

                                         
Query: 296    gngccgccgtccaccacgccgaggcag 322
              | |||| ||||||||||||||||||||
Sbjct: 103580 gtgccggcgtccaccacgccgaggcag 103554



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 135/165 (81%)
 Strand = Plus / Minus

                                                                         
Query: 158   ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 217
             |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 96657 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 96598

                                                                         
Query: 218   ctcgcccgctgcaaatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 277
             |  | || || ||  ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 96597 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 96538

                                                          
Query: 278   accgacgtccgcggggccgngccgccgtccaccacgccgaggcag 322
             |||||||||  ||||||   ||| || ||||| ||||||| ||||
Sbjct: 96537 accgacgtctccggggctacgcctccatccacaacgccgaagcag 96493
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  133 bits (67), Expect = 4e-28
 Identities = 138/162 (85%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
                ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 19489063 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 19489004

                                                                            
Query: 221      gcccgctgcaaatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
                |  | |  ||  || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 19489003 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 19488944

                                                          
Query: 281      gacgtccgcggggccgngccgccgtccaccacgccgaggcag 322
                |||||   ||  |||  ||||||||||||||| |||||||||
Sbjct: 19488943 gacgtttccgacgccacgccgccgtccaccacaccgaggcag 19488902



 Score =  115 bits (58), Expect = 9e-23
 Identities = 106/122 (86%)
 Strand = Plus / Minus

                                                                            
Query: 161      aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
                ||||| ||||||||||||||||||||||| ||| | ||| |||||||||| || |||| |
Sbjct: 19491562 aggcgaaagttgttgcaggtcgtctgccgcaacgggaggtaggagctgaaacccagccgc 19491503

                                                                            
Query: 221      gcccgctgcaaatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
                | || || ||  || |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 19491502 gacccctccaggtcaaactccagcaggttgtcctccatcatgtgcccgccgatcaccacc 19491443

                  
Query: 281      ga 282
                ||
Sbjct: 19491442 ga 19491441



 Score =  111 bits (56), Expect = 1e-21
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                            
Query: 236      aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 295
                |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 19502928 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 19502869

                                           
Query: 296      gngccgccgtccaccacgccgaggcag 322
                | |||| ||||||||||||||||||||
Sbjct: 19502868 gtgccggcgtccaccacgccgaggcag 19502842



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 135/165 (81%)
 Strand = Plus / Minus

                                                                            
Query: 158      ccaaggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagc 217
                |||||| | ||| ||||||||||||||||| | ||| | ||| ||||| |||| || |||
Sbjct: 19495945 ccaaggtgaaagctgttgcaggtcgtctgcagcaacgggaggtaggaggtgaaacccagc 19495886

                                                                            
Query: 218      ctcgcccgctgcaaatcgaactccagcaggttgtcctccatcgtgtgccccccgatcacc 277
                |  | || || ||  ||||||||||||||||||||||||||| |||| || |||||||||
Sbjct: 19495885 cgtgacccctccaggtcgaactccagcaggttgtcctccatcatgtgtccgccgatcacc 19495826

                                                             
Query: 278      accgacgtccgcggggccgngccgccgtccaccacgccgaggcag 322
                |||||||||  ||||||   ||| || ||||| ||||||| ||||
Sbjct: 19495825 accgacgtctccggggctacgcctccatccacaacgccgaagcag 19495781
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>dbj|AK070554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A08, full
            insert sequence
          Length = 1474

 Score =  133 bits (67), Expect = 4e-28
 Identities = 138/162 (85%)
 Strand = Plus / Minus

                                                                        
Query: 161  aggcggaagttgttgcaggtcgtctgccggaacagcagggaggagctgaacccgagcctc 220
            ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |
Sbjct: 1343 aggcgaaagttgttgcaggtcgtttgccggaacaggagggaggagctgaaccccagccgc 1284

                                                                        
Query: 221  gcccgctgcaaatcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccacc 280
            |  | |  ||  || |||||||||||||||||||||||| |||| || ||||||||||||
Sbjct: 1283 gatcccaccaggtcaaactccagcaggttgtcctccatcatgtgaccgccgatcaccacc 1224

                                                      
Query: 281  gacgtccgcggggccgngccgccgtccaccacgccgaggcag 322
            |||||   ||  |||  ||||||||||||||| |||||||||
Sbjct: 1223 gacgtttccgacgccacgccgccgtccaccacaccgaggcag 1182
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>dbj|AK122177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148M15, full
            insert sequence
          Length = 1741

 Score =  111 bits (56), Expect = 1e-21
 Identities = 79/87 (90%)
 Strand = Plus / Minus

                                                                        
Query: 236  aactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggggcc 295
            |||||||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||
Sbjct: 1519 aactccagcaggttgtcctccatcatgtgcccaccgatcacaaccgacgtctgcggctcc 1460

                                       
Query: 296  gngccgccgtccaccacgccgaggcag 322
            | |||| ||||||||||||||||||||
Sbjct: 1459 gtgccggcgtccaccacgccgaggcag 1433
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                            
Query: 233      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 292
                |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 15506035 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 15505976

                                              
Query: 293      gccgngccgccgtccaccacgccgaggcag 322
                ||||  ||||||||||||||| ||||||||
Sbjct: 15505975 gccgctccgccgtccaccacggcgaggcag 15505946
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>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0689B09
          Length = 144932

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                         
Query: 233   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 292
             |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 26890 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 26831

                                           
Query: 293   gccgngccgccgtccaccacgccgaggcag 322
             ||||  ||||||||||||||| ||||||||
Sbjct: 26830 gccgctccgccgtccaccacggcgaggcag 26801
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>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                          
Query: 233    tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccgacgtccgcggg 292
              |||||| |||||||| | ||||||||| |||| || ||||||||||||| || |  ||| 
Sbjct: 155327 tcgaacaccagcaggatctcctccatcatgtggccgccgatcaccaccggcgcctccggc 155268

                                            
Query: 293    gccgngccgccgtccaccacgccgaggcag 322
              ||||  ||||||||||||||| ||||||||
Sbjct: 155267 gccgctccgccgtccaccacggcgaggcag 155238
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>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 233  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1181 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1133
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                 
Query: 233      tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
                |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 41126162 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 41126210
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 233   tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
             |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 23217 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 23265
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>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
            insert sequence
          Length = 1405

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                             
Query: 233  tcgaactccagcaggttgtcctccatcgtgtgccccccgatcaccaccg 281
            |||||| ||| |||||||| |||||||  |||||| |||||||||||||
Sbjct: 1102 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccg 1054
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>gb|AC012049.8| Homo sapiens chromosome 10 clone RP11-76F22, complete sequence
          Length = 142656

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 25     gttgattattcaaacagccaaa 46
              ||||||||||||||||||||||
Sbjct: 119629 gttgattattcaaacagccaaa 119650
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>gb|AC022537.8| Homo sapiens chromosome 10 clone RP11-40C11, complete sequence
          Length = 154939

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 25    gttgattattcaaacagccaaa 46
             ||||||||||||||||||||||
Sbjct: 70617 gttgattattcaaacagccaaa 70638
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>ref|NM_001031296.1| Gallus gallus splicing factor, arginine/serine-rich 11 (SFRS11), mRNA
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>emb|AJ720592.1| Gallus gallus mRNA for hypothetical protein, clone 20o8
          Length = 2625

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 40   agccaaaacaaaacccagggggaaa 64
            ||||||||||||||||| |||||||
Sbjct: 2034 agccaaaacaaaacccacggggaaa 2010
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>emb|CR389009.1| Gallus gallus finished cDNA, clone ChEST177c22
          Length = 759

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 40  agccaaaacaaaacccagggggaaa 64
           ||||||||||||||||| |||||||
Sbjct: 194 agccaaaacaaaacccacggggaaa 170
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>ref|XM_464952.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3558

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   acaaattttgactgcaatct 91
            ||||||||||||||||||||
Sbjct: 1744 acaaattttgactgcaatct 1763
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>gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, complete sequence
          Length = 121683

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 121155 aaacacacaaacaaattttg 121136



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 116267 aaacacacaaacaaattttg 116248



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 113475 aaacacacaaacaaattttg 113456



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 108605 aaacacacaaacaaattttg 108586



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     aaacacacaaacaaattttg 81
              ||||||||||||||||||||
Sbjct: 104518 aaacacacaaacaaattttg 104499
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>gb|AC132461.3| Mus musculus chromosome 5 clone RP23-33C9, complete sequence
          Length = 196803

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    gcaagcacacatatcatctt 118
             ||||||||||||||||||||
Sbjct: 56902 gcaagcacacatatcatctt 56921
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>gb|DQ485150.1| Burkholderia cepacia MPS gene, partial sequence
          Length = 1811

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 274  caccaccgacgtccgcggggccgngcc 300
            ||||||||||||||||||| ||| |||
Sbjct: 1638 caccaccgacgtccgcgggtccgcgcc 1664
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>emb|CT009746.6| Zebrafish DNA sequence from clone CH73-236M19 in linkage group 18,
             complete sequence
          Length = 30929

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    gggggaaacacacaaacaaa 76
             ||||||||||||||||||||
Sbjct: 14594 gggggaaacacacaaacaaa 14613
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>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence
          Length = 209936

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 156    acccaaggcggaagttgttgcagg 179
              ||||||||| ||||||||||||||
Sbjct: 191105 acccaaggctgaagttgttgcagg 191128
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>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   cagggaggagctgaacccga 215
             ||||||||||||||||||||
Sbjct: 38983 cagggaggagctgaacccga 38964
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 29       attattcaaacagccaaaacaaaaccca 56
                ||||| ||||||||||||| ||||||||
Sbjct: 23775776 attatccaaacagccaaaaaaaaaccca 23775803



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       acaaattttgactgcaatct 91
                ||||||||||||||||||||
Sbjct: 10505544 acaaattttgactgcaatct 10505563
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>dbj|D90334.2| Homo sapiens HGF gene for hepatocyte growth factor, complete cds
          Length = 11451

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 10145 attattcaaacagccaaaccaaaa 10122
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>gb|AY246560.1| Homo sapiens hepatocyte growth factor (hepapoietin A; scatter factor)
             (HGF) gene, complete cds
          Length = 73491

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 71267 attattcaaacagccaaaccaaaa 71244
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>dbj|AP005694.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0063E14
          Length = 174415

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    acaaattttgactgcaatct 91
             ||||||||||||||||||||
Sbjct: 86712 acaaattttgactgcaatct 86731
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>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 29    attattcaaacagccaaaacaaaaccca 56
             ||||| ||||||||||||| ||||||||
Sbjct: 86360 attatccaaacagccaaaaaaaaaccca 86387
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>gb|AC004960.1|AC004960 Homo sapiens PAC clone RP5-1098B1 from 7q11.23-q21, complete sequence
          Length = 143834

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    attattcaaacagccaaaacaaaa 52
             |||||||||||||||||| |||||
Sbjct: 47574 attattcaaacagccaaaccaaaa 47597
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>gb|AF185273.1|AF185273 Burkholderia cepacia unknown sequence
          Length = 2351

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 274  caccaccgacgtccgcggggccgngcc 300
            ||||||||||||||||||| ||| |||
Sbjct: 1758 caccaccgacgtccgcgggtccgcgcc 1784
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>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence
          Length = 248750

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   acccaaggcggaagttgttgcagg 179
             ||||||||| ||||||||||||||
Sbjct: 12934 acccaaggctgaagttgttgcagg 12957
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>gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosome 10, complete
             sequence
          Length = 105368

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 33049 aaacacacaaacaaattttg 33068



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 28962 aaacacacaaacaaattttg 28981



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 24092 aaacacacaaacaaattttg 24111



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 21300 aaacacacaaacaaattttg 21319



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aaacacacaaacaaattttg 81
             ||||||||||||||||||||
Sbjct: 16412 aaacacacaaacaaattttg 16431
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>emb|AL808021.12| Mouse DNA sequence from clone RP23-349B15 on chromosome 11, complete
             sequence
          Length = 149561

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   actccagcaggttgtcctcc 256
             ||||||||||||||||||||
Sbjct: 28862 actccagcaggttgtcctcc 28881
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>emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on chromosome 4, complete
             sequence
          Length = 211585

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    tcaaacagccaaaacaaaac 53
             ||||||||||||||||||||
Sbjct: 19090 tcaaacagccaaaacaaaac 19071


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,684,517
Number of Sequences: 3902068
Number of extensions: 3684517
Number of successful extensions: 69248
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69063
Number of HSP's gapped (non-prelim): 180
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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