>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score = 90.1 bits (222), Expect(2) = 6e-38
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 310
           EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 385 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427



 Score = 86.3 bits (212), Expect(2) = 6e-38
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = -1

Query: 262 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 149
           GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF
Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 464

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score = 72.4 bits (176), Expect(2) = 8e-27
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = -2

Query: 435 YGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 310
           YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 396 YGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437



 Score = 66.6 bits (161), Expect(2) = 8e-27
 Identities = 30/40 (75%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -1

Query: 265 GGKGAQQ-GTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 149
           GG+ AQQ G +PVPEGCTD  A NYDPTARSDDGSC+Y F
Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVYKF 476

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score = 71.2 bits (173), Expect(2) = 8e-27
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 310
           EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 395 EYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437



 Score = 67.8 bits (164), Expect(2) = 8e-27
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 262 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYTF 149
           GKGAQQ  LPVPEGCTD  A+N+DPTARSDDG+C+Y F
Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVYNF 474

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score = 71.2 bits (173), Expect(2) = 1e-25
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 310
           EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 393 EYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435



 Score = 63.9 bits (154), Expect(2) = 1e-25
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -1

Query: 262 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLY 155
           GK AQQ +LPV +GCTD  AKNYDPTARSDDGSC Y
Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTY 470

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score = 78.6 bits (192), Expect = 6e-15
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 310
           EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 382 EYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score = 76.6 bits (187), Expect = 2e-14
 Identities = 35/43 (81%), Positives = 41/43 (95%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 310
           EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 385 EYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 35/43 (81%), Positives = 40/43 (93%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 310
           EYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 395 EYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 33/42 (78%), Positives = 40/42 (95%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 313
           EYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 391 EYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 32/41 (78%), Positives = 39/41 (95%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 316
           +YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 395 QYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 30/42 (71%), Positives = 41/42 (97%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 313
           +YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 397 QYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 316
           EYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 399 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score = 68.2 bits (165), Expect = 9e-12
 Identities = 31/42 (73%), Positives = 37/42 (88%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 313
           EYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 399 EYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score = 65.9 bits (159), Expect = 4e-11
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 322
           EYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 394 EYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score = 65.1 bits (157), Expect = 7e-11
 Identities = 29/41 (70%), Positives = 38/41 (92%)
 Frame = -2

Query: 435 YGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 313
           Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 400 YASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQLADTYMSQAAL 355
           +YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 367 KYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = -2

Query: 438 EYGHMLVQEQDNVKRVQL 385
           EYG+MLV EQ+NVKRV+L
Sbjct: 392 EYGNMLVMEQENVKRVKL 409

>TFE2_XENLA (Q01978) Transcription factor E2-alpha (Transcription factor|
           XE12/XE47)
          Length = 658

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
 Frame = -1

Query: 322 FLLRLENSPYTPTI--SCCIGGGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGS 164
           F L + N    PT   S   GGG G ++ T   P G  D N   +D      DG+
Sbjct: 26  FPLPVANGKTRPTTLASTQFGGGSGLEERTGSAPWGTEDHNGSTFDQGRGYGDGT 80

>LAMA5_HUMAN (O15230) Laminin alpha-5 chain precursor|
          Length = 3695

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 166  CRRRSLPLGRSSWHFGRCNLP 228
            CRR   P GR   H GRCN P
Sbjct: 2114 CRRCQCPGGRCDPHTGRCNCP 2134

>CORIN_HUMAN (Q9Y5Q5) Atrial natriuteric peptide-converting enzyme (EC 3.4.21.-)|
           (pro-ANP-converting enzyme) (Corin) (Heart-specific
           serine proteinase ATC2) (Transmembrane protease, serine
           10)
          Length = 1042

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +1

Query: 280 RWWVCMENFLTVEGTSLHRILVSITQSCLAHVGVSKLHT 396
           RW     N+ ++ GT+LH +LV+  QSC +   +S L T
Sbjct: 749 RWLTLHSNWESLNGTTLHELLVN-GQSCESRSKISLLCT 786


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,803,877
Number of Sequences: 219361
Number of extensions: 1312214
Number of successful extensions: 3370
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 3277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3369
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)