>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 212 SPHARLVWPFIIPYHV-FQYLQNEFGITVMTVTGQWVSVF 96
           SP  R   P  +PY+V F  L    G+TV+ VTG W+  +
Sbjct: 3   SPAGRTPAPGALPYYVAFSQL---LGLTVVAVTGAWLGAY 39

>RCNA_ECOL6 (Q8FFX9) Nickel/cobalt efflux system rcnA|
          Length = 274

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +1

Query: 118 VTVITVIPNSFCKYWKTW*GMIKGQTNRACGDHK*QRHSA*NHGD 252
           ++ + +I  +F  +W+TW G      N    DH+   H   +H D
Sbjct: 93  ISAVIIISTAFWMFWRTWRGERNWLENMHEHDHEHHHHDHEDHHD 137

>IBMP_CAMVW (Q05651) Inclusion body matrix protein (Viroplasmin)|
          Length = 520

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 53  LLHKMTQILQTWVKKKLTPTD 115
           LLHK  Q+++  V KKL PT+
Sbjct: 355 LLHKPRQVIEIGVSKKLVPTE 375

>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)|
          Length = 250

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -3

Query: 206 HARLVWPFIIPYHV-FQYLQNEFGITVMTVTGQWVSVF 96
           H+    P  +PY+V F  L    G+TV+ VTG W+ ++
Sbjct: 3   HSSASVPAALPYYVAFSQL---LGLTVVAVTGAWLGLY 37


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,174,935
Number of Sequences: 219361
Number of extensions: 832667
Number of successful extensions: 2460
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2460
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)