>gb|AY107351.1| Zea mays PCO116928 mRNA sequence
          Length = 598

 Score =  123 bits (62), Expect = 5e-25
 Identities = 134/158 (84%)
 Strand = Plus / Minus

                                                                       
Query: 250 tccatgatgtcatcatcaatctcaattgcgatgatctccccgtcttcaaactgatccttc 309
           |||| |||||| || |||||||| ||||  |||||||||||||| || ||||||||||||
Sbjct: 475 tccaggatgtcctcgtcaatctcgattgaaatgatctccccgtcatcgaactgatccttc 416

                                                                       
Query: 310 cttggaggcgctggaggggcgtaaagccgtgctgggcctgttcccttcttcttgttacgg 369
           |||||||| |||||||| ||  | ||||| || || || ||||||||||||||||| || 
Sbjct: 415 cttggaggagctggaggagcaaagagccgcgcaggcccagttcccttcttcttgttgcgc 356

                                                 
Query: 370 ggccgtgcatttccatatgagtggctgaaccttttgcc 407
           ||||  ||||| |||||||| ||| |||||||||||||
Sbjct: 355 ggcctcgcattgccatatgaatggttgaaccttttgcc 318

>dbj|AK061231.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A09, full
           insert sequence
          Length = 623

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 110/131 (83%)
 Strand = Plus / Minus

                                                                       
Query: 289 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 348
           ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| 
Sbjct: 370 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 311

                                                                       
Query: 349 gttcccttcttcttgttacggggccgtgcatttccatatgagtggctgaaccttttgcct 408
           ||||||||||||||||| || ||||  |||||||| || |||||| |||||||||| || 
Sbjct: 310 gttcccttcttcttgttgcgcggcctcgcatttccgtacgagtggttgaacctttttccc 251

                      
Query: 409 ctctttgtctt 419
           ||||| |||||
Sbjct: 250 ctcttggtctt 240

>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full
            insert sequence
          Length = 1383

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 110/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 289  ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 348
            ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| 
Sbjct: 1090 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 1031

                                                                        
Query: 349  gttcccttcttcttgttacggggccgtgcatttccatatgagtggctgaaccttttgcct 408
            ||||||||||||||||| || ||||  |||||||| || |||||| |||||||||| || 
Sbjct: 1030 gttcccttcttcttgttgcgcggcctcgcatttccgtacgagtggttgaacctttttccc 971

                       
Query: 409  ctctttgtctt 419
            ||||| |||||
Sbjct: 970  ctcttggtctt 960

>dbj|AK060420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-G05, full
           insert sequence
          Length = 723

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                       
Query: 289 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 348
           ||||| || ||||| |||||||| |||||||| || || ||| | |||||||  ||||| 
Sbjct: 380 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgtagggcca 321

                                                                       
Query: 349 gttcccttcttcttgttacggggccgtgcatttccatatgagtggctgaaccttttgcct 408
           ||||||||||||||||| || ||||  |||||||| || |||||| |||||||||| || 
Sbjct: 320 gttcccttcttcttgttgcgcggcctcgcatttccgtacgagtggttgaacctttttccc 261

                      
Query: 409 ctctttgtctt 419
           ||||| |||||
Sbjct: 260 ctcttggtctt 250

>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10,
              complete sequence
          Length = 155106

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                          
Query: 289    ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 348
              ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| 
Sbjct: 135160 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 135219

                               
Query: 349    gttcccttcttcttgtt 365
              |||||||||||||||||
Sbjct: 135220 gttcccttcttcttgtt 135236

>gb|AC093920.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1725_E07,
             complete sequence
          Length = 87244

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                         
Query: 289   ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 348
             ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| 
Sbjct: 35939 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 35998

                              
Query: 349   gttcccttcttcttgtt 365
             |||||||||||||||||
Sbjct: 35999 gttcccttcttcttgtt 36015

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                           
Query: 289     ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 348
               ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| 
Sbjct: 5220657 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 5220716

                                
Query: 349     gttcccttcttcttgtt 365
               |||||||||||||||||
Sbjct: 5220717 gttcccttcttcttgtt 5220733

>dbj|AK058675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-H07, full
           insert sequence
          Length = 629

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 289 ccgtcttcaaactgatccttccttggaggcgctggaggggcgtaaagccgtgctgggcct 348
           ||||| || ||||| |||||||| |||||||| || || ||| | |||||||| ||||| 
Sbjct: 415 ccgtcgtcgaactggtccttcctcggaggcgcaggcggcgcgaacagccgtgcagggcca 356

                            
Query: 349 gttcccttcttcttgtt 365
           |||||||||||||||||
Sbjct: 355 gttcccttcttcttgtt 339

>gb|AC092795.2| Homo sapiens chromosome 3 clone RP11-9J18, complete sequence
          Length = 142517

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 190   ttcataaaggacagggaaatca 211
             ||||||||||||||||||||||
Sbjct: 83005 ttcataaaggacagggaaatca 82984

>gb|AC007574.6|AC007574 Drosophila melanogaster, chromosome 2R, region 60D-60D, BAC clone
             BACR11C07, complete sequence
          Length = 171151

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 306   cttccttggaggcgctggaggg 327
             ||||||||||||||||||||||
Sbjct: 56936 cttccttggaggcgctggaggg 56957

>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete
              sequence
          Length = 310958

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 306    cttccttggaggcgctggaggg 327
              ||||||||||||||||||||||
Sbjct: 144989 cttccttggaggcgctggaggg 145010

>gb|AC092729.3| Canis familiaris clone RP81-60B6, complete sequence
          Length = 165116

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   tgcctctctttgtctttctg 423
             ||||||||||||||||||||
Sbjct: 82678 tgcctctctttgtctttctg 82697

>emb|AL365362.9| Human DNA sequence from clone RP5-1017O19 on chromosome 1 Contains a
            pseudogene similar to part of GDP dissociation inhibitor
            2 (GDI2), complete sequence
          Length = 92339

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   atatgcatacagcccaagca 77
            ||||||||||||||||||||
Sbjct: 8568 atatgcatacagcccaagca 8587

>emb|AL354811.13| Human DNA sequence from clone RP11-632L2 on chromosome 13 Contains a
             novel gene, the 5' end of the GPC6 gene for glypican 6 and
             a CpG island, complete sequence
          Length = 181567

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   aaataattacttctaagaaa 138
             ||||||||||||||||||||
Sbjct: 95180 aaataattacttctaagaaa 95199

>gb|AC020656.33| Homo sapiens 12 BAC RP11-1143G9 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 123070

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  atccattctctccatgatgt 259
            ||||||||||||||||||||
Sbjct: 2404 atccattctctccatgatgt 2423

>gb|AC013276.5| Homo sapiens BAC clone RP11-467A23 from 2, complete sequence
          Length = 53394

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 400   cttttgcctctctttgtctt 419
             ||||||||||||||||||||
Sbjct: 29621 cttttgcctctctttgtctt 29640

>gb|AC104395.4| Homo sapiens BAC clone RP11-488M9 from 2, complete sequence
          Length = 114032

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 45    tgccagtttccctatatgcataca 68
             ||||||||||||||| ||||||||
Sbjct: 12109 tgccagtttccctatttgcataca 12132

>gb|AC093350.15| Mus musculus chromosome 3, clone RP23-16G3, complete sequence
          Length = 200326

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   ataatgacaaaataattact 174
             ||||||||||||||||||||
Sbjct: 33141 ataatgacaaaataattact 33160

>gb|AC125099.3| Mus musculus BAC clone RP24-201C14 from 3, complete sequence
          Length = 166720

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   ataatgacaaaataattact 174
             ||||||||||||||||||||
Sbjct: 67552 ataatgacaaaataattact 67533

>gb|AC136457.3| Mus musculus BAC clone RP23-76G19 from chromosome 13, complete sequence
          Length = 204369

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 181    gaattgtatttcataaagga 200
              ||||||||||||||||||||
Sbjct: 140669 gaattgtatttcataaagga 140650


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,369,003
Number of Sequences: 3902068
Number of extensions: 4369003
Number of successful extensions: 85045
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84978
Number of HSP's gapped (non-prelim): 67
length of query: 428
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 406
effective length of database: 17,147,199,772
effective search space: 6961763107432
effective search space used: 6961763107432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)