| Clone Name | rbaet113e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 286 ccctgctcacgacgacgccgccgacgacgacgt 318 ||||| ||||||||||||||||||||||||||| Sbjct: 33140 ccctgatcacgacgacgccgccgacgacgacgt 33172
>emb|X58924.1|HVRPL11E H.volcanii genes for ribosomal proteins L11e, L1e, L10e and L12e Length = 3450 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||||||||||||||||||||||| Sbjct: 2889 acgacgacgccgccgacgacgacg 2912
>ref|XM_464323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2028 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 295 cgacgacgccgccgacgacgacg 317 ||||||||||||||||||||||| Sbjct: 639 cgacgacgccgccgacgacgacg 661
>gb|DQ145235.1| Drosophila miranda neo-Y dpld gene, partial sequence Length = 1287 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Plus Query: 221 tggtgtcggtgtcggtggcggtg 243 ||||||||||||||||||||||| Sbjct: 1103 tggtgtcggtgtcggtggcggtg 1125 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 ggtgtcggtgtcggtggcggtg 243 |||||||||||||||||||||| Sbjct: 1128 ggtgtcggtgtcggtggcggtg 1149
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtggccg 323 ||||||||||||||||||||||| Sbjct: 2399025 cgccgccgacgacgacgtggccg 2399003 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtggcc 322 |||||||||||||||||||||| Sbjct: 23931753 cgccgccgacgacgacgtggcc 23931732 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 29571350 cgacgccgccgacgacgacg 29571331 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 290 gctcacgacgacgccgccgacgacgacg 317 ||||||| || ||||||||||||||||| Sbjct: 29240011 gctcacgccgccgccgccgacgacgacg 29240038 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 25844007 cgacgccgccgacgacgacg 25844026
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 295 cgacgacgccgccgacgacgacg 317 ||||||||||||||||||||||| Sbjct: 4115215 cgacgacgccgccgacgacgacg 4115193 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacgtggccgag 325 ||||||||||| |||||||| ||||||| Sbjct: 33823658 cgacgccgccgccgacgacgaggccgag 33823631
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtggccg 323 ||||||||||||||||||||||| Sbjct: 30483 cgccgccgacgacgacgtggccg 30461
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtggccg 323 ||||||||||||||||||||||| Sbjct: 120826 cgccgccgacgacgacgtggccg 120804
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 295 cgacgacgccgccgacgacgacg 317 ||||||||||||||||||||||| Sbjct: 25229 cgacgacgccgccgacgacgacg 25207
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 295 cgacgacgccgccgacgacgacg 317 ||||||||||||||||||||||| Sbjct: 161881 cgacgacgccgccgacgacgacg 161859
>ref|NM_188644.1| Oryza sativa (japonica cultivar-group), Ozsa8247 predicted mRNA Length = 1554 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 cttcgtcgacgccgccgccggcttct 359 |||||||| ||||||||||||||||| Sbjct: 1500 cttcgtcggcgccgccgccggcttct 1475
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 tcttcgtcgacgccgccgccgg 354 |||||||||||||||||||||| Sbjct: 465385 tcttcgtcgacgccgccgccgg 465406 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acgacgccgccgacgacgac 316 |||||||||||||||||||| Sbjct: 2370824 acgacgccgccgacgacgac 2370805
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 333 tcttcgtcgacgccgccgccggcttc 358 ||||||||||||| |||||||||||| Sbjct: 1882376 tcttcgtcgacgcggccgccggcttc 1882351
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 tcttcgtcgacgccgccgccgg 354 |||||||||||||||||||||| Sbjct: 123389 tcttcgtcgacgccgccgccgg 123410
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 ggtgtcggtgtcggtggcggtg 243 |||||||||||||||||||||| Sbjct: 2570835 ggtgtcggtgtcggtggcggtg 2570814 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||||||||||||||| ||||| Sbjct: 2570861 ttggtgtcggtgtcggtgtcggtg 2570838
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 333 tcttcgtcgacgccgccgccgg 354 |||||||||||||||||||||| Sbjct: 123313 tcttcgtcgacgccgccgccgg 123334
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 ggtgtcggtgtcggtggcggtg 243 |||||||||||||||||||||| Sbjct: 3757951 ggtgtcggtgtcggtggcggtg 3757930 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||||||||||||||| ||||| Sbjct: 4285594 ttggtgtcggtgtcggtgtcggtg 4285571
>gb|AY242058.1| Oryza sativa (japonica cultivar-group) MONOCULM 1 (MOC1) gene, complete cds Length = 3176 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtggcc 322 |||||||||||||||||||||| Sbjct: 1883 cgccgccgacgacgacgtggcc 1862
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 cttcgtcgacgccgccgccggcttct 359 |||||||| ||||||||||||||||| Sbjct: 7403011 cttcgtcggcgccgccgccggcttct 7402986 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gccgccgacgacgacgtggccgagc 326 |||||||||||||||| |||||||| Sbjct: 19976881 gccgccgacgacgacgaggccgagc 19976905 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 acgacgacgccgccgacgacgacg 317 |||||| ||||||||||||||||| Sbjct: 37269485 acgacgccgccgccgacgacgacg 37269462 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 cgccgacgacgacgtggccgagcc 327 ||||||||||| |||||||||||| Sbjct: 32264708 cgccgacgacgccgtggccgagcc 32264731 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 11893361 cgacgccgccgacgacgacg 11893380 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gacgacgccgccgacgacga 315 |||||||||||||||||||| Sbjct: 7903501 gacgacgccgccgacgacga 7903520
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 cttcgtcgacgccgccgccggcttct 359 |||||||| ||||||||||||||||| Sbjct: 64039 cttcgtcggcgccgccgccggcttct 64014
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacgtggccg 323 ||||| |||||||||||||||||||| Sbjct: 3167959 cgacgtcgccgacgacgacgtggccg 3167934 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 cgccgacgacgacgtggccgagcc 327 ||||||||||||| |||||||||| Sbjct: 4034486 cgccgacgacgacatggccgagcc 4034463
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtggcc 322 |||||||||||||||||||||| Sbjct: 61364 cgccgccgacgacgacgtggcc 61343
>dbj|AK069983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037H09, full insert sequence Length = 2068 Score = 44.1 bits (22), Expect = 0.34 Identities = 25/26 (96%) Strand = Plus / Minus Query: 334 cttcgtcgacgccgccgccggcttct 359 |||||||| ||||||||||||||||| Sbjct: 1766 cttcgtcggcgccgccgccggcttct 1741
>gb|AF057184.1|AF057184 Zea mays trypsin inhibitor mRNA, complete cds Length = 767 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 222 ggtgtcggtgtcggtggcggtg 243 |||||||||||||||||||||| Sbjct: 204 ggtgtcggtgtcggtggcggtg 183
>ref|XM_480146.1| Oryza sativa (japonica cultivar-group), mRNA Length = 744 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 295 cgacgacgccgccgacgacgacgtggccg 323 ||||| |||||||||||||| |||||||| Sbjct: 337 cgacgccgccgccgacgacggcgtggccg 309
>gb|AY656247.1| Oryza sativa (japonica cultivar-group) 17.7 kDa low temperature induced protein mRNA, complete cds Length = 1043 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cacgacgacgccgccgacgacgacg 317 ||||||| ||||||||||||||||| Sbjct: 328 cacgacgccgccgccgacgacgacg 352
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cacgacgacgccgccgacgacgacg 317 ||||||| ||||||||||||||||| Sbjct: 13258173 cacgacgccgccgccgacgacgacg 13258197 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 tcttcttcgtcgacgccgccgccg 353 |||||||||||| ||||||||||| Sbjct: 5325473 tcttcttcgtcgtcgccgccgccg 5325450
>gb|AC162307.5| Mus musculus BAC clone RP23-271I2 from chromosome 18, complete sequence Length = 196879 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 ggaaaagaagccatctttctt 25 ||||||||||||||||||||| Sbjct: 82397 ggaaaagaagccatctttctt 82377
>dbj|AB110172.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 13YPB022 Length = 943 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cacgacgacgccgccgacgacgacg 317 ||||||| ||||||||||||||||| Sbjct: 273 cacgacgccgccgccgacgacgacg 297
>gb|AE012162.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 70 of 460 of the complete genome Length = 11262 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 ccgccggcttcttgctggtgctggt 372 ||||||||||| ||||||||||||| Sbjct: 997 ccgccggcttcgtgctggtgctggt 973
>gb|AF501618.1| Nectria haematococca mpVI cutinase transcription factor 1 alpha (CTF1 alpha) gene, complete cds Length = 4444 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 221 tggtgtcggtgtcggtggcggtgct 245 ||||||||||||||||| ||||||| Sbjct: 764 tggtgtcggtgtcggtgtcggtgct 788
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 ccgccggcttcttgctggtgctggt 372 ||||||||||| ||||||||||||| Sbjct: 4275823 ccgccggcttcgtgctggtgctggt 4275847
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 cgacgacgccgccgacgacgacgtggccg 323 ||||| |||||||||||||| |||||||| Sbjct: 3083107 cgacgccgccgccgacgacggcgtggccg 3083135 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 851583 cgacgccgccgacgacgacg 851602
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cacgacgacgccgccgacgacgacg 317 ||||||| ||||||||||||||||| Sbjct: 13254948 cacgacgccgccgccgacgacgacg 13254972 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 tcttcttcgtcgacgccgccgccg 353 |||||||||||| ||||||||||| Sbjct: 5324688 tcttcttcgtcgtcgccgccgccg 5324665
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 gccgccgacgacgacgtggccgagc 326 |||||||||||||||| |||||||| Sbjct: 79790 gccgccgacgacgacgaggccgagc 79814
>ref|XM_342745.2| PREDICTED: Rattus norvegicus zinc finger protein 1 (AZF1), mRNA Length = 1560 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 gctggccgggcgctggctggt 279 ||||||||||||||||||||| Sbjct: 328 gctggccgggcgctggctggt 308
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 cgacgacgccgccgacgacgacgtggccg 323 ||||| |||||||||||||| |||||||| Sbjct: 133830 cgacgccgccgccgacgacggcgtggccg 133858
>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1066_B03 Length = 115339 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 cgacgacgccgccgacgacgacgtggccg 323 ||||| |||||||||||||| |||||||| Sbjct: 42591 cgacgccgccgccgacgacggcgtggccg 42619
>dbj|AK068753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158E09, full insert sequence Length = 1292 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cacgacgacgccgccgacgacgacg 317 ||||||| ||||||||||||||||| Sbjct: 503 cacgacgccgccgccgacgacgacg 527
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtggccgag 325 |||||||||||| |||||||||||| Sbjct: 1900886 cgccgccgacgatgacgtggccgag 1900862
>dbj|AK062176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D01, full insert sequence Length = 994 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 293 cacgacgacgccgccgacgacgacg 317 ||||||| ||||||||||||||||| Sbjct: 313 cacgacgccgccgccgacgacgacg 337
>gb|AC107773.9| Mus musculus chromosome 18, clone RP23-102H15, complete sequence Length = 250096 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 ggaaaagaagccatctttctt 25 ||||||||||||||||||||| Sbjct: 235131 ggaaaagaagccatctttctt 235111
>gb|L05934.1|MZECAT3GN Zea mays catalase (Cat3) gene, complete cds Length = 6041 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacgt 318 |||||| |||||||||||||||||| Sbjct: 5366 acgacgccgccgccgacgacgacgt 5390
>gb|AC136284.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1739D07, from chromosome 3, complete sequence Length = 149539 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 293 cacgacgacgccgccgacgacgacg 317 ||||||| ||||||||||||||||| Sbjct: 61668 cacgacgccgccgccgacgacgacg 61644
>gb|BC063598.1| Homo sapiens degenerative spermatocyte homolog 2, lipid desaturase (Drosophila), mRNA (cDNA clone MGC:75497 IMAGE:4775939), complete cds Length = 1434 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cgcgggctggccgggcgctggctg 277 |||||||||||| ||||||||||| Sbjct: 219 cgcgggctggcctggcgctggctg 242
>ref|NM_100948.2| Arabidopsis thaliana unknown protein AT1G10720 mRNA, complete cds Length = 1615 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||| ||||||||||||||||||| Sbjct: 56 acgatgacgccgccgacgacgacg 79
>ref|XM_510161.1| PREDICTED: Pan troglodytes similar to sphingolipid C4-hydroxylase/delta 4-desaturase protein DES2 (LOC453157), mRNA Length = 1495 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cgcgggctggccgggcgctggctg 277 |||||||||||| ||||||||||| Sbjct: 215 cgcgggctggcctggcgctggctg 238
>ref|XM_479779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 1115 cgacgccgccgacgacgacg 1134
>ref|XM_475740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 450 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 54 cgacgccgccgacgacgacg 73
>ref|XM_475190.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 acgacgacgccgccgacgacgacg 317 |||||||||||| ||||||||||| Sbjct: 76 acgacgacgccgacgacgacgacg 53
>ref|XM_468250.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1309 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacgtggccgag 325 ||||||||||| |||||||| ||||||| Sbjct: 147 cgacgccgccgccgacgacgaggccgag 120
>ref|NM_190705.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 903 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||||| ||||||||||||||||| Sbjct: 815 acgacgccgccgccgacgacgacg 838
>ref|NM_191377.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 cgccgacgacgacgtggccgagcc 327 ||||||||||| |||||||||||| Sbjct: 607 cgccgacgacgccgtggccgagcc 584
>gb|U15422.1|HSU15422 Homo sapiens protamine 1 (PRM1), protamine 2 (PRM2), and transition protein 2 (TNP2) genes, complete cds Length = 40573 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 27154 ggctggccgggctctggctggagctctg 27127
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||||||||||||||| ||||| Sbjct: 1594110 ttggtgtcggtgtcggtgtcggtg 1594087
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gacgccgccgccggcttctt 360 |||||||||||||||||||| Sbjct: 62163 gacgccgccgccggcttctt 62182
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07, complete sequence Length = 157463 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtgg 320 |||||||||||||||||||| Sbjct: 66425 cgccgccgacgacgacgtgg 66406
>ref|XM_952296.1| Neurospora crassa OR74A hypothetical protein (NCU07164.1) partial mRNA Length = 510 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||| ||||||||||||||||| Sbjct: 173 ttggtgacggtgtcggtggcggtg 150
>ref|XM_327449.1| Neurospora crassa OR74A hypothetical protein (NCU07164.1) partial mRNA Length = 510 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||| ||||||||||||||||| Sbjct: 173 ttggtgacggtgtcggtggcggtg 150
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 10771 cgacgccgccgacgacgacg 10790
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||||||||||||||| ||||| Sbjct: 2840696 ttggtgtcggtgtcggtgtcggtg 2840673
>gb|AY615199.1| Triticum aestivum transcription factor Myb2 (Myb2) mRNA, complete cds Length = 1044 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 cgccgccgccggcttcttgc 362 |||||||||||||||||||| Sbjct: 484 cgccgccgccggcttcttgc 465
>ref|NM_005425.4| Homo sapiens transition protein 2 (during histone to protamine replacement) (TNP2), mRNA Length = 599 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 207 ggctggccgggctctggctggagctctg 180
>gb|AY541700.1| Homo sapiens sphingolipid C4-hydroxylase/delta 4-desaturase protein DES2 mRNA, complete cds Length = 1000 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cgcgggctggccgggcgctggctg 277 |||||||||||| ||||||||||| Sbjct: 192 cgcgggctggcctggcgctggctg 215
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 77063 cgacgccgccgacgacgacg 77082
>gb|AY190952.1| Drosophila virilis clone DVIF01_45_G15 (D1418) genomic sequence Length = 39016 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 25761 cgacgccgccgacgacgacg 25780
>gb|AF142435.1| Frankia sp. ACN14a/ts-r 20S proteasome beta-subunit precursor (prcB) and 20S proteasome alpha-subunit (prcA) genes, complete cds; putative dienelactone hydrolase-like protein gene, partial cds; and unknown genes Length = 4725 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 acgacgccgccgacgacgac 316 |||||||||||||||||||| Sbjct: 3511 acgacgccgccgacgacgac 3530
>emb|Z46940.2|HSPRMTNP2 Homo sapiens PRM1, PRM2, PRM3, TNP2 and SOCS-1 genes Length = 28535 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 13836 ggctggccgggctctggctggagctctg 13809
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tctgccctgctcacgacgac 301 |||||||||||||||||||| Sbjct: 53990 tctgccctgctcacgacgac 54009
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 tcttcttcgtcgacgccgccgccg 353 |||||||||||| ||||||||||| Sbjct: 31641 tcttcttcgtcgtcgccgccgccg 31618
>emb|AL442064.10| Human DNA sequence from clone RP11-272D1 on chromosome 9 Contains the 3' end of the EDG2 gene for endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2, complete sequence Length = 169905 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aagttgatgcctccaagaat 197 |||||||||||||||||||| Sbjct: 12699 aagttgatgcctccaagaat 12718
>emb|AL157881.14| Human DNA sequence from clone RP11-104M22 on chromosome 9q31.1-32 Contains the 3' end of the MUSK gene for muscle, skeletal, receptor tyrosine kinase and the 3' end of the EDG2 gene for endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2, complete sequence Length = 162726 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aagttgatgcctccaagaat 197 |||||||||||||||||||| Sbjct: 96075 aagttgatgcctccaagaat 96094
>gb|AY305865.1| Oryza sativa (japonica cultivar-group) C2H2 type zinc finger transcription factor ZFP16 (ZFP16) mRNA, complete cds Length = 627 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 295 cgacgacgccgccgacgacgacgt 318 ||||||||||| |||||||||||| Sbjct: 498 cgacgacgccggcgacgacgacgt 521
>ref|XM_782201.1| PREDICTED: Strongylocentrotus purpuratus similar to sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 (LOC582241), mRNA Length = 2117 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cgacgacgccgccgacgacg 314 |||||||||||||||||||| Sbjct: 172 cgacgacgccgccgacgacg 153
>emb|X99973.1|HVMYB4TRF H.vulgare mRNA for myb4 transcription factor Length = 1180 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 cgccgccgccggcttcttgc 362 |||||||||||||||||||| Sbjct: 413 cgccgccgccggcttcttgc 394
>gb|AY117306.1| Arabidopsis thaliana unknown protein (At1g10720) mRNA, complete cds Length = 1321 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||| ||||||||||||||||||| Sbjct: 44 acgatgacgccgccgacgacgacg 67
>gb|AY074279.1| Arabidopsis thaliana unknown protein (At1g10720) mRNA, complete cds Length = 1595 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||| ||||||||||||||||||| Sbjct: 55 acgatgacgccgccgacgacgacg 78
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 1562469 cgacgccgccgacgacgacg 1562488
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acgacgccgccgacgacgac 316 |||||||||||||||||||| Sbjct: 291213 acgacgccgccgacgacgac 291194
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acgacgccgccgacgacgac 316 |||||||||||||||||||| Sbjct: 145398 acgacgccgccgacgacgac 145379
>emb|BX294028.1|NC103E1 Neurospora crassa DNA linkage group V Cosmid contig 103E1 Length = 87435 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||| ||||||||||||||||| Sbjct: 56179 ttggtgacggtgtcggtggcggtg 56202
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 155829 cgacgccgccgacgacgacg 155810
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tcgtcgacgccgccgccggc 355 |||||||||||||||||||| Sbjct: 28314 tcgtcgacgccgccgccggc 28295
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ctcgcgggctggccgggcgc 271 |||||||||||||||||||| Sbjct: 157519 ctcgcgggctggccgggcgc 157538
>emb|AL807371.1|NC5F3 Neurospora crassa DNA linkage group V cosmid contig 5F3 Length = 83192 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||||||||||| ||||||||||| Sbjct: 67583 acgacgacgccgacgacgacgacg 67606
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 ||||||||| |||||||||||||| Sbjct: 37464 acgacgacggcgccgacgacgacg 37487
>gb|BC096137.1| Homo sapiens transition protein 2 (during histone to protamine replacement), mRNA (cDNA clone MGC:116785 IMAGE:40002553), complete cds Length = 467 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 185 ggctggccgggctctggctggagctctg 158
>gb|BC096136.1| Homo sapiens transition protein 2 (during histone to protamine replacement), mRNA (cDNA clone MGC:116783 IMAGE:40002550), complete cds Length = 467 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 185 ggctggccgggctctggctggagctctg 158
>gb|BC096135.1| Homo sapiens transition protein 2 (during histone to protamine replacement), mRNA (cDNA clone MGC:116782 IMAGE:40002547), complete cds Length = 467 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 185 ggctggccgggctctggctggagctctg 158
>gb|AC009121.8| Homo sapiens chromosome 16 clone RP11-485G7, complete sequence Length = 131487 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 94906 ggctggccgggctctggctggagctctg 94879
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cggtgtcggtggcggtgctc 246 |||||||||||||||||||| Sbjct: 16477 cggtgtcggtggcggtgctc 16496
>dbj|AB252147.1| Triticum aestivum Tamyb7 mRNA for myb-related protein, complete cds Length = 876 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 cgccgccgccggcttcttgc 362 |||||||||||||||||||| Sbjct: 430 cgccgccgccggcttcttgc 411
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 302 gccgccgacgacgacgtggccgag 325 ||||||||||| |||||||||||| Sbjct: 1720485 gccgccgacgaggacgtggccgag 1720508
>dbj|AB182402.1| Ceratina flavipes DNA, microsatellite locus Cera92 Length = 100 Score = 40.1 bits (20), Expect = 5.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 294 acgacgacgccgccgacgacgacgtggccgag 325 ||||||||| || |||||||||||||| |||| Sbjct: 81 acgacgacgacgacgacgacgacgtggacgag 50
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||||||||||||||| ||||| Sbjct: 981068 ttggtgtcggtgtcggtgtcggtg 981045
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acgacgccgccgacgacgac 316 |||||||||||||||||||| Sbjct: 3100414 acgacgccgccgacgacgac 3100395 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||||||||||||||| ||||| Sbjct: 2016073 ttggtgtcggtgtcggtgtcggtg 2016050
>gb|AC092242.1|AC092242 Drosophila melanogaster, chromosome 2L, region 24E-24F, BAC clone BACR09F08, complete sequence Length = 111023 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgctctgccctgctcacgac 298 |||||||||||||||||||| Sbjct: 37459 tgctctgccctgctcacgac 37440
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 acgacgacgccgccgacgacgacg 317 ||||||||||| |||||||||||| Sbjct: 768960 acgacgacgccaccgacgacgacg 768937
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 ||||||||| |||||||||||||| Sbjct: 241644 acgacgacggcgccgacgacgacg 241667
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 24219593 cgacgccgccgacgacgacg 24219612
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtgg 320 |||||||||||||||||||| Sbjct: 17472411 cgccgccgacgacgacgtgg 17472392
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 tcgacgccgccgccggcttc 358 |||||||||||||||||||| Sbjct: 17046235 tcgacgccgccgccggcttc 17046216
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 26159723 cgacgccgccgacgacgacg 26159742 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||||||||||| ||||||||||| Sbjct: 18798454 acgacgacgccgacgacgacgacg 18798477 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gacgccgccgccggcttctt 360 |||||||||||||||||||| Sbjct: 4967578 gacgccgccgccggcttctt 4967597
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 580 cgacgccgccgacgacgacg 561
>emb|BX950360.1| Gallus gallus finished cDNA, clone ChEST255o8 Length = 997 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 ggtgtcggtgtcggtggcggtgct 245 |||||||||||||||| ||||||| Sbjct: 79 ggtgtcggtgtcggtgccggtgct 56
>gb|AC007354.3|T16B5 Arabidopsis thaliana chromosome 1 BAC T16B5 sequence, complete sequence Length = 70116 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 acgacgacgccgccgacgacgacg 317 |||| ||||||||||||||||||| Sbjct: 51980 acgatgacgccgccgacgacgacg 51957
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 tcttcttcgtcgacgccgccgccg 353 |||||||||||| ||||||||||| Sbjct: 46580 tcttcttcgtcgtcgccgccgccg 46557
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 cgccgacgacgacgtggccgagcc 327 ||||||||||| |||||||||||| Sbjct: 135461 cgccgacgacgccgtggccgagcc 135484
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 tcgacgccgccgccggcttc 358 |||||||||||||||||||| Sbjct: 86727 tcgacgccgccgccggcttc 86708
>gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis thaliana BAC F20B24 from chromosome I, complete sequence Length = 99416 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||| ||||||||||||||||||| Sbjct: 63211 acgatgacgccgccgacgacgacg 63234
>ref|NM_206918.1| Homo sapiens degenerative spermatocyte homolog 2, lipid desaturase (Drosophila) (DEGS2), mRNA Length = 1434 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cgcgggctggccgggcgctggctg 277 |||||||||||| ||||||||||| Sbjct: 219 cgcgggctggcctggcgctggctg 242
>gb|AY086831.1| Arabidopsis thaliana clone 28214 mRNA, complete sequence Length = 1565 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||| ||||||||||||||||||| Sbjct: 56 acgatgacgccgccgacgacgacg 79
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tttggcgatcttgatgtcga 398 |||||||||||||||||||| Sbjct: 89022 tttggcgatcttgatgtcga 89003
>gb|AY186999.1| Drosophila virilis unc-5 (unc-5) gene, partial cds; and ap (ap), vlc (vlc), CG17337 (CG17337), and CG13533 (CG13533) genes, complete cds Length = 83253 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 35691 cgacgccgccgacgacgacg 35710 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 ||||||||| |||||||||||||| Sbjct: 13293 acgacgacgacgccgacgacgacg 13316
>dbj|AP003794.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0489B03 Length = 150381 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 acgacgacgccgccgacgacgacg 317 |||||| ||||||||||||||||| Sbjct: 144141 acgacgccgccgccgacgacgacg 144118
>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0679C12 Length = 153666 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 acgacgacgccgccgacgacgacg 317 |||||| ||||||||||||||||| Sbjct: 106474 acgacgccgccgccgacgacgacg 106451
>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1066G12 Length = 136263 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gacgacgccgccgacgacga 315 |||||||||||||||||||| Sbjct: 98447 gacgacgccgccgacgacga 98466
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gacgacgccgccgacgacga 315 |||||||||||||||||||| Sbjct: 9813 gacgacgccgccgacgacga 9832
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 14935 cgacgccgccgacgacgacg 14916
>dbj|AB167396.1| Oryza sativa (japonica cultivar-group) UXS-2 mRNA for UDP-glucuronic acid decarboxylase, complete cds Length = 1336 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 308 cgacgccgccgacgacgacg 289
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 290 gctcacgacgacgccgccgacgacgacg 317 ||||||| || ||||||||||||||||| Sbjct: 2809 gctcacgccgccgccgccgacgacgacg 2836
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 135856 cgacgccgccgacgacgacg 135837
>dbj|AP003535.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1012D10 Length = 168267 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 105646 cgacgccgccgacgacgacg 105665
>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0416A11 Length = 171519 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 126211 cgacgccgccgacgacgacg 126230
>dbj|AP004562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470F10 Length = 185294 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 14321 cgacgccgccgacgacgacg 14340
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacgtggccgag 325 ||||||||||| |||||||| ||||||| Sbjct: 40236 cgacgccgccgccgacgacgaggccgag 40209
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 150803 cgacgccgccgacgacgacg 150822
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 574 cgacgccgccgacgacgacg 555
>dbj|AK120442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098O22, full insert sequence Length = 684 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 123 cgacgccgccgacgacgacg 142
>gb|AF215715.1|AF215715 Homo sapiens transitional protein 2 (TNP2) gene, exon 1 and partial cds Length = 584 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 213 ggctggccgggctctggctggagctctg 186
>ref|XM_312537.2| Anopheles gambiae str. PEST ENSANGP00000014292 (ENSANGG00000011803), partial mRNA Length = 1153 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 293 cacgacgacgccgccgacgacgacgtgg 320 |||||||||| || |||||||||||||| Sbjct: 13 cacgacgacgacgacgacgacgacgtgg 40
>dbj|AK110629.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-B07, full insert sequence Length = 922 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 ||||||||| |||||||||||||| Sbjct: 638 acgacgacggcgccgacgacgacg 661
>dbj|AK109860.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-G11, full insert sequence Length = 1425 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 1115 cgacgccgccgacgacgacg 1134
>dbj|AK106456.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-F12, full insert sequence Length = 1593 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacgtggccgag 325 ||||||||||| |||||||| ||||||| Sbjct: 1349 cgacgccgccgccgacgacgaggccgag 1376
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 290 gctcacgacgacgccgccgacgacgacg 317 ||||||| || ||||||||||||||||| Sbjct: 982 gctcacgccgccgccgccgacgacgacg 1009
>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full insert sequence Length = 1338 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 552 cgacgccgccgacgacgacg 571
>dbj|AK102831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109G07, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 60 cgacgccgccgacgacgacg 41
>dbj|AK101168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I19, full insert sequence Length = 1820 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 435 cgacgccgccgacgacgacg 416
>dbj|AK071317.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084C07, full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 330 tcttcttcgtcgacgccgccgccg 353 |||||||||||| ||||||||||| Sbjct: 93 tcttcttcgtcgtcgccgccgccg 116
>dbj|AK069754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028G22, full insert sequence Length = 1232 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||||| ||||||||||||||||| Sbjct: 761 acgacgccgccgccgacgacgacg 784
>dbj|AK064384.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-E04, full insert sequence Length = 1353 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 87 cgacgccgccgacgacgacg 68
>dbj|AK059349.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-C08, full insert sequence Length = 1309 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 298 cgacgccgccgacgacgacgtggccgag 325 ||||||||||| |||||||| ||||||| Sbjct: 147 cgacgccgccgccgacgacgaggccgag 120
>gb|AE003577.4| Drosophila melanogaster chromosome 2L, section 14 of 83 of the complete sequence Length = 290034 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgctctgccctgctcacgac 298 |||||||||||||||||||| Sbjct: 258655 tgctctgccctgctcacgac 258636
>emb|AL133523.5|CNS01DVB Human chromosome 14 DNA sequence BAC R-775G15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173039 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 cgcgggctggccgggcgctggctg 277 |||||||||||| ||||||||||| Sbjct: 87134 cgcgggctggcctggcgctggctg 87111
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 220 ttggtgtcggtgtcggtggcggtg 243 |||||||||||||||||| ||||| Sbjct: 4292366 ttggtgtcggtgtcggtgtcggtg 4292343
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acgacgccgccgacgacgac 316 |||||||||||||||||||| Sbjct: 2014654 acgacgccgccgacgacgac 2014635
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 tgtcggtgtcggtggcggtgctcc 247 |||||| ||||||||||||||||| Sbjct: 2606858 tgtcggcgtcggtggcggtgctcc 2606835
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 tcgacgccgccgccggcttc 358 |||||||||||||||||||| Sbjct: 17055275 tcgacgccgccgccggcttc 17055256
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 cgccgccgacgacgacgtgg 320 |||||||||||||||||||| Sbjct: 17566121 cgccgccgacgacgacgtgg 17566102
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 24147799 cgacgccgccgacgacgacg 24147818
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 cgacgccgccgacgacgacg 317 |||||||||||||||||||| Sbjct: 104284 cgacgccgccgacgacgacg 104303
>gb|AC005270.1|AC005270 Drosophila melanogaster DNA sequence (P1s DS00830 (D77) and DS04830 (D98)), complete sequence Length = 132666 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgctctgccctgctcacgac 298 |||||||||||||||||||| Sbjct: 32049 tgctctgccctgctcacgac 32030
>gb|AD000004.1|MSGY224 Mycobacterium tuberculosis sequence from clone y224 Length = 40051 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cgacgacgccgccgacgacg 314 |||||||||||||||||||| Sbjct: 17289 cgacgacgccgccgacgacg 17308
>gb|L03378.1|HUMTNP2SS Homo sapiens transition protein 2 (TNP2) gene, complete cds Length = 1782 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 423 ggctggccgggctctggctggagctctg 396
>gb|AC105258.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_G07, complete sequence Length = 71145 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 294 acgacgacgccgccgacgacgacg 317 |||||||||||| ||||||||||| Sbjct: 20820 acgacgacgccgacgacgacgacg 20843
>emb|X63759.1|HSHTNP2D H.sapiens hTNP2 gene for transition protein 2 Length = 1776 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 434 ggctggccgggctctggctggagctctg 407
>emb|X63758.1|HSHTNP2R H.sapiens mRNA (hTNP 2) for transition protein 2 Length = 531 Score = 40.1 bits (20), Expect = 5.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 258 ggctggccgggcgctggctggtgctctg 285 |||||||||||| |||||||| |||||| Sbjct: 166 ggctggccgggctctggctggagctctg 139
>dbj|AP005229.2| Homo sapiens genomic DNA, chromosome 18, clone:RP11-128P17, complete sequence Length = 129326 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cttgctgttcaattcccacc 127 |||||||||||||||||||| Sbjct: 110036 cttgctgttcaattcccacc 110055 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,317,850 Number of Sequences: 3902068 Number of extensions: 4317850 Number of successful extensions: 132232 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 169 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 126743 Number of HSP's gapped (non-prelim): 5441 length of query: 398 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 376 effective length of database: 17,147,199,772 effective search space: 6447347114272 effective search space used: 6447347114272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)