ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet113h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 78 3e-11
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
3gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare str... 78 3e-11
4dbj|AK104936.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
5dbj|AK068353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
6gb|AY110228.1| Zea mays CL32412_1 mRNA sequence 78 3e-11
7tpe|BN000568.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 78 3e-11
8ref|NM_194553.1| Oryza sativa (japonica cultivar-group) putative... 62 2e-06
9gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
10gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica culti... 62 2e-06
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
12dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
13dbj|AK104633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
14dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
15tpe|BN000654.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 62 2e-06
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
17emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 44 0.38
18dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 44 0.38
19gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete... 44 0.38
20gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, co... 44 0.38
21gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, compl... 44 0.38
22dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 44 0.38
23dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 44 0.38
24emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 44 0.38
25emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 44 0.38
26ref|XM_522898.1| PREDICTED: Pan troglodytes similar to WD repeat... 42 1.5
27gb|BT017640.1| Zea mays clone EL01N0438G07.c mRNA sequence 42 1.5
28gb|AY857761.1| Triticum monococcum peroxidase 7 (POX7) mRNA, com... 42 1.5
29emb|AJ849350.1| Staphylococcus aureus partial tpi71 gene for tri... 42 1.5
30emb|AJ849348.1| Staphylococcus aureus partial tpi67 gene for tri... 42 1.5
31gb|AC122290.4| Mus musculus BAC clone RP23-254P19 from chromosom... 42 1.5
32emb|CR457441.5| Zebrafish DNA sequence from clone CH211-181D7 in... 42 1.5
33emb|CR713387.2|CNS0GDEF Tetraodon nigroviridis full-length cDNA 42 1.5
34gb|AY032674.1| Nicotiana tabacum peroxidase (PER9-6) mRNA, compl... 42 1.5
35gb|AY106563.1| Zea mays PCO123005 mRNA sequence 42 1.5
36emb|AL929123.9| Mouse DNA sequence from clone RP23-328K3 on chro... 42 1.5
37gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.0
38ref|NM_120756.2| Arabidopsis thaliana peroxidase AT5G06730 mRNA,... 40 6.0
39ref|NM_194528.1| Oryza sativa (japonica cultivar-group) putative... 40 6.0
40ref|XM_478980.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
41gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
42gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, com... 40 6.0
43gb|AC150309.1| Latimeria menadoensis clone VMRC4-39G19, complete... 40 6.0
44ref|NM_181340.1| Homo sapiens WD repeat domain 21A (WDR21A), tra... 40 6.0
45ref|NM_015604.2| Homo sapiens WD repeat domain 21A (WDR21A), tra... 40 6.0
46gb|AY519360.1| Arabidopsis thaliana peroxidase ATP29a gene, comp... 40 6.0
47ref|XM_547889.2| PREDICTED: Canis familiaris similar to WD repea... 40 6.0
48emb|CR382378.12| Zebrafish DNA sequence from clone DKEYP-40G12 i... 40 6.0
49emb|AL354771.14| Human DNA sequence from clone RP11-545P21 on ch... 40 6.0
50emb|Y11794.1|ATP29A A.thaliana mRNA for peroxidase ATP29a, partial 40 6.0
51gb|BT008584.1| Arabidopsis thaliana clone U51349 putative peroxi... 40 6.0
52emb|AL080157.1|HSM800674 Homo sapiens mRNA; cDNA DKFZp434K114 (f... 40 6.0
53dbj|AK027745.1| Homo sapiens cDNA FLJ14839 fis, clone OVARC1001791 40 6.0
54dbj|AK139392.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 6.0
55gb|AC011631.6|AC011631 Homo sapiens, clone RP11-1I20, complete s... 40 6.0
56emb|AL954370.3| Mouse DNA sequence from clone RP23-180P4 on chro... 40 6.0
57dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
58emb|BX831603.1|CNS0A10N Arabidopsis thaliana Full-length cDNA Co... 40 6.0
59gb|BC035901.1| Homo sapiens WD repeat domain 21A, transcript var... 40 6.0
60gb|BC018979.2| Homo sapiens WD repeat domain 21A, transcript var... 40 6.0
61gb|AY088509.1| Arabidopsis thaliana clone 7360 mRNA, complete se... 40 6.0
62dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
63emb|BX005219.12| Mouse DNA sequence from clone RP23-343B19 on ch... 40 6.0
64dbj|AP002032.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.0
65dbj|AK118827.1| Arabidopsis thaliana At5g06730 mRNA for putative... 40 6.0
66dbj|AK063147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
67tpe|BN000653.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.0
68emb|BX247962.1|CNSLT1I5S human full-length cDNA clone CS0DA010YD... 40 6.0
69dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.0

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                          
Query: 388     tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtc 446
               ||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||||
Sbjct: 7094786 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtc 7094844



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                        
Query: 271     atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327
               ||||||||||| |||| ||||||  | ||||||  |||||||||||| | |||||||
Sbjct: 7094675 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 7094731



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                          
Query: 388     tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtc 446
               ||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||||
Sbjct: 7092681 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtc 7092739



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                        
Query: 271     atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327
               ||||||||||| |||| ||||||  | ||||||  |||||||||||| | |||||||
Sbjct: 7092570 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 7092626



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>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0049C20, from chromosome 3, complete sequence
          Length = 136098

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 388   tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtc 446
             ||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||||
Sbjct: 99552 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtc 99494



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 271   atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327
             ||||||||||| |||| ||||||  | ||||||  |||||||||||| | |||||||
Sbjct: 99663 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 99607



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>dbj|AK104936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G10, full
           insert sequence
          Length = 1202

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                      
Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtc 446
           ||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||||
Sbjct: 938 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtc 880



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 271  atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327
            ||||||||||| |||| ||||||  | ||||||  |||||||||||| | |||||||
Sbjct: 1049 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 993



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>dbj|AK068353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013142D12, full
           insert sequence
          Length = 1201

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                      
Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtc 446
           ||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||||
Sbjct: 939 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtc 881



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 271  atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327
            ||||||||||| |||| ||||||  | ||||||  |||||||||||| | |||||||
Sbjct: 1050 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 994



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>gb|AY110228.1| Zea mays CL32412_1 mRNA sequence
          Length = 1199

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 150/187 (80%)
 Strand = Plus / Plus

                                                                       
Query: 235 cggacttctcccttggaggggtccgttatcacccttatgttccccatcttgatcatggaa 294
           |||||||||||  |||| |||||||| | |  | | ||||||||||| ||||||||||| 
Sbjct: 239 cggacttctcctctggacgggtccgtgagcggcttgatgttccccatgttgatcatggac 298

                                                                       
Query: 295 tttgcgaaggccttgaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgcc 354
           |  ||||||  |  ||||||| |||| |||||| |||||||| |||||||||| ||||||
Sbjct: 299 tgcgcgaagctcgcgaagaagtcgtcttggctggccgcgaactggtcgacgatgggcgcc 358

                                                                       
Query: 355 gttgtccccaccgcgagtgggtcagacttgagttcctggtcggactggaggaagccacgg 414
           || || |||  ||| || ||    |||||||| ||||||||||| | ||||| ||| |||
Sbjct: 359 gtggtgccctgcgctaggggcgacgacttgagctcctggtcggagttgaggatgcctcgg 418

                  
Query: 415 ttcacct 421
           |||||||
Sbjct: 419 ttcacct 425



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>tpe|BN000568.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx39 gene for
            class III peroxidase 39 precursor, exons 1-4
          Length = 2005

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                       
Query: 388  tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtc 446
            ||||||||||||||||||||||| ||||||||||  | ||||| |||||||||||||||
Sbjct: 1830 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtc 1772



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 271  atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327
            ||||||||||| |||| ||||||  | ||||||  |||||||||||| | |||||||
Sbjct: 1941 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 1885



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>ref|NM_194553.1| Oryza sativa (japonica cultivar-group) putative peroxidase
           (OSJNBa0015O22.19), mRNA
          Length = 1011

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Minus

                                                                       
Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
           |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 912 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 853

                                                                       
Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
               ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 852 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 793

                      
Query: 429 ggtgaagtagt 439
           |||| ||||||
Sbjct: 792 ggtgtagtagt 782



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
              Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                          
Query: 309    gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
              |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 635109 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 635168

                                                                          
Query: 369    gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
                  ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 635169 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 635228

                         
Query: 429    ggtgaagtagt 439
              |||| ||||||
Sbjct: 635229 ggtgtagtagt 635239



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    atgttccccatcttgatcat 290
              ||||||||||||||||||||
Sbjct: 461759 atgttccccatcttgatcat 461778



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>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar
              Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete
              sequence
          Length = 189349

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                          
Query: 309    gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
              |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 102717 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 102776

                                                                          
Query: 369    gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
                  ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 102777 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 102836

                         
Query: 429    ggtgaagtagt 439
              |||| ||||||
Sbjct: 102837 ggtgtagtagt 102847



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10,
              complete sequence
          Length = 22685906

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                          
Query: 309    gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
              |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 635109 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 635168

                                                                          
Query: 369    gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
                  ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 635169 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 635228

                         
Query: 429    ggtgaagtagt 439
              |||| ||||||
Sbjct: 635229 ggtgtagtagt 635239



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    atgttccccatcttgatcat 290
              ||||||||||||||||||||
Sbjct: 461759 atgttccccatcttgatcat 461778



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>dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C06, full
           insert sequence
          Length = 1447

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Minus

                                                                       
Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
           |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 971 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 912

                                                                       
Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
               ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 911 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 852

                      
Query: 429 ggtgaagtagt 439
           |||| ||||||
Sbjct: 851 ggtgtagtagt 841



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>dbj|AK104633.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C08, full
           insert sequence
          Length = 1382

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Minus

                                                                       
Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
           |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 906 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 847

                                                                       
Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
               ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 846 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 787

                      
Query: 429 ggtgaagtagt 439
           |||| ||||||
Sbjct: 786 ggtgtagtagt 776



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>dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B11, full
           insert sequence
          Length = 1447

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Minus

                                                                       
Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
           |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 971 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 912

                                                                       
Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
               ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 911 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 852

                      
Query: 429 ggtgaagtagt 439
           |||| ||||||
Sbjct: 851 ggtgtagtagt 841



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>tpe|BN000654.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx125 gene for
            class III peroxidase 125 precursor, exons 1-3
          Length = 2806

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Minus

                                                                        
Query: 309  gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
            |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 2707 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 2648

                                                                        
Query: 369  gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
                ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 2647 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 2588

                       
Query: 429  ggtgaagtagt 439
            |||| ||||||
Sbjct: 2587 ggtgtagtagt 2577



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 106/131 (80%)
 Strand = Plus / Plus

                                                                          
Query: 309    gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368
              |||||||||| ||||||||   ||||| ||||||||||| |||||||| |||||   |||
Sbjct: 635106 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 635165

                                                                          
Query: 369    gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428
                  ||  | |||||||| |||||||| |||||||||||||| ||||| ||||  | |||
Sbjct: 635166 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 635225

                         
Query: 429    ggtgaagtagt 439
              |||| ||||||
Sbjct: 635226 ggtgtagtagt 635236



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    atgttccccatcttgatcat 290
              ||||||||||||||||||||
Sbjct: 461756 atgttccccatcttgatcat 461775



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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2322170 acacgcacatcagatgccacac 2322149



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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2401383 acacgcacatcagatgccacac 2401362



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>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome
          Length = 2809422

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2330622 acacgcacatcagatgccacac 2330601



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>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome
          Length = 2821361

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2341277 acacgcacatcagatgccacac 2341256



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>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome
          Length = 2872769

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2394489 acacgcacatcagatgccacac 2394468



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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2343065 acacgcacatcagatgccacac 2343044



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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2331883 acacgcacatcagatgccacac 2331862



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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2430610 acacgcacatcagatgccacac 2430589



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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 146     acacgcacatcagatgccacac 167
               ||||||||||||||||||||||
Sbjct: 2281728 acacgcacatcagatgccacac 2281707



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 60     cgaatgaaatgtgtacatttg 80
              |||||||||||||||||||||
Sbjct: 803612 cgaatgaaatgtgtacatttg 803632



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>ref|XM_522898.1| PREDICTED: Pan troglodytes similar to WD repeat domain 21 isoform 2
           (LOC467501), mRNA
          Length = 1782

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 414 gttcaccttcaggttggtgaagtag 438
           |||||||||| ||||||||||||||
Sbjct: 780 gttcaccttccggttggtgaagtag 756



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>gb|BT017640.1| Zea mays clone EL01N0438G07.c mRNA sequence
          Length = 768

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 300 gaaggccttgaagaaggcgtcctgg 324
           ||||||| |||||||||||||||||
Sbjct: 425 gaaggccctgaagaaggcgtcctgg 401



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>gb|AY857761.1| Triticum monococcum peroxidase 7 (POX7) mRNA, complete cds
          Length = 1319

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 300 gaaggccttgaagaaggcgtcctgg 324
           ||||||| |||||||||||||||||
Sbjct: 985 gaaggccctgaagaaggcgtcctgg 961



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>emb|AJ849350.1| Staphylococcus aureus partial tpi71 gene for triosephosphate
           isomerase
          Length = 402

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  cgaatgaaatgtgtacatttg 80
           |||||||||||||||||||||
Sbjct: 242 cgaatgaaatgtgtacatttg 262



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>emb|AJ849348.1| Staphylococcus aureus partial tpi67 gene for triosephosphate
           isomerase
          Length = 402

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 60  cgaatgaaatgtgtacatttg 80
           |||||||||||||||||||||
Sbjct: 242 cgaatgaaatgtgtacatttg 262



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>gb|AC122290.4| Mus musculus BAC clone RP23-254P19 from chromosome 14, complete sequence
          Length = 163287

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     ttattgcactgaacaataaaa 118
              |||||||||||||||||||||
Sbjct: 107271 ttattgcactgaacaataaaa 107291



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>emb|CR457441.5| Zebrafish DNA sequence from clone CH211-181D7 in linkage group 15,
             complete sequence
          Length = 135398

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    cacgaatgaaatgtgtacatt 78
             |||||||||||||||||||||
Sbjct: 71227 cacgaatgaaatgtgtacatt 71247



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>emb|CR713387.2|CNS0GDEF Tetraodon nigroviridis full-length cDNA
          Length = 613

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 12  ttgaaatgactttttagactt 32
           |||||||||||||||||||||
Sbjct: 546 ttgaaatgactttttagactt 526



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>gb|AY032674.1| Nicotiana tabacum peroxidase (PER9-6) mRNA, complete cds
          Length = 1270

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 276 ccccatcttgatcatggaatt 296
           |||||||||||||||||||||
Sbjct: 950 ccccatcttgatcatggaatt 930



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>gb|AY106563.1| Zea mays PCO123005 mRNA sequence
          Length = 628

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 300 gaaggccttgaagaaggcgtcctgg 324
           ||||||| |||||||||||||||||
Sbjct: 383 gaaggccctgaagaaggcgtcctgg 407



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>emb|AL929123.9| Mouse DNA sequence from clone RP23-328K3 on chromosome 4, complete
             sequence
          Length = 208830

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 422   tcaggttggtgaagtagttct 442
             |||||||||||||||||||||
Sbjct: 19031 tcaggttggtgaagtagttct 19051



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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 299     cgaaggccttgaagaaggcg 318
               ||||||||||||||||||||
Sbjct: 1099502 cgaaggccttgaagaaggcg 1099521



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>ref|NM_120756.2| Arabidopsis thaliana peroxidase AT5G06730 mRNA, complete cds
          Length = 1392

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  atgttccccatcttgatcat 290
            ||||||||||||||||||||
Sbjct: 1010 atgttccccatcttgatcat 991



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>ref|NM_194528.1| Oryza sativa (japonica cultivar-group) putative copia-type
            polyprotein (OSJNBa0065H03.10), mRNA
          Length = 4053

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  atgttccccatcttgatcat 290
            ||||||||||||||||||||
Sbjct: 3986 atgttccccatcttgatcat 3967



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>ref|XM_478980.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 770

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 agccacggttcaccttcagg 426
           ||||||||||||||||||||
Sbjct: 456 agccacggttcaccttcagg 437



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>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0065H03, complete sequence
          Length = 141017

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   atgttccccatcttgatcat 290
             ||||||||||||||||||||
Sbjct: 65933 atgttccccatcttgatcat 65952



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>gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, complete cds
          Length = 1308

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 atgttccccatcttgatcat 290
           ||||||||||||||||||||
Sbjct: 971 atgttccccatcttgatcat 952



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>gb|AC150309.1| Latimeria menadoensis clone VMRC4-39G19, complete sequence
          Length = 196157

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     atgtgtacatttggttgaca 87
              ||||||||||||||||||||
Sbjct: 120476 atgtgtacatttggttgaca 120457



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>ref|NM_181340.1| Homo sapiens WD repeat domain 21A (WDR21A), transcript variant 2,
           mRNA
          Length = 2461

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 415 ttcaccttcaggttggtgaagtag 438
           ||||||||| ||||||||||||||
Sbjct: 758 ttcaccttccggttggtgaagtag 735



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>ref|NM_015604.2| Homo sapiens WD repeat domain 21A (WDR21A), transcript variant 1,
           mRNA
          Length = 2563

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 415 ttcaccttcaggttggtgaagtag 438
           ||||||||| ||||||||||||||
Sbjct: 858 ttcaccttccggttggtgaagtag 835



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>gb|AY519360.1| Arabidopsis thaliana peroxidase ATP29a gene, complete cds
          Length = 1414

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  atgttccccatcttgatcat 290
            ||||||||||||||||||||
Sbjct: 1284 atgttccccatcttgatcat 1265



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>ref|XM_547889.2| PREDICTED: Canis familiaris similar to WD repeat domain 21A isoform
           1 (LOC490767), mRNA
          Length = 1593

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 414 gttcaccttcaggttggtgaagta 437
           |||||||||| |||||||||||||
Sbjct: 789 gttcaccttccggttggtgaagta 766



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>emb|CR382378.12| Zebrafish DNA sequence from clone DKEYP-40G12 in linkage group 7,
              complete sequence
          Length = 198471

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     gaatgaaatgtgtacatttg 80
              ||||||||||||||||||||
Sbjct: 191288 gaatgaaatgtgtacatttg 191269



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>emb|AL354771.14| Human DNA sequence from clone RP11-545P21 on chromosome 1q25.1-31.1
            Contains part of the gene for DBCCR1-like (DBCCR1L) and
            part of a novel gene, complete sequence
          Length = 150195

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 94   ccaattattgcactgaacaataaa 117
            ||||||||||||||||| ||||||
Sbjct: 5120 ccaattattgcactgaaaaataaa 5097



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>emb|Y11794.1|ATP29A A.thaliana mRNA for peroxidase ATP29a, partial
          Length = 753

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 atgttccccatcttgatcat 290
           ||||||||||||||||||||
Sbjct: 314 atgttccccatcttgatcat 295



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>gb|BT008584.1| Arabidopsis thaliana clone U51349 putative peroxidase (At5g06730)
           mRNA, complete cds
          Length = 1108

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 atgttccccatcttgatcat 290
           ||||||||||||||||||||
Sbjct: 947 atgttccccatcttgatcat 928



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>emb|AL080157.1|HSM800674 Homo sapiens mRNA; cDNA DKFZp434K114 (from clone DKFZp434K114)
          Length = 2915

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 415 ttcaccttcaggttggtgaagtag 438
           ||||||||| ||||||||||||||
Sbjct: 674 ttcaccttccggttggtgaagtag 651



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>dbj|AK027745.1| Homo sapiens cDNA FLJ14839 fis, clone OVARC1001791
          Length = 2374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 415 ttcaccttcaggttggtgaagtag 438
           ||||||||| ||||||||||||||
Sbjct: 748 ttcaccttccggttggtgaagtag 725



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>dbj|AK139392.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830040L08 product:unclassifiable, full
            insert sequence
          Length = 2968

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    aacattgaaatgacttttta 27
            ||||||||||||||||||||
Sbjct: 1561 aacattgaaatgacttttta 1542



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>gb|AC011631.6|AC011631 Homo sapiens, clone RP11-1I20, complete sequence
          Length = 158236

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 94     ccaattattgcactgaacaataaa 117
              ||||||||||||||||| ||||||
Sbjct: 138517 ccaattattgcactgaaaaataaa 138540



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>emb|AL954370.3| Mouse DNA sequence from clone RP23-180P4 on chromosome 2, complete
             sequence
          Length = 61741

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   agatgccacacccacacttg 176
             ||||||||||||||||||||
Sbjct: 16795 agatgccacacccacacttg 16776



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 407      agccacggttcaccttcagg 426
                ||||||||||||||||||||
Sbjct: 24111101 agccacggttcaccttcagg 24111082



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>emb|BX831603.1|CNS0A10N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH18ZC08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1372

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 atgttccccatcttgatcat 290
           ||||||||||||||||||||
Sbjct: 993 atgttccccatcttgatcat 974



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>gb|BC035901.1| Homo sapiens WD repeat domain 21A, transcript variant 2, mRNA (cDNA
           clone MGC:46524 IMAGE:5241663), complete cds
          Length = 2360

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 415 ttcaccttcaggttggtgaagtag 438
           ||||||||| ||||||||||||||
Sbjct: 657 ttcaccttccggttggtgaagtag 634



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>gb|BC018979.2| Homo sapiens WD repeat domain 21A, transcript variant 1, mRNA (cDNA
           clone MGC:20547 IMAGE:3604168), complete cds
          Length = 2420

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 415 ttcaccttcaggttggtgaagtag 438
           ||||||||| ||||||||||||||
Sbjct: 715 ttcaccttccggttggtgaagtag 692



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>gb|AY088509.1| Arabidopsis thaliana clone 7360 mRNA, complete sequence
          Length = 1351

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  atgttccccatcttgatcat 290
            ||||||||||||||||||||
Sbjct: 1004 atgttccccatcttgatcat 985



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>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1710_H11
          Length = 136107

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 407   agccacggttcaccttcagg 426
             ||||||||||||||||||||
Sbjct: 44516 agccacggttcaccttcagg 44497



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>emb|BX005219.12| Mouse DNA sequence from clone RP23-343B19 on chromosome X, complete
             sequence
          Length = 83957

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aacattgaaatgacttttta 27
             ||||||||||||||||||||
Sbjct: 35157 aacattgaaatgacttttta 35138



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>dbj|AP002032.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPH15
          Length = 71277

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   atgttccccatcttgatcat 290
             ||||||||||||||||||||
Sbjct: 30590 atgttccccatcttgatcat 30609



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>dbj|AK118827.1| Arabidopsis thaliana At5g06730 mRNA for putative peroxidase, complete
            cds, clone: RAFL21-16-B10
          Length = 1296

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  atgttccccatcttgatcat 290
            ||||||||||||||||||||
Sbjct: 1010 atgttccccatcttgatcat 991



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>dbj|AK063147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-H03, full
           insert sequence
          Length = 770

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 407 agccacggttcaccttcagg 426
           ||||||||||||||||||||
Sbjct: 456 agccacggttcaccttcagg 437



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>tpe|BN000653.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx124 gene for
            class III peroxidase 124 precursor, exons 1-2
          Length = 6789

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  atgttccccatcttgatcat 290
            ||||||||||||||||||||
Sbjct: 6722 atgttccccatcttgatcat 6703



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>emb|BX247962.1|CNSLT1I5S human full-length cDNA clone CS0DA010YD24 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1587

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 415 ttcaccttcaggttggtgaagtag 438
           ||||||||| ||||||||||||||
Sbjct: 730 ttcaccttccggttggtgaagtag 707



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>dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21G09, TM0131,
             complete sequence
          Length = 93645

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 271   atgttccccatcttgatcatggaatttgcgaa 302
             |||||||||||| |||||||||| || |||||
Sbjct: 47755 atgttccccatcatgatcatggacttggcgaa 47724


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,591,029
Number of Sequences: 3902068
Number of extensions: 3591029
Number of successful extensions: 75368
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74941
Number of HSP's gapped (non-prelim): 427
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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