>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  137 bits (69), Expect = 3e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                            
Query: 200      gttctctatatgaccttaatctccttgagccaagccgtgtggagtgggcaaggatctggc 259
                ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 10135121 gttctttatatgaccttaatctccttgagccaagctgtgtggagtgggcatggatccggc 10135062

                                                                            
Query: 260      ttgtcttgggcgagggccttttcagtgagggagtagaaccagccattcctccacttgaac 319
                ||  |||| || || |||||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 10135061 tttccttgtgcaagcgccttttcggtgagagagtaaaaccatccattcctccacttgaac 10135002

                 
Query: 320      t 320
                |
Sbjct: 10135001 t 10135001

>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0023I13
          Length = 165911

 Score =  137 bits (69), Expect = 3e-29
 Identities = 108/121 (89%)
 Strand = Plus / Minus

                                                                         
Query: 200   gttctctatatgaccttaatctccttgagccaagccgtgtggagtgggcaaggatctggc 259
             ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 94467 gttctttatatgaccttaatctccttgagccaagctgtgtggagtgggcatggatccggc 94408

                                                                         
Query: 260   ttgtcttgggcgagggccttttcagtgagggagtagaaccagccattcctccacttgaac 319
             ||  |||| || || |||||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 94407 tttccttgtgcaagcgccttttcggtgagagagtaaaaccatccattcctccacttgaac 94348

              
Query: 320   t 320
             |
Sbjct: 94347 t 94347

>gb|AE008605.1| Rickettsia conorii str. Malish 7, section 37 of 114 of the complete
            genome
          Length = 10093

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 144  aaaaatactattagttgtttt 164
            |||||||||||||||||||||
Sbjct: 2440 aaaaatactattagttgtttt 2460

>gb|BC058293.1| Danio rerio early growth response 2a, mRNA (cDNA clone
            IMAGE:6788718), partial cds
          Length = 1410

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 178  tgtttgtgtgcacacaaaaaa 198
            |||||||||||||||||||||
Sbjct: 1171 tgtttgtgtgcacacaaaaaa 1191

>emb|BX927349.12| Zebrafish DNA sequence from clone DKEY-84K15 in linkage group 17,
              complete sequence
          Length = 159649

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 178    tgtttgtgtgcacacaaaaaa 198
              |||||||||||||||||||||
Sbjct: 139954 tgtttgtgtgcacacaaaaaa 139934

>gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 212568

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    cacacatgtcataaacataca 78
             |||||||||||||||||||||
Sbjct: 97888 cacacatgtcataaacataca 97908

>gb|AY070229.1| Danio rerio zinc finger transcription factor (frb35) mRNA, complete
            cds
          Length = 1877

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 178  tgtttgtgtgcacacaaaaaa 198
            |||||||||||||||||||||
Sbjct: 1667 tgtttgtgtgcacacaaaaaa 1687

>gb|AC098868.3| Homo sapiens BAC clone RP11-545H22 from 4, complete sequence
          Length = 124972

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 177   gtgtttgtgtgcacacaaaaa 197
             |||||||||||||||||||||
Sbjct: 30343 gtgtttgtgtgcacacaaaaa 30363

>ref|XM_695176.1| PREDICTED: Danio rerio similar to Egr2a protein (LOC571573), mRNA
          Length = 1417

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 178  tgtttgtgtgcacacaaaaaa 198
            |||||||||||||||||||||
Sbjct: 1230 tgtttgtgtgcacacaaaaaa 1250

>ref|NM_183341.1| Danio rerio early growth response 2a (egr2a), mRNA
          Length = 1877

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 178  tgtttgtgtgcacacaaaaaa 198
            |||||||||||||||||||||
Sbjct: 1667 tgtttgtgtgcacacaaaaaa 1687

>gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, complete sequence
          Length = 179096

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 58     cacacatgtcataaacataca 78
              |||||||||||||||||||||
Sbjct: 112945 cacacatgtcataaacataca 112925

>gb|AC007864.5| Trypanosoma brucei chromosome 2 clone RPCI93-28H13, complete sequence
          Length = 160498

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ttctccatcgcatcgtgttt 182
              ||||||||||||||||||||
Sbjct: 143802 ttctccatcgcatcgtgttt 143783

>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ttctccatcgcatcgtgttt 182
              ||||||||||||||||||||
Sbjct: 760131 ttctccatcgcatcgtgttt 760112

>gb|AC124662.10| Mus musculus chromosome 9, clone RP24-409K22, complete sequence
          Length = 235471

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gcatcgtgtttgtgtgcaca 191
              ||||||||||||||||||||
Sbjct: 217093 gcatcgtgtttgtgtgcaca 217112

>gb|AC102062.9| Mus musculus chromosome 19, clone RP23-217B9, complete sequence
          Length = 253774

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     cataaacatacaggactcag 86
              ||||||||||||||||||||
Sbjct: 116769 cataaacatacaggactcag 116788

>ref|XM_946534.1| Trypanosoma brucei TREU927 dual specificity protein phosphatase
            (Tb927.2.4280) partial mRNA
          Length = 3129

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ttctccatcgcatcgtgttt 182
            ||||||||||||||||||||
Sbjct: 2931 ttctccatcgcatcgtgttt 2950

>gb|AC124357.3| Mus musculus BAC clone RP24-490K11 from chromosome 19, complete
             sequence
          Length = 154460

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    cataaacatacaggactcag 86
             ||||||||||||||||||||
Sbjct: 90926 cataaacatacaggactcag 90907

>emb|CR392347.5| Zebrafish DNA sequence from clone DKEY-37G12 in linkage group 1, complete
              sequence
          Length = 172461

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     gtcataaacatacaggactc 84
              ||||||||||||||||||||
Sbjct: 150764 gtcataaacatacaggactc 150745

>gb|AC023173.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-11G22, complete
             sequence
          Length = 203451

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   aatactattagttgttttct 166
             ||||||||||||||||||||
Sbjct: 47010 aatactattagttgttttct 46991

>gb|AC025159.28| Homo sapiens 12 BAC RP11-1082K22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 209961

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    tgtaaatcacaaaatagtct 133
              ||||||||||||||||||||
Sbjct: 149305 tgtaaatcacaaaatagtct 149324

>emb|BX547931.10| Zebrafish DNA sequence from clone CH211-256N19 in linkage group 1,
             complete sequence
          Length = 46671

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    gtcataaacatacaggactc 84
             ||||||||||||||||||||
Sbjct: 13165 gtcataaacatacaggactc 13146

>gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181829

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    gtgtttgtgtgcacacaaaa 196
              ||||||||||||||||||||
Sbjct: 111678 gtgtttgtgtgcacacaaaa 111697

>gb|AC024942.18|AC024942 Homo sapiens 12 BAC RP11-1115M13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146120

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    tgtaaatcacaaaatagtct 133
              ||||||||||||||||||||
Sbjct: 130433 tgtaaatcacaaaatagtct 130452

>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19,
              complete sequence
          Length = 168515

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    aaaatactattagttgtttt 164
              ||||||||||||||||||||
Sbjct: 101653 aaaatactattagttgtttt 101672

>gb|AC162937.6| Mus musculus BAC clone RP23-120I8 from chromosome 9, complete sequence
          Length = 207210

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gcatcgtgtttgtgtgcaca 191
             ||||||||||||||||||||
Sbjct: 59483 gcatcgtgtttgtgtgcaca 59502


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,191,060
Number of Sequences: 3902068
Number of extensions: 3191060
Number of successful extensions: 56877
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56805
Number of HSP's gapped (non-prelim): 72
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)