ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet113h12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| Sbjct: 441 tcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccga 382 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 381 gcacgttggccttga 367
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| Sbjct: 26833570 tcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccga 26833511 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 26833510 gcacgttggccttga 26833496 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 289 gcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttgac 348 ||||| |||||| ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 26823978 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 26823919 Query: 349 ggggatgttgaggacgatgccgaggacgttg 379 ||||| ||||||| ||| ||||||| |||| Sbjct: 26823918 ggggaggttgaggttgattccgaggatgttg 26823888 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 348 cggggatgttgaggacgatgccgaggacgt 377 |||||| |||||||||| |||||||||||| Sbjct: 10774013 cggggaggttgaggacgctgccgaggacgt 10774042
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| Sbjct: 12113 tcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccga 12054 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 12053 gcacgttggccttga 12039 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 289 gcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttgac 348 ||||| |||||| ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 2521 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 2462 Query: 349 ggggatgttgaggacgatgccgaggacgttg 379 ||||| ||||||| ||| ||||||| |||| Sbjct: 2461 ggggaggttgaggttgattccgaggatgttg 2431
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| Sbjct: 99623 tcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccga 99564 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 99563 gcacgttggccttga 99549 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 289 gcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttgac 348 ||||| |||||| ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 90031 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 89972 Query: 349 ggggatgttgaggacgatgccgaggacgttg 379 ||||| ||||||| ||| ||||||| |||| Sbjct: 89971 ggggaggttgaggttgattccgaggatgttg 89941
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 109 bits (55), Expect = 7e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| Sbjct: 441 tcttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccga 382 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 381 gcacgttggccttga 367
>gb|AY108411.1| Zea mays PCO134698 mRNA sequence Length = 667 Score = 103 bits (52), Expect = 4e-19 Identities = 88/100 (88%) Strand = Plus / Minus Query: 287 gcgcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttg 346 |||||| ||||||||| ||| || |||||||||||||||||||||| ||| |||||||| Sbjct: 508 gcgcacaggaagccctgagggacgctcttgccgcagtagttgaggagcagggtgagcttg 449 Query: 347 acggggatgttgaggacgatgccgaggacgttggccttga 386 ||||||| || |||| ||||||||| ||||||||||||| Sbjct: 448 acggggacgtcgaggttgatgccgagcacgttggccttga 409
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 289 gcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttgac 348 ||||| |||||| ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 349 ggggatgttgaggacgatgccgaggacgttg 379 ||||| ||||||| ||| ||||||| |||| Sbjct: 438 ggggaggttgaggttgattccgaggatgttg 408
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||||||||||| || ||||| Sbjct: 373 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 314 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 313 gcacgttggccttga 299
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||||||| Sbjct: 366 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 307 Query: 373 gacgttg 379 || |||| Sbjct: 306 gatgttg 300
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||||||| Sbjct: 441 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 382 Query: 373 gacgttg 379 || |||| Sbjct: 381 gatgttg 375
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||||||| Sbjct: 144413 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 144354 Query: 373 gacgttg 379 || |||| Sbjct: 144353 gatgttg 144347 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||| |||||||||| |||||||| ||||| || |||||||||| ||||| |||||| Sbjct: 157745 cttgccacagtagttgacaaggaggctcagcttcaccgggatgttgacgacgacgccgag 157686 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 157685 cacgttggccttga 157672 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||||||||||||| ||||||||| | |||||||| ||| ||| ||||||||| Sbjct: 147613 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttaaggttgatgccgag 147554 Query: 373 gacgttggccttga 386 | |||| |||||| Sbjct: 147553 aatgttgcccttga 147540
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||||||||||| || ||||| Sbjct: 34252 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 34193 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 34192 gcacgttggccttga 34178 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | |||||||| || ||| |||||||| Sbjct: 30806 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 30747 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 30746 gcacgttggccttga 30732 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgagg 361 |||||||||||| |||||||| ||||||||| | |||||||||||||||| Sbjct: 62140 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgagg 62091 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 |||||||||||| | |||||||| ||| |||||| |||||||| ||||||| || ||| Sbjct: 66509 ggtcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgcc 66450 Query: 370 gaggacgttggcctt 384 ||| ||||||||||| Sbjct: 66449 gagcacgttggcctt 66435 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||| |||||| |||||| | Sbjct: 27538 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 27479 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 27478 gcacgttggccttga 27464 Score = 46.1 bits (23), Expect = 0.084 Identities = 62/75 (82%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||| | |||||||| |||||| || | ||||| || |||||| ||||||| Sbjct: 49983 tcttgccgcacttgttgaggatgaggcttagatcgacggcgaggttgagtttcatgccga 49924 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 49923 gcacgttggccttga 49909
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 77.8 bits (39), Expect = 2e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||||||||||||| ||||||||| | |||||||| ||||||| ||||||||| Sbjct: 27713787 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttgaggttgatgccgag 27713728 Query: 373 gacgttg 379 || |||| Sbjct: 27713727 gatgttg 27713721 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||| |||||||||| |||||||| ||||| || |||||||||| ||||| |||||| Sbjct: 27727119 cttgccacagtagttgacaaggaggctcagcttcaccgggatgttgacgacgacgccgag 27727060 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 27727059 cacgttggccttga 27727046 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||||||||||||| ||||||||| | |||||||| ||| ||| ||||||||| Sbjct: 27716987 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttaaggttgatgccgag 27716928 Query: 373 gacgttggccttga 386 | |||| |||||| Sbjct: 27716927 aatgttgcccttga 27716914
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||||||||||| || ||||| Sbjct: 21171454 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 21171513 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21171514 gcacgttggccttga 21171528 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | |||||||| || ||| |||||||| Sbjct: 21174900 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 21174959 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21174960 gcacgttggccttga 21174974 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||| ||||||||| ||||||||| | || ||||| ||||||| |||||| || Sbjct: 21267507 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgaggttgatgcccag 21267448 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 21267447 cacgttggccttga 21267434 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgagg 361 |||||||||||| |||||||| ||||||||| | |||||||||||||||| Sbjct: 21143566 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgagg 21143615 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||| |||||| |||||| | Sbjct: 21178168 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 21178227 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21178228 gcacgttggccttga 21178242 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 |||||||||||| | |||||||| ||| |||||| |||||||| ||||||| || ||| Sbjct: 21139197 ggtcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgcc 21139256 Query: 370 gaggacgttggcctt 384 ||| ||||||||||| Sbjct: 21139257 gagcacgttggcctt 21139271 Score = 46.1 bits (23), Expect = 0.084 Identities = 62/75 (82%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||| | |||||||| |||||| || | ||||| || |||||| ||||||| Sbjct: 21155723 tcttgccgcacttgttgaggatgaggcttagatcgacggcgaggttgagtttcatgccga 21155782 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21155783 gcacgttggccttga 21155797
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 289 gcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttgac 348 ||||| |||||| ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 349 ggggatgttgaggacgatgccgaggacgttg 379 ||||| ||||||| ||| ||||||| |||| Sbjct: 438 ggggaggttgaggttgattccgaggatgttg 408
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||||||||||| || ||||| Sbjct: 460 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 401 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 400 gcacgttggccttga 386
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||||||||||| || ||||| Sbjct: 21182718 tcttgccgcagttgttgaggatgaggctgaggtcgatggggatgttgaggttgaggccga 21182777 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21182778 gcacgttggccttga 21182792 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | |||||||| || ||| |||||||| Sbjct: 21186164 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 21186223 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21186224 gcacgttggccttga 21186238 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||| ||||||||| ||||||||| | || ||||| ||||||| |||||| || Sbjct: 21278771 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgaggttgatgcccag 21278712 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 21278711 cacgttggccttga 21278698 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgagg 361 |||||||||||| |||||||| ||||||||| | |||||||||||||||| Sbjct: 21154830 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgagg 21154879 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||| |||||| |||||| | Sbjct: 21189432 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 21189491 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21189492 gcacgttggccttga 21189506 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 |||||||||||| | |||||||| ||| |||||| |||||||| ||||||| || ||| Sbjct: 21150461 ggtcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgcc 21150520 Query: 370 gaggacgttggcctt 384 ||| ||||||||||| Sbjct: 21150521 gagcacgttggcctt 21150535 Score = 46.1 bits (23), Expect = 0.084 Identities = 62/75 (82%) Strand = Plus / Plus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||| | |||||||| |||||| || | ||||| || |||||| ||||||| Sbjct: 21166987 tcttgccgcacttgttgaggatgaggcttagatcgacggcgaggttgagtttcatgccga 21167046 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 21167047 gcacgttggccttga 21167061
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 289 gcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttgac 348 ||||| |||||| ||||| |||||||||||||||||||||||| ||||||||| | || Sbjct: 423 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 364 Query: 349 ggggatgttgaggacgatgccgaggacgttg 379 ||||| ||||||| ||| ||||||| |||| Sbjct: 363 ggggaggttgaggttgattccgaggatgttg 333
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||| |||||||||| |||||||| ||||| || |||||||||| ||||| |||||| Sbjct: 384 cttgccacagtagttgacaaggaggctcagcttcaccgggatgttgacgacgacgccgag 325 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 324 cacgttggccttga 311
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| ||||||||||||||||||| ||| | |||||||| ||||| | |||||| Sbjct: 189917 ggtcttgtggcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgcc 189858 Query: 370 gaggacgttggccttga 386 ||||||||||||||||| Sbjct: 189857 gaggacgttggccttga 189841 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||| |||||||||||| |||| ||||| ||||||| |||||| |||| Sbjct: 198932 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgccaaggat 198873 Query: 376 gttggc 381 |||||| Sbjct: 198872 gttggc 198867 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| |||||||||||| ||||| ||| | ||||||||||||||| |||||| Sbjct: 187213 ggtcttgtggcagtagttgagaaggagagagagatcgacggggatgttgagattgatgcc 187154 Query: 370 gaggacgttggccttga 386 ||||| ||||||||||| Sbjct: 187153 gaggatgttggccttga 187137
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| ||||||||||||||||||| ||| | |||||||| ||||| | |||||| Sbjct: 26984 ggtcttgtggcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgcc 26925 Query: 370 gaggacgttggccttga 386 ||||||||||||||||| Sbjct: 26924 gaggacgttggccttga 26908 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||| |||||||||||| |||| ||||| ||||||| |||||| |||| Sbjct: 35999 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgccaaggat 35940 Query: 376 gttggc 381 |||||| Sbjct: 35939 gttggc 35934 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| |||||||||||| ||||| ||| | ||||||||||||||| |||||| Sbjct: 24280 ggtcttgtggcagtagttgagaaggagagagagatcgacggggatgttgagattgatgcc 24221 Query: 370 gaggacgttggccttga 386 ||||| ||||||||||| Sbjct: 24220 gaggatgttggccttga 24204
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| ||||||||||||||||||| ||| | |||||||| ||||| | |||||| Sbjct: 123917 ggtcttgtggcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgcc 123858 Query: 370 gaggacgttggccttga 386 ||||||||||||||||| Sbjct: 123857 gaggacgttggccttga 123841 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||| |||||||||||| |||| ||||| ||||||| |||||| |||| Sbjct: 132932 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgccaaggat 132873 Query: 376 gttggc 381 |||||| Sbjct: 132872 gttggc 132867 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| |||||||||||| ||||| ||| | ||||||||||||||| |||||| Sbjct: 121213 ggtcttgtggcagtagttgagaaggagagagagatcgacggggatgttgagattgatgcc 121154 Query: 370 gaggacgttggccttga 386 ||||| ||||||||||| Sbjct: 121153 gaggatgttggccttga 121137
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| ||||||||||||||||||| ||| | |||||||| ||||| | |||||| Sbjct: 189917 ggtcttgtggcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgcc 189858 Query: 370 gaggacgttggccttga 386 ||||||||||||||||| Sbjct: 189857 gaggacgttggccttga 189841 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||| |||||||||||| |||| ||||| ||||||| |||||| |||| Sbjct: 198932 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgccaaggat 198873 Query: 376 gttggc 381 |||||| Sbjct: 198872 gttggc 198867 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| |||||||||||| ||||| ||| | ||||||||||||||| |||||| Sbjct: 187213 ggtcttgtggcagtagttgagaaggagagagagatcgacggggatgttgagattgatgcc 187154 Query: 370 gaggacgttggccttga 386 ||||| ||||||||||| Sbjct: 187153 gaggatgttggccttga 187137
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| ||||||||||||||||||| ||| | |||||||| ||||| | |||||| Sbjct: 72737 ggtcttgtggcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgcc 72796 Query: 370 gaggacgttggccttga 386 ||||||||||||||||| Sbjct: 72797 gaggacgttggccttga 72813 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||| |||||||||||| |||| ||||| ||||||| |||||| |||| Sbjct: 63724 gccgcagtagttgacgaggaggctgaggttgatggggaggttgaggttgatgccaaggat 63783 Query: 376 gttggc 381 |||||| Sbjct: 63784 gttggc 63789 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| |||||||||||| ||||| ||| | ||||||||||||||| |||||| Sbjct: 75441 ggtcttgtggcagtagttgagaaggagagagagatcgacggggatgttgagattgatgcc 75500 Query: 370 gaggacgttggccttga 386 ||||| ||||||||||| Sbjct: 75501 gaggatgttggccttga 75517
>dbj|AK063037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D01, full insert sequence Length = 498 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| ||||||||||||||||||| ||| | |||||||| ||||| | |||||| Sbjct: 251 ggtcttgtggcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgcc 192 Query: 370 gaggacgttggccttga 386 ||||||||||||||||| Sbjct: 191 gaggacgttggccttga 175
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 73.8 bits (37), Expect = 4e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| ||||||||||||||||||| ||| | |||||||| ||||| | |||||| Sbjct: 489 ggtcttgtggcagtagttgaggaggaggacgaggtcgacggggacgttgatgttgatgcc 430 Query: 370 gaggacgttggccttga 386 ||||||||||||||||| Sbjct: 429 gaggacgttggccttga 413
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 287 gcgcactggaagcccttgggggcggtcttgccgcagtagttgaggaggaggctgagcttg 346 ||||| |||||| | |||||| | |||||||||||| |||||||| ||||||||| | | Sbjct: 465 gcgcagtggaagtcgttggggcagttcttgccgcagttgttgaggatgaggctgaggtcg 406 Query: 347 acggggatgttgaggacgatgccgaggacgttggccttga 386 | ||||| ||| ||| ||||||||||| ||||||||||| Sbjct: 405 atggggaggttaaggttgatgccgaggatgttggccttga 366
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 71.9 bits (36), Expect = 1e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 315 tgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgagga 374 ||||||||||||||| |||||||||||| |||| ||| | ||||||| |||||| |||| Sbjct: 539 tgccgcagtagttgacgaggaggctgaggttgatgggcaggttgaggttgatgcccagga 480 Query: 375 cgttggcc 382 |||||||| Sbjct: 479 cgttggcc 472
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | |||||||| || ||| |||||||| Sbjct: 343 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 284 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 283 gcacgttggccttga 269
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 69.9 bits (35), Expect = 6e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | |||||||| || ||| |||||||| Sbjct: 428 tcttgccgcagttgttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccga 369 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 368 gcacgttggccttga 354
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgagg 361 |||||||||||| |||||||| ||||||||| | |||||||||||||||| Sbjct: 403 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgagg 354
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||||||||||||| ||||||||| | |||||||| ||| ||| ||||||||| Sbjct: 366 cttgccgcagtagttgaggatgaggctgaggtcgacggggaggttaaggttgatgccgag 307 Query: 373 gacgttggccttga 386 | |||| |||||| Sbjct: 306 aatgttgcccttga 293
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||||||| ||||||||| ||||||||| | || ||||| ||||||| |||||| || Sbjct: 66852 cttgccgcagaagttgaggatgaggctgaggtggatggggaggttgaggttgatgcccag 66911 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 66912 cacgttggccttga 66925
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgagg 361 |||||||||||| |||||||| ||||||||| | |||||||||||||||| Sbjct: 482 tcttgccgcagttgttgaggatgaggctgagatcgacggggatgttgagg 433
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||| |||||| |||||| | Sbjct: 367 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 308 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 307 gcacgttggccttga 293
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 |||||||||||| | |||||||| ||| |||||| |||||||| ||||||| || ||| Sbjct: 417 ggtcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgcc 358 Query: 370 gaggacgttggcctt 384 ||| ||||||||||| Sbjct: 357 gagcacgttggcctt 343
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| ||||||||| | || ||||| |||||| |||||| | Sbjct: 436 tcttgccgcagttgttgaggatgaggctgaggtcgatggggaggttgagcttgatgccca 377 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 376 gcacgttggccttga 362
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||||| |||||||| |||| |||| | | ||| || |||||| |||||||| Sbjct: 446 tcttgccgcagttgttgaggatgaggttgaggctaaggggcatattgaggtggatgccga 387 Query: 372 ggacgttggccttga 386 ||||||||||||||| Sbjct: 386 ggacgttggccttga 372
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 |||||||||||| | |||||||| ||| |||||| |||||||| ||||||| || ||| Sbjct: 2073 ggtcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgcc 2014 Query: 370 gaggacgttggcctt 384 ||| ||||||||||| Sbjct: 2013 gagcacgttggcctt 1999
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 61.9 bits (31), Expect = 1e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 |||||||||||| | |||||||| ||| |||||| |||||||| ||||||| || ||| Sbjct: 461 ggtcttgccgcacttgttgaggatgagcttgagctcgacggggacgttgaggttgacgcc 402 Query: 370 gaggacgttggcctt 384 ||| ||||||||||| Sbjct: 401 gagcacgttggcctt 387
>dbj|AB018588.1| Zea mays ZmGR1b mRNA, complete cds Length = 813 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||| |||||||||| |||| ||||||||||| ||||| | || ||||| |||||| Sbjct: 415 cttgccacagtagttgacgagggcgctgagcttgatggggacatcgatgacgacgccgag 356 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 355 cacgttggccttga 342
>dbj|AB018587.1| Zea mays ZmGR1a mRNA, complete cds Length = 833 Score = 60.0 bits (30), Expect = 6e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 313 cttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgag 372 |||||| |||||||||| |||| ||||||||||| ||||| | || ||||| |||||| Sbjct: 418 cttgccacagtagttgacgagggcgctgagcttgatggggacatcgatgacgacgccgag 359 Query: 373 gacgttggccttga 386 ||||||||||||| Sbjct: 358 cacgttggccttga 345
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| |||||||||||| ||||| ||| | ||||||||||||||| |||||| Sbjct: 507 ggtcttgtggcagtagttgagaaggagagagagatcgacggggatgttgagattgatgcc 448 Query: 370 gaggacgttggccttga 386 ||||| ||||||||||| Sbjct: 447 gaggatgttggccttga 431
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 310 ggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgcc 369 ||||||| |||||||||||| ||||| ||| | ||||||||||||||| |||||| Sbjct: 528 ggtcttgtggcagtagttgagaaggagagagagatcgacggggatgttgagattgatgcc 469 Query: 370 gaggacgttggccttga 386 ||||| ||||||||||| Sbjct: 468 gaggatgttggccttga 452
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 309 cggtcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgag 360 ||||||||||||||| |||||||| ||||||||| | |||||| | |||||| Sbjct: 448 cggtcttgccgcagtggttgaggatgaggctgaggtcgacgggcaggttgag 397
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 56.0 bits (28), Expect = 9e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 315 tgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgagga 374 ||||||||| |||||||| |||| |||| | | ||| | ||||||| ||||||||||| Sbjct: 437 tgccgcagttgttgaggatgaggttgaggctaaggggcacgttgaggtggatgccgagga 378 Query: 375 cgttggccttga 386 |||||||||||| Sbjct: 377 cgttggccttga 366
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Minus Query: 355 gttgaggacgatgccgaggacgttggccttga 386 ||||||| ||||||||||||||||||||||| Sbjct: 335 gttgaggtggatgccgaggacgttggccttga 304
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 48.1 bits (24), Expect = 0.021 Identities = 60/72 (83%) Strand = Plus / Minus Query: 315 tgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgagga 374 ||||||||| |||||||| |||| |||| | | ||| | || |||| ||||||||||| Sbjct: 450 tgccgcagttgttgaggatgaggttgaggctaaggggcacgtggaggtggatgccgagga 391 Query: 375 cgttggccttga 386 |||||||||||| Sbjct: 390 cgttggccttga 379
>ref|NM_185320.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 46.1 bits (23), Expect = 0.084 Identities = 59/71 (83%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||||||||||| ||| | |||||||| || |||| || |||||| | Sbjct: 318 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 259 Query: 376 gttggccttga 386 |||||| |||| Sbjct: 258 gttggcgttga 248
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 46.1 bits (23), Expect = 0.084 Identities = 62/75 (82%) Strand = Plus / Minus Query: 312 tcttgccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccga 371 |||||||||| | |||||||| |||||| || | ||||| || |||||| ||||||| Sbjct: 385 tcttgccgcacttgttgaggatgaggcttagatcgacggcgaggttgagtttcatgccga 326 Query: 372 ggacgttggccttga 386 | ||||||||||||| Sbjct: 325 gcacgttggccttga 311
>gb|AF149815.1| Oryza sativa unknown gene Length = 1293 Score = 46.1 bits (23), Expect = 0.084 Identities = 59/71 (83%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||||||||||| ||| | |||||||| || |||| || |||||| | Sbjct: 160 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 101 Query: 376 gttggccttga 386 |||||| |||| Sbjct: 100 gttggcgttga 90
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.084 Identities = 59/71 (83%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||||||||||| ||| | |||||||| || |||| || |||||| | Sbjct: 343474 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 343415 Query: 376 gttggccttga 386 |||||| |||| Sbjct: 343414 gttggcgttga 343404
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 46.1 bits (23), Expect = 0.084 Identities = 59/71 (83%) Strand = Plus / Minus Query: 316 gccgcagtagttgaggaggaggctgagcttgacggggatgttgaggacgatgccgaggac 375 |||||||||||||||||||||| ||| | |||||||| || |||| || |||||| | Sbjct: 53427 gccgcagtagttgaggaggagggagaggtcgacggggacgtcgaggttgaggccgagaag 53368 Query: 376 gttggccttga 386 |||||| |||| Sbjct: 53367 gttggcgttga 53357
>ref|XM_464987.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Minus Query: 348 cggggatgttgaggacgatgccgaggacgt 377 |||||| |||||||||| |||||||||||| Sbjct: 391 cggggaggttgaggacgctgccgaggacgt 362
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 348 cggggatgttgaggacgatgccgaggacgt 377 |||||| |||||||||| |||||||||||| Sbjct: 113494 cggggaggttgaggacgctgccgaggacgt 113523
>gb|AY105149.1| Zea mays PCO087109 mRNA sequence Length = 966 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 361 gacgatgccgaggacgttggccttga 386 ||||| |||||||||||||||||||| Sbjct: 500 gacgacgccgaggacgttggccttga 475
>gb|AC159228.2| Mus musculus BAC clone RP24-338I14 from chromosome 13, complete sequence Length = 158726 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 210 aacatacatgcatggacgcatgcac 234 |||||| |||||||||||||||||| Sbjct: 51828 aacatagatgcatggacgcatgcac 51804
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 295 gaagcccttgggggcggtcttgccgcagtagtt 327 |||||| |||||| |||||||||||| |||||| Sbjct: 5164809 gaagccattggggtcggtcttgccgctgtagtt 5164841
>gb|AC173481.1| Mus musculus BAC clone RP23-411A24 from chromosome 13, complete sequence Length = 203948 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 210 aacatacatgcatggacgcatgcac 234 |||||| |||||||||||||||||| Sbjct: 64136 aacatagatgcatggacgcatgcac 64160
>gb|AC121514.14| Mus musculus chromosome 8, clone RP24-394H9, complete sequence Length = 168316 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gttgaagcacacacacgcac 36 |||||||||||||||||||| Sbjct: 59025 gttgaagcacacacacgcac 59006
>gb|AC161571.11| Mus musculus chromosome 7, clone RP23-403M22, complete sequence Length = 211052 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 agccaaactaagacaaatta 88 |||||||||||||||||||| Sbjct: 58117 agccaaactaagacaaatta 58098
>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032N11 map near 50283S, complete sequence Length = 139217 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ggcgatgcatgcatgcatgc 255 |||||||||||||||||||| Sbjct: 111650 ggcgatgcatgcatgcatgc 111631
>gb|AC159614.7| Mus musculus chromosome 1, clone RP24-305O23, complete sequence Length = 156924 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 211 acatacatgcatggacgcatgcac 234 ||||||||||||| |||||||||| Sbjct: 39454 acatacatgcatgcacgcatgcac 39477
>gb|AC165253.2| Mus musculus BAC clone RP23-413P10 from chromosome 9, complete sequence Length = 200549 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 acatgcatggacgcatgcac 234 |||||||||||||||||||| Sbjct: 35417 acatgcatggacgcatgcac 35436
>emb|CR640683.2|CNS0ETBL Tetraodon nigroviridis full-length cDNA Length = 1140 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 acacacgcacgcacgaacga 140 |||||||||||||||||||| Sbjct: 34 acacacgcacgcacgaacga 15
>gb|AY343333.1| Enterobacteria phage RB49, complete genome Length = 164018 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 acgcacgaacgaaaaactac 148 |||||||||||||||||||| Sbjct: 109550 acgcacgaacgaaaaactac 109569
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaaccagtgcatataaatgaaca 123 |||| ||||||||||||||||||| Sbjct: 1189842 ttaagcagtgcatataaatgaaca 1189819
>gb|AC158295.5| Mus musculus chromosome 8, clone RP24-208G23, complete sequence Length = 167209 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gttgaagcacacacacgcac 36 |||||||||||||||||||| Sbjct: 82309 gttgaagcacacacacgcac 82328
>dbj|AB081624.1| Misgurnus anguillicaudatus DNA, microsatellite Mac43 Length = 390 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 atgcatgcatgccttgctttggtt 267 |||||||||||| ||||||||||| Sbjct: 249 atgcatgcatgcattgctttggtt 226
>gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, complete sequence Length = 212555 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaaccagtgcatataaatgaaca 123 |||| ||||||||||||||||||| Sbjct: 118123 ttaagcagtgcatataaatgaaca 118100
>gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, complete sequence Length = 185249 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 ttaaccagtgcatataaatgaaca 123 |||| ||||||||||||||||||| Sbjct: 153349 ttaagcagtgcatataaatgaaca 153372
>gb|AC093494.1| Homo sapiens chromosome 3 clone RP11-1004I19 map 3p, complete sequence Length = 159189 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaagaagataacaacataca 217 |||||||||||||||||||| Sbjct: 151769 aaagaagataacaacataca 151750
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 100 ttaaccagtgcatataaatgaaca 123 |||| ||||||||||||||||||| Sbjct: 1189842 ttaagcagtgcatataaatgaaca 1189819
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 atgcatgcatgcatgccttg 259 |||||||||||||||||||| Sbjct: 21858116 atgcatgcatgcatgccttg 21858135
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ggcgatgcatgcatgcatgc 255 |||||||||||||||||||| Sbjct: 14496816 ggcgatgcatgcatgcatgc 14496797
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtacgtagtacacagccaaa 75 |||||||||||||||||||| Sbjct: 20178807 gtacgtagtacacagccaaa 20178826
>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone BACR02L12, complete sequence Length = 178931 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaatgaacacacgcacgcac 134 |||||||||||||||||||| Sbjct: 107238 aaatgaacacacgcacgcac 107219
>gb|AC009846.9|AC009846 Drosophila melanogaster, chromosome 3R, region 94C-94D, BAC clone BACR23F10, complete sequence Length = 164038 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaatgaacacacgcacgcac 134 |||||||||||||||||||| Sbjct: 29301 aaatgaacacacgcacgcac 29282
>gb|AC091492.2| Homo sapiens chromosome 3 clone RP11-335I9 map 3p, complete sequence Length = 180963 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaagaagataacaacataca 217 |||||||||||||||||||| Sbjct: 70981 aaagaagataacaacataca 70962
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtacgtagtacacagccaaa 75 |||||||||||||||||||| Sbjct: 72307 gtacgtagtacacagccaaa 72326
>gb|AC118007.11| Mus musculus chromosome 9, clone RP23-377N5, complete sequence Length = 203921 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 acatgcatggacgcatgcac 234 |||||||||||||||||||| Sbjct: 91933 acatgcatggacgcatgcac 91952
>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the complete sequence Length = 234378 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aaatgaacacacgcacgcac 134 |||||||||||||||||||| Sbjct: 15952 aaatgaacacacgcacgcac 15933
>gb|AC147744.17| Mus musculus chromosome 18, clone RP23-398N23, complete sequence Length = 201455 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 catataaatgaacacacgca 129 |||||||||||||||||||| Sbjct: 150841 catataaatgaacacacgca 150860
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ggcgatgcatgcatgcatgc 255 |||||||||||||||||||| Sbjct: 14578817 ggcgatgcatgcatgcatgc 14578798
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 atgcatgcatgcatgccttg 259 |||||||||||||||||||| Sbjct: 21786461 atgcatgcatgcatgccttg 21786480
>emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb0087J18 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121592 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atgcatgcatgcatgccttg 259 |||||||||||||||||||| Sbjct: 65216 atgcatgcatgcatgccttg 65197
>emb|AL731670.13| Mouse DNA sequence from clone RP23-463E7 on chromosome 11, complete sequence Length = 198411 Score = 40.1 bits (20), Expect = 5.2 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 6 atcaaattactgtt-gaagcacacacac 32 |||||||||||||| ||||||||||||| Sbjct: 107962 atcaaattactgtttgaagcacacacac 107989
>emb|AL805952.11| Mouse DNA sequence from clone RP23-125H10 on chromosome 4, complete sequence Length = 199540 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 gaacacacgcacgcacgaacgaaa 142 ||||||||||||||||| |||||| Sbjct: 192370 gaacacacgcacgcacgcacgaaa 192393 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,285,210 Number of Sequences: 3902068 Number of extensions: 4285210 Number of successful extensions: 121114 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 120043 Number of HSP's gapped (non-prelim): 1070 length of query: 386 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 364 effective length of database: 17,147,199,772 effective search space: 6241580717008 effective search space used: 6241580717008 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
