>STK36_PONPY (Q5RAJ5) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused|
            homolog)
          Length = 1315

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +1

Query: 58   RETETHRYVIQQKLICSRKRHTPIHLPLSTLESFRITDPSTL----APAGLATRTKQSQL 225
            R++E   +++Q  + C     T + LP+S L    +TDP++L         + RT  S L
Sbjct: 1009 RDSEVAAHLLQ--VCCYHLPLTQVELPISLLTRLALTDPTSLNQFVNTVAASPRTIISFL 1066

Query: 226  TTLQESESKLRSSHSPGYITWTSRGVEPS 312
            +    S+  L +S     +  T+R + PS
Sbjct: 1067 SVALLSDQPLLTSDLLSLLAHTARVLSPS 1095

>T7L1A_XENLA (P70062) Transcription factor 7-like 1-A (HMG box transcription|
           factor 3-A) (TCF-3-A) (xTcf-3)
          Length = 554

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
 Frame = +1

Query: 61  ETETH---RYVIQQKLICSRKRHTPIHLPLSTLESFRITDPSTLAPAG-LATRTKQSQ-- 222
           E ETH   + +  Q L   +   +P     S L+S      +  +PA   AT ++Q+Q  
Sbjct: 411 EMETHTKTKKMCVQHLPADKSCDSPASSHGSMLDSPATPSAALASPAAPAATHSEQAQPL 470

Query: 223 -LTTLQESESKLRSSHSPGYITWTSRGVEPSPGYIHMARG*FVSGTSIPLPCS 378
            LTT  E+ ++L  SHS  ++   S       G++    G  +    IPL  S
Sbjct: 471 SLTTKPEARAQLSLSHSAAFLASKSPSSSSFSGHLSSPVGSPLLSRPIPLTSS 523

>SYFA_PROMA (Q7VAV9) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase alpha chain) (PheRS)
          Length = 335

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +2

Query: 269 PLVTLHGHRVE*SHPLVTSTWHVVNLF 349
           P+ T  GHR    HPL+T+T H+V+LF
Sbjct: 108 PIGTPFGHR----HPLLTTTEHIVDLF 130

>YNH9_SCHPO (Q96WW0) Hypothetical WD-repeat protein C32H8.09 in chromosome II|
          Length = 483

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 69  DPQICDTTKADMFT*ETYSDTPTTKYPRVL 158
           +P  C  +K      ETY+ T T+KYP VL
Sbjct: 315 EPSFCSASKIRFNCDETYAATITSKYPNVL 344

>C82A1_PEA (Q43068) Cytochrome P450 82A1 (EC 1.14.-.-) (CYPLXXXII) (Fragment)|
          Length = 544

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = +2

Query: 314 LVTSTWHVVNLFQVHRFLFRAPPHSIYSRGTMANFPPYISGSWP 445
           L T+T   ++L  +  FLFR      +S+ +    PP ISGSWP
Sbjct: 6   LNTTTIAFISLISLLFFLFR------FSKVSHTKEPPIISGSWP 43

>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)|
          Length = 2842

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
 Frame = +1

Query: 193  GLATRTKQSQLTTLQESESKLRSSHSPGYITWTSRGVEPSPGYIHMARG*FVSGTSIPLP 372
            G++T  K SQL       +    S   G +++TS G + S   +    G   + +SIP  
Sbjct: 2335 GISTPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQLSQQNLSKQTGLSKNASSIPRS 2394

Query: 373  CSSS--LDLLEGNNGQLPAVHLRELA 444
             S+S  L+ +  +NG    V L  ++
Sbjct: 2395 ESASKGLNQMNNSNGSNKKVELSRMS 2420

>ABF2_BACSU (P94552) Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) (Arabinosidase|
           2)
          Length = 495

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +2

Query: 227 QRCKRVRASCARLTPLVTLHGHRVE*SHPLVTSTWHVVNLFQVHR 361
           Q C+RV+ +    T  V       E    L+T T+HV N+F+VH+
Sbjct: 332 QHCRRVQMANIAQTVNVLQAMILTEGERMLLTPTYHVFNMFKVHQ 376

>APC_HUMAN (P25054) Adenomatous polyposis coli protein (Protein APC)|
          Length = 2843

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 21/73 (28%), Positives = 33/73 (45%)
 Frame = +1

Query: 193  GLATRTKQSQLTTLQESESKLRSSHSPGYITWTSRGVEPSPGYIHMARG*FVSGTSIPLP 372
            G++   K SQL       +    S   G +++TS G + S   +    G   + +SIP  
Sbjct: 2335 GISPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNASSIPRS 2394

Query: 373  CSSSLDLLEGNNG 411
             S+S  L + NNG
Sbjct: 2395 ESASKGLNQMNNG 2407

>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +1

Query: 100 ICSRKRHTPIHLPLSTLESFRITDPSTLAPAGLATRTKQSQLTTLQESESKLRSSHSPGY 279
           + S    TP   P STL +  +T+PS+   +  +T T     TTLQES +    S +   
Sbjct: 669 VASSTSSTP-STPSSTLSTSTVTEPSSTRSSD-STTTSAGSTTTLQESTTTSEESTTDSS 726

Query: 280 ITWTS 294
            T  S
Sbjct: 727 TTTIS 731


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,610,773
Number of Sequences: 219361
Number of extensions: 1324463
Number of successful extensions: 3273
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3273
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)