>emb|AJ234414.1|HVU234414 Hordeum vulgare partial mRNA; clone cMWG0676.uni
          Length = 348

 Score =  192 bits (97), Expect = 1e-46
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagaggaactggacgatgcacacgcctgcctactcctccttggggatccaccggctcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 acagaggaactggacgatgcacacgcctgcctactcctccttggggatccaccggctcca 171

                                                
Query: 61  ccagatgctcttccgctggctggtgagctcgtccatg 97
           |||||||||||||||||||||||||||||||||||||
Sbjct: 172 ccagatgctcttccgctggctggtgagctcgtccatg 208

>gb|AC130725.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0494H05,
             complete sequence
          Length = 141715

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 27    ctgcctactcctccttggggatccaccggctccaccagatgctcttccgctggctggtga 86
             |||||||||||||||| || ||||||||||||||||| ||||| || | ||||||| | |
Sbjct: 30591 ctgcctactcctcctttggtatccaccggctccaccaaatgcttttgctctggctgctaa 30650

                        
Query: 87    gctcgtccatg 97
             |||| ||||||
Sbjct: 30651 gctcatccatg 30661

>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
             complete sequence
          Length = 166218

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 27    ctgcctactcctccttggggatccaccggctccaccagatgctcttccgctggctggtga 86
             |||||||||||||||| || ||||||||||||||||| ||||| || | ||||||| | |
Sbjct: 56432 ctgcctactcctcctttggtatccaccggctccaccaaatgcttttgctctggctgctaa 56491

                        
Query: 87    gctcgtccatg 97
             |||| ||||||
Sbjct: 56492 gctcatccatg 56502

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                            
Query: 27       ctgcctactcctccttggggatccaccggctccaccagatgctcttccgctggctggtga 86
                |||||||||||||||| || ||||||||||||||||| ||||| || | ||||||| | |
Sbjct: 27024009 ctgcctactcctcctttggtatccaccggctccaccaaatgcttttgctctggctgctaa 27024068

                           
Query: 87       gctcgtccatg 97
                |||| ||||||
Sbjct: 27024069 gctcatccatg 27024079

>dbj|AK099842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J17, full
            insert sequence
          Length = 2527

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 27   ctgcctactcctccttggggatccaccggctccaccagatgctcttccgctggctggtga 86
            |||||||||||||||| || ||||||||||||||||| ||||| || | ||||||| | |
Sbjct: 2068 ctgcctactcctcctttggtatccaccggctccaccaaatgcttttgctctggctgctaa 2009

                       
Query: 87   gctcgtccatg 97
            |||| ||||||
Sbjct: 2008 gctcatccatg 1998

>dbj|AK072422.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089B02, full
            insert sequence
          Length = 1940

 Score = 69.9 bits (35), Expect = 1e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 27   ctgcctactcctccttggggatccaccggctccaccagatgctcttccgctggctggtga 86
            |||||||||||||||| || ||||||||||||||||| ||||| || | ||||||| | |
Sbjct: 1714 ctgcctactcctcctttggtatccaccggctccaccaaatgcttttgctctggctgctaa 1655

                       
Query: 87   gctcgtccatg 97
            |||| ||||||
Sbjct: 1654 gctcatccatg 1644

>ref|XM_475843.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1680

 Score = 61.9 bits (31), Expect = 3e-07
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 31   ctactcctccttggggatccaccggctccaccagatgctcttccgctggctggtgagctc 90
            |||||||||||| || ||||||||||||||||| ||||| || | ||||||| | |||||
Sbjct: 1680 ctactcctcctttggtatccaccggctccaccaaatgcttttgctctggctgctaagctc 1621

                   
Query: 91   gtccatg 97
             ||||||
Sbjct: 1620 atccatg 1614

>ref|NM_012316.3| Homo sapiens karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA
          Length = 3984

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1742 tgctcttccgctggctggtg 1723

>emb|AL049795.21|HSDJ622L5 Human DNA sequence from clone RP4-622L5 on chromosome 1p34.2-36.11
             Contains the 3' end of the KPNA6 gene for karyopherin
             alpha 6 (importin alpha 7), a novel gene (DKFZp451J0118),
             a novel gene (MGC1203) a novel gene, a novel gene
             (FLJ10547), a novel gene, a novel gene, the 5' end of the
             EIF3S2 gene for eukaryotic translation initiation factor 3
             subunit 2 beta 36kDa and 3 CpG islands, complete sequence
          Length = 115756

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tgctcttccgctggctggtg 85
             ||||||||||||||||||||
Sbjct: 60278 tgctcttccgctggctggtg 60259

>emb|CR858533.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0723 (from clone DKFZp469C0723)
          Length = 3763

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1724 tgctcttccgctggctggtg 1705

>dbj|AK128609.1| Homo sapiens cDNA FLJ46768 fis, clone TRACH3025316, highly  similar
            to Importin alpha-6 subunit
          Length = 3937

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1718 tgctcttccgctggctggtg 1699

>emb|CR592029.1| full-length cDNA clone CS0DI066YM05 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1818

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1388 tgctcttccgctggctggtg 1369

>dbj|AK002111.1| Homo sapiens cDNA FLJ11249 fis, clone PLACE1008790, highly similar to
            Homo sapiens importin alpha 7 subunit mRNA
          Length = 2206

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1742 tgctcttccgctggctggtg 1723

>dbj|AB169013.1| Macaca fascicularis testis cDNA, clone: QtsA-16573, similar to human
            karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA,
            RefSeq: NM_012316.3
          Length = 2228

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1737 tgctcttccgctggctggtg 1718

>dbj|AB168542.1| Macaca fascicularis testis cDNA clone: QtsA-12891, similar to human
            karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA,
            RefSeq: NM_012316.3
          Length = 2044

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1646 tgctcttccgctggctggtg 1627

>gb|BC020520.1| Homo sapiens karyopherin alpha 6 (importin alpha 7), mRNA (cDNA clone
            MGC:17918 IMAGE:3913864), complete cds
          Length = 3967

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 66   tgctcttccgctggctggtg 85
            ||||||||||||||||||||
Sbjct: 1730 tgctcttccgctggctggtg 1711

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 69      tcttccgctggctggtgagc 88
               ||||||||||||||||||||
Sbjct: 1804559 tcttccgctggctggtgagc 1804578

>ref|XM_510658.1| PREDICTED: Pan troglodytes similar to neogenin (LOC453728), mRNA
          Length = 1027

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 47  atccaccggctccaccaga 65
           |||||||||||||||||||
Sbjct: 279 atccaccggctccaccaga 261

>emb|BX026044.1|CNS08S9C Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA4AF08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 939

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 45  ggatccaccggctccacca 63
           |||||||||||||||||||
Sbjct: 126 ggatccaccggctccacca 144

>gb|AC129980.6| Homo sapiens chromosome 15, clone CTD-2529M12, complete sequence
          Length = 236391

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    atccaccggctccaccaga 65
             |||||||||||||||||||
Sbjct: 40163 atccaccggctccaccaga 40181

>gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, complete sequence
          Length = 178756

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 47    atccaccggctccaccaga 65
             |||||||||||||||||||
Sbjct: 46800 atccaccggctccaccaga 46782

>ref|NM_002499.1| Homo sapiens neogenin homolog 1 (chicken) (NEO1), mRNA
          Length = 5297

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 47  atccaccggctccaccaga 65
           |||||||||||||||||||
Sbjct: 319 atccaccggctccaccaga 301

>gb|AC067936.1|AC067936 Neurospora crassa chromosome 7, clone X3-B5, complete sequence
          Length = 37676

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 50    caccggctccaccagatgctcttccgc 76
             ||||||||||| | |||||||||||||
Sbjct: 25105 caccggctccatcggatgctcttccgc 25079

>gb|U72391.1|HSU72391 Human neogenin mRNA, complete cds
          Length = 4631

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 47  atccaccggctccaccaga 65
           |||||||||||||||||||
Sbjct: 309 atccaccggctccaccaga 291

>gb|U61262.1|HSU61262 Human neogenin mRNA, complete cds
          Length = 5297

 Score = 38.2 bits (19), Expect = 4.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 47  atccaccggctccaccaga 65
           |||||||||||||||||||
Sbjct: 319 atccaccggctccaccaga 301


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 632,607
Number of Sequences: 3902068
Number of extensions: 632607
Number of successful extensions: 44260
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44177
Number of HSP's gapped (non-prelim): 83
length of query: 97
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 76
effective length of database: 17,151,101,840
effective search space: 1303483739840
effective search space used: 1303483739840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)