ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet113d04 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 523 bits (264), Expect = e-145 Identities = 383/419 (91%), Gaps = 14/419 (3%) Strand = Plus / Minus Query: 11 acattcatgggggatcaatatcatgagctggtgagcaagaaatgataacagaagctaaaa 70 ||||||||||||||||||||||||||| || ||| |||||| |||||||||||||||| Sbjct: 1200 acattcatgggggatcaatatcatgagtaggcgaggaagaaacaataacagaagctaaaa 1141 Query: 71 tataaaccgatcactctggtttta---tactagatacacacacaaacaca--ttgttgcc 125 |||||||||| ||| |||| |||| |||||||||||||||| |||||| |||||||| Sbjct: 1140 tataaaccga-caccctgggtttagattactagatacacacaccaacacacattgttgcc 1082 Query: 126 tcgattctttcctctccaccgaccaacccacgtatgcatgcacaaaagat--gagtatct 183 |||||| ||||||||||||||| ||||||||||| ||||||||| ||||| || ||| Sbjct: 1081 tcgattgtttcctctccaccgatcaacccacgtacgcatgcacacaagataggatcttct 1022 Query: 184 tcacttctgctatgctctagttagactcgagctgcgcgtaccacacaccctggatattga 243 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1021 tcacttctgctctgctctagttagactcgagctgcgcgtaccacacaccctggatcttga 962 Query: 244 catccttgggcgccttggcgccgaggtcggtgtctgacggctgcacgctctcgaagacgc 303 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 961 catccttgggcgcct------cgaggtcggtgtctgacggctgcacgctctcgaagacgc 908 Query: 304 ctatcacctcgccggtctccggcttgctcttggtcacgctgagggtgatgttgcccgtgg 363 | |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 907 cgatcacctcgccggtctccggcttgctcttggtgacgctgagcgtgatgttgcccgtgg 848 Query: 364 aggaggacgcgttcttcacgttctccttggccagctcctcctcgtctcctctgcctccg 422 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 847 aggaggacgcgttcttcacgttctccttggccaactcctcctcgtctcctctgcctccg 789
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1000 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 941 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 940 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 881 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 880 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 821 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 820 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 772
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 17346636 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 17346577 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 17346576 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 17346517 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 17346516 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 17346457 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 17346456 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 17346408
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 112897 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 112838 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 112837 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 112778 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 112777 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 112718 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 112717 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 112669
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1065 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1006 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1005 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 946 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 945 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 886 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 885 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 837
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 892 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 844
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1072 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1013 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1012 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 953 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 952 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 893 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 892 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 844
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 841
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 869 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 821
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1049 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 990 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 989 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 930 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 929 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 870 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 869 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 821
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 841
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1052 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 993 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 992 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 933 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 932 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 873 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 872 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 824
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1074 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1015 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1014 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 955 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 954 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 895 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 894 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 846
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 295 bits (149), Expect = 6e-77 Identities = 209/229 (91%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||| Sbjct: 1069 actcgagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttggcgccga 1010 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1009 ggtctgtgtccgacggctgcacgctctcgaagacgccaatcacctcgccggtctctggct 950 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | |||||||||||||| || || || |||||||| ||||||| Sbjct: 949 tgctcttggtgacgctcaacgtgatgttgcccgtcgacgacgaggcgttcttgacgttct 890 Query: 388 ccttggccagctcctcctcgtctcctctgcctccggcgggcagcgccac 436 |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 889 ccttagcgagctcctcctcgtctcctctgcctccggcggggagcgccac 841
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 210 bits (106), Expect = 3e-51 Identities = 182/209 (87%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccga 267 |||||||||| |||||||| | ||||| ||||||||||||||||||||||| |||| Sbjct: 1322 actcgagctgagcgtaccagannnnntggatcttgacatccttgggcgccttggccccga 1263 Query: 268 ggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggct 327 |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| | Sbjct: 1262 ggtcggtgtcggacggctgcacgctctcgaagacgccgatgacctcgccggtctccgggt 1203 Query: 328 tgctcttggtcacgctgagggtgatgttgcccgtggaggaggacgcgttcttcacgttct 387 |||||||||| ||||| | ||||||||||| |||||||||| |||||||| | ||||| Sbjct: 1202 tgctcttggtgacgctcaacgtgatgttgccggtggaggaggcggcgttcttgatgttct 1143 Query: 388 ccttggccagctcctcctcgtctcctctg 416 |||| |||||||||||||| |||||| Sbjct: 1142 ccttctggagctcctcctcgtcacctctg 1114
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 97.6 bits (49), Expect = 3e-17 Identities = 169/209 (80%) Strand = Plus / Minus Query: 231 ccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcacg 290 |||||||| ||||||||||| || |||| || || | || ||||| || || |||| | Sbjct: 980 ccctggatcttgacatccttagggacctttgctcccaaatcagtgtcagatggttgcagg 921 Query: 291 ctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggtg 350 |||||||| || || || ||||| |||||||| |||||||||||||| || | |||||| Sbjct: 920 ctctcgaacactccaataacctctccggtctcaggcttgctcttggtgacacccagggtg 861 Query: 351 atgttgcccgtggaggaggacgcgttcttcacgttctccttggccagctcctcctcgtct 410 || || || || || || || | |||||| | ||||||||||| ||||||||||| ||| Sbjct: 860 attttcccagttgacgatgatgtgttcttgatgttctccttggtgagctcctcctcatct 801 Query: 411 cctctgcctccggcgggcagcgccaccgc 439 ||||||||||| || ||||| |||||||| Sbjct: 800 cctctgcctcccgcaggcagtgccaccgc 772
>dbj|D21109.1|RICYK174 Oryza sativa mRNA for oxygen-evolving protein, partial sequence Length = 328 Score = 75.8 bits (38), Expect = 1e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 212 gagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccgag 268 |||||||||||||||||| || ||||| ||||||||||||||| |||| |||||||| Sbjct: 86 gagctgcgcgtaccacaccccttggatcttgacatccttgggcaccttngcgccgag 30
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 917 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 870 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 576 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 529 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 728 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 669 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 668 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 610
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 831 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 784 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 876 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 829 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1028 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 969 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 968 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 910
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 831 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 784 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 983 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 924 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 923 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 865
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 865 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 818 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 871 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 824 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1023 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 964 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 963 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 905
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 865 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 818 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 865 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 818 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1017 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 958 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 957 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 899
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1247 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 1200 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1399 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1340 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1339 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 1281
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 856 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 809 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1008 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 949 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 948 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 890
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 847 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 800 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || |||| ||| || || ||| Sbjct: 999 taccacaccccttggatcttcacatcctttggtaccttagcaccgaagtcagtatccgac 940 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 939 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 881
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 917 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 870 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1069 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 1010 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1009 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 951
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 58872 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 58825 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 59024 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 58965 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 58964 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 58906
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1248 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 1201 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| ||||| ||| Sbjct: 1400 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtgtccgac 1341 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 1340 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctcttagtcac 1282
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 864 gttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 817 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1016 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 957 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 956 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 69.9 bits (35), Expect = 7e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 375 ttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 ||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 862 ttcttcacgttctcctttacaagctcctcctcgtctcctctgcctcc 816 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 291 ctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 947 ctctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 898
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 207 gactcgagctgcgcgtaccacacaccctggatattgacatccttgggcgccttggcgccg 266 ||||||||||| || ||||| || |||||||| || |||||||| || || || || || Sbjct: 66564 gactcgagctgagcataccaaactccctggatcttcacatcctttggagctttcgctccc 66623 Query: 267 aggtcggtgtctgacggctgcacgctctcgaagacgcctatcacctcgccggtctccggc 326 | || ||||| |||||||| | ||||||||| || || |||||||| ||||| || ||| Sbjct: 66624 aaatcagtgtcggacggctgaatgctctcgaacacaccaatcacctcaccggtatcaggc 66683 Query: 327 ttgctcttggtcacgct 343 ||||||| |||||||| Sbjct: 66684 ttgctctgtgtcacgct 66700
>ref|NM_114942.2| Arabidopsis thaliana PSBO-2/PSBO2; oxygen evolving AT3G50820 (PSBO-2/PSBO2) mRNA, complete cds Length = 1243 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 943 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 888
>gb|BT015545.1| Arabidopsis thaliana At3g50820 mRNA sequence Length = 738 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 570 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 515
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 886 gttcttcacgttctccttcgaaagctcctcttcgtctcctctgcctcc 839 Score = 46.1 bits (23), Expect = 0.096 Identities = 95/119 (79%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || ||||||| || | ||| || || ||| Sbjct: 1038 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatccgac 979 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 || || | |||||||| || || ||||| || || |||||||| |||||||||||||| Sbjct: 978 gggtgaagactctcgaacactccgatcacttctcctgtctccggtttgctcttggtcac 920
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| | |||||||| ||||||||||||||||| Sbjct: 895 gttcttcacgttctccttcgaaagctcctcttcgtctcctctgcctcc 848 Score = 46.1 bits (23), Expect = 0.096 Identities = 95/119 (79%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || ||||||| || | ||| || || ||| Sbjct: 1047 taccacaccccttggatcttcacatcctttggtaccttggcacccaagtcagtatcagac 988 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||| ||| || || ||||| || || |||||||| |||||||||||||| Sbjct: 987 ggctgaagactctggaacactccgatcacttctcctgtctccggtttgctcttggtcac 929
>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3 Length = 89469 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 39813 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 39868
>gb|AY116934.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 996 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 828 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 773
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 63.9 bits (32), Expect = 4e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctcc 421 |||||||||||| ||||| | |||||||||||||||||||||||||| Sbjct: 867 gttcttcacgttttcctttacaagctcctcctcgtctcctctgcctcc 820 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Minus Query: 222 taccacacaccctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgac 281 |||||||| || ||||| || |||||||| || |||| || || | ||| || || ||| Sbjct: 1019 taccacaccccttggatcttcacatcctttggtaccttagcacccaagtcagtatccgac 960 Query: 282 ggctgcacgctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcac 340 ||||| | |||||||| || || |||||||| || ||||||||||||||||| ||||| Sbjct: 959 ggctgaagactctcgaacactccgatcacctctcctgtctccggcttgctctttgtcac 901
>gb|AY050362.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 1127 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 886 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 831
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 63.9 bits (32), Expect = 4e-07 Identities = 152/192 (79%) Strand = Plus / Minus Query: 230 accctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 289 ||||||||| || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctggattttcacatccttggggacctttgcaccgagatcagtatcagatggctggat 932 Query: 290 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 349 |||||| || || || || ||||| |||||||| ||||||| || ||| || || ||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgcactgggtaacactcagggt 872 Query: 350 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagctcctcctcgtc 409 ||| || || || || || | | ||||| ||||||||||| | |||||||||||||| Sbjct: 871 gatctttcctgtagaagatgcagtattctttacgttctccttctcaagctcctcctcgtc 812 Query: 410 tcctctgcctcc 421 |||||| ||||| Sbjct: 811 tcctctccctcc 800
>emb|BX823920.1|CNS0A6OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1067 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 834 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 779
>emb|BX823297.1|CNS0A6KS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 395 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 340
>gb|AY088799.1| Arabidopsis thaliana clone 95531 mRNA, complete sequence Length = 1189 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 943 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 888
>emb|X64349.1|NT33WOP2 N.tabacum mRNA for 33 kDa polypeptide of water-oxidizing complex of photosystem II Length = 1123 Score = 63.9 bits (32), Expect = 4e-07 Identities = 152/192 (79%) Strand = Plus / Minus Query: 230 accctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 289 |||||| || || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 991 accctgaattttcacatccttgggaacctttgcaccgagatcagtatcagatggctggat 932 Query: 290 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 349 |||||| || || || || ||||| |||||||| |||||||||| ||| || || ||||| Sbjct: 931 gctctcaaatactccaatgacctcaccggtctctggcttgctctgggtaacactcagggt 872 Query: 350 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagctcctcctcgtc 409 ||| || || || || || || | ||||| ||||||||||| |||||||||||||| Sbjct: 871 gatctttcctgtagaagatgaagtattctttacgttctccttctgaagctcctcctcgtc 812 Query: 410 tcctctgcctcc 421 |||||| ||||| Sbjct: 811 tcctctccctcc 800
>emb|AJ145957.1|ATH145957 Arabidopsis thaliana mRNA for precursor of the 33 kDa subunit of the oxygen evolving complex (psbO2 gene) Length = 1159 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggcgggca 429 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| |||| Sbjct: 864 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggcaggca 809
>emb|BX822412.1|CNS0A77V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcctccggc 424 |||||| ||||| ||||||| ||||| ||||||||||||||||||||||| Sbjct: 850 gttcttgacgttttccttggatagctcttcctcgtctcctctgcctccggc 800
>gb|AF139818.1|AF139818 Brassica napus 33 kDa oxygen evolving protein of photosystem II (psbo) mRNA, complete cds Length = 1247 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 374 gttcttcacgttctccttggccagctcctcctcgtctcctctgcct 419 |||||||||||||||||| | |||||||| ||||||||||||||| Sbjct: 836 gttcttcacgttctcctttgagagctcctcttcgtctcctctgcct 791
>gb|AY952375.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 33 kDa subunit (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1048 Score = 56.0 bits (28), Expect = 1e-04 Identities = 151/192 (78%) Strand = Plus / Minus Query: 230 accctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 289 ||||||||| || ||||||||||| |||| || ||||| || || || || ||||| | Sbjct: 985 accctggattttcacatccttggggacctttgcaccgagatcagtatcagatggctggat 926 Query: 290 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 349 |||||| || || || || ||||| ||||||| |||||||||| ||| || || ||||| Sbjct: 925 gctctcaaatactccaatgacctcaccggtctgtggcttgctctgggtaacactcagggt 866 Query: 350 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagctcctcctcgtc 409 ||| || || || || || | | ||||| ||||||||||| | ||||||||||| || Sbjct: 865 gatctttcctgtagaagatgcagtattctttacgttctccttctcaagctcctcctcatc 806 Query: 410 tcctctgcctcc 421 |||||| ||||| Sbjct: 805 tcctctccctcc 794
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 48.1 bits (24), Expect = 0.024 Identities = 150/192 (78%) Strand = Plus / Minus Query: 230 accctggatattgacatccttgggcgccttggcgccgaggtcggtgtctgacggctgcac 289 ||||||||| |||||||||||||| |||| || || || || || || || ||||| | Sbjct: 990 accctggattttgacatccttgggaacctttgcccccagatcagtatcagatggctggat 931 Query: 290 gctctcgaagacgcctatcacctcgccggtctccggcttgctcttggtcacgctgagggt 349 |||||| || || || || ||||| || ||||| |||||||||| ||| || || | ||| Sbjct: 930 gctctcaaatactccaatgacctcaccagtctctggcttgctctgggtaacactcaaggt 871 Query: 350 gatgttgcccgtggaggaggacgcgttcttcacgttctccttggccagctcctcctcgtc 409 ||| || || || | || | | |||||| ||||||||||| |||||||||||||| Sbjct: 870 gatctttcctgttaaagatgcagtgttctttacgttctccttctgaagctcctcctcgtc 811 Query: 410 tcctctgcctcc 421 |||||| ||||| Sbjct: 810 tcctctccctcc 799
>ref|XM_483762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 509 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 acgttctccttggccagctcctcctcg 407 ||||||||||||||| ||||||||||| Sbjct: 207 acgttctccttggcccgctcctcctcg 181
>ref|XM_507334.1| PREDICTED Oryza sativa (japonica cultivar-group), P0562A06.11 mRNA Length = 561 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 acgttctccttggccagctcctcctcg 407 ||||||||||||||| ||||||||||| Sbjct: 253 acgttctccttggcccgctcctcctcg 227
>ref|XM_505779.1| Yarrowia lipolytica CLIB122, YALI0F23221g predicted mRNA Length = 1518 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Minus Query: 384 ttctccttggccagctcctcctc 406 ||||||||||||||||||||||| Sbjct: 1508 ttctccttggccagctcctcctc 1486
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 acgttctccttggccagctcctcctcg 407 ||||||||||||||| ||||||||||| Sbjct: 27959206 acgttctccttggcccgctcctcctcg 27959180
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 acgttctccttggccagctcctcctcg 407 ||||||||||||||| ||||||||||| Sbjct: 36698 acgttctccttggcccgctcctcctcg 36672
>dbj|AK099200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116D07, full insert sequence Length = 509 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 acgttctccttggccagctcctcctcg 407 ||||||||||||||| ||||||||||| Sbjct: 207 acgttctccttggcccgctcctcctcg 181
>dbj|AK060402.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C04, full insert sequence Length = 561 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 acgttctccttggccagctcctcctcg 407 ||||||||||||||| ||||||||||| Sbjct: 253 acgttctccttggcccgctcctcctcg 227
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.096 Identities = 23/23 (100%) Strand = Plus / Plus Query: 384 ttctccttggccagctcctcctc 406 ||||||||||||||||||||||| Sbjct: 3045240 ttctccttggccagctcctcctc 3045262 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ctccttggccagctcctcct 405 |||||||||||||||||||| Sbjct: 1792326 ctccttggccagctcctcct 1792307
>dbj|AB029059.1| Oryza sativa (japonica cultivar-group) OsIF1-1 mRNA for F1F0-ATPase inhibitor protein, complete cds Length = 498 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Minus Query: 381 acgttctccttggccagctcctcctcg 407 ||||||||||||||| ||||||||||| Sbjct: 165 acgttctccttggcccgctcctcctcg 139
>gb|BT014033.1| Lycopersicon esculentum clone 133096F, mRNA sequence Length = 1170 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 agctcctcctcgtctcctctgcctcc 421 ||||||||||| |||||||||||||| Sbjct: 842 agctcctcctcatctcctctgcctcc 817
>gb|AC132302.3| Mus musculus BAC clone RP24-279N5 from chromosome 3, complete sequence Length = 157307 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacacatt 119 |||||||||||||||||||||| Sbjct: 90658 tagatacacacacaaacacatt 90679
>gb|AC156615.7| Mus musculus chromosome 3, clone RP23-1B20, complete sequence Length = 210003 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacacatt 119 |||||||||||||||||||||| Sbjct: 171881 tagatacacacacaaacacatt 171902
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 208 actcgagctgcgcgtaccacac 229 |||||||||||||||||||||| Sbjct: 28 actcgagctgcgcgtaccacac 7
>emb|X17578.1|STPPOEC S.tuberosum mRNA for a 33kDa precursor protein of the oxygen-evolving complex Length = 1116 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 agctcctcctcgtctcctctgcctcc 421 ||||||||||| |||||||||||||| Sbjct: 806 agctcctcctcatctcctctgcctcc 781
>gb|AC107725.10| Mus musculus chromosome 5, clone RP23-477O15, complete sequence Length = 169321 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 93 tatactagatacacacacaaacaca 117 ||||||||||||||||||| ||||| Sbjct: 99393 tatactagatacacacacacacaca 99417
>ref|XM_473222.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1281 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccg 422 ||||||||||||||||| ||||||| Sbjct: 31 ctcctcctcgtctcctccgcctccg 55
>gb|BT016549.1| Zea mays clone Contig382 mRNA sequence Length = 713 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 389 cttggccagctcctcctcgtc 409 ||||||||||||||||||||| Sbjct: 99 cttggccagctcctcctcgtc 119
>gb|AC147721.6| Mus musculus chromosome 10, clone RP24-250J7, complete sequence Length = 70656 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 101 atacacacacaaacacattgttgcc 125 ||||||||||| ||||||||||||| Sbjct: 66999 atacacacacatacacattgttgcc 66975
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 acacacacaaacacattgttg 123 ||||||||||||||||||||| Sbjct: 125345 acacacacaaacacattgttg 125325
>gb|AC099601.6| Mus musculus chromosome 7, clone RP23-240K1, complete sequence Length = 252659 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 101 atacacacacaaacacattgt 121 ||||||||||||||||||||| Sbjct: 110153 atacacacacaaacacattgt 110173
>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1 and two CpG islands, complete sequence Length = 65922 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctccttggccagctcctcctc 406 ||||||||||||||||||||| Sbjct: 28382 ctccttggccagctcctcctc 28362
>emb|AL596022.12| Zebrafish DNA sequence from clone BUSM1-107O16 in linkage group 17 Contains part of a novel gene for a protein similar to vertebrate anaplastic lymphoma kinase (ALK) and leukocyte tyrosine kinase receptor prescursor (LTK or TYK1) and part of a novel gene for a protein similar to vertebrate inositol 1,4,5-triphosphate 3-kinase (ITPKA), complete sequence Length = 121941 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 acacacacaaacacattgttg 123 ||||||||||||||||||||| Sbjct: 38879 acacacacaaacacattgttg 38899
>emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in linkage group 14, complete sequence Length = 97391 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 aacagaagctaaaatataaac 77 ||||||||||||||||||||| Sbjct: 73732 aacagaagctaaaatataaac 73752
>gb|AC102677.9| Mus musculus chromosome 5, clone RP24-67M11, complete sequence Length = 167898 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacacat 118 ||||||||||||||||||||| Sbjct: 108202 tagatacacacacaaacacat 108222
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 246 tccttgggcgccttggcgccgaggtcggtgtctgacggctg 286 |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct: 857 tccttgggggccttggcgcccaggtcagtgtccgagggctg 817
>gb|AC026785.4| Homo sapiens chromosome 5 clone CTD-2139B15, complete sequence Length = 152010 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 agctggtgagcaagaaatgat 56 ||||||||||||||||||||| Sbjct: 64103 agctggtgagcaagaaatgat 64083
>emb|BX539317.4| Zebrafish DNA sequence from clone DKEY-170L10 in linkage group 17, complete sequence Length = 117893 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 103 acacacacaaacacattgttg 123 ||||||||||||||||||||| Sbjct: 35597 acacacacaaacacattgttg 35617
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccg 422 ||||||||||||||||| ||||||| Sbjct: 26088275 ctcctcctcgtctcctccgcctccg 26088299
>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence Length = 185368 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacacat 118 ||||||||||||||||||||| Sbjct: 1814 tagatacacacacaaacacat 1834
>gb|AC008045.5|AC008045 Homo sapiens chromosome 14q31 clone CTD-2552H2 containing neurexin III gene, partial cds, complete sequence Length = 188078 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 ggaacatacacattcatgggg 22 ||||||||||||||||||||| Sbjct: 30583 ggaacatacacattcatgggg 30603
>dbj|AK103369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126P16, full insert sequence Length = 816 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccg 422 ||||||||||||||||| ||||||| Sbjct: 64 ctcctcctcgtctcctccgcctccg 88
>dbj|AK102934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114I03, full insert sequence Length = 1488 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccg 422 ||||||||||||||||| ||||||| Sbjct: 89 ctcctcctcgtctcctccgcctccg 113
>dbj|AK061536.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F08, full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccg 422 ||||||||||||||||| ||||||| Sbjct: 65 ctcctcctcgtctcctccgcctccg 89
>emb|AL590148.8| Zebrafish DNA sequence from clone RP71-30I22 in linkage group 8 Contains part of a novel gene for a protein similar to human FLJ12550, the pim1 gene for pim-1 oncogene (proviral integration site 1), part of a novel gene for a protein similar to vertebrate UDP-galactose transporters, a novel gene for a protein similar to vertebrate caldesmon 1 (CALD1) and a CpG island, complete sequence Length = 140984 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacacat 118 ||||||||||||||||||||| Sbjct: 123340 tagatacacacacaaacacat 123360
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccg 422 ||||||||||||||||| ||||||| Sbjct: 122602 ctcctcctcgtctcctccgcctccg 122626
>gb|AC102467.6| Mus musculus chromosome 1, clone RP24-348G21, complete sequence Length = 167344 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacacat 118 ||||||||||||||||||||| Sbjct: 126906 tagatacacacacaaacacat 126886
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 103 acacacacaaacacattgttgcctc 127 ||||||||| ||||||||||||||| Sbjct: 84913 acacacacacacacattgttgcctc 84937
>emb|AL445385.4|CNS07ED1 Human chromosome 14 DNA sequence BAC R-126I9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163784 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 agatacacacacaaacacatt 119 ||||||||||||||||||||| Sbjct: 120308 agatacacacacaaacacatt 120288
>ref|XM_514032.1| PREDICTED: Pan troglodytes LOC457555 (LOC457555), mRNA Length = 4122 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 gccagctcctcctcgtctcctctg 416 |||||||||||||||| ||||||| Sbjct: 37 gccagctcctcctcgtttcctctg 14
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 ccagctcctcctcgtctcctctgc 417 |||||||||||||||||| ||||| Sbjct: 85200 ccagctcctcctcgtctcatctgc 85177
>ref|XM_875064.1| PREDICTED: Bos taurus similar to glucose-fructose oxidoreductase domain containing 1, transcript variant 2 (LOC520966), mRNA Length = 1403 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 136 tctccttggccagctcctcc 117
>ref|XM_599218.2| PREDICTED: Bos taurus similar to glucose-fructose oxidoreductase domain containing 1, transcript variant 1 (LOC520966), mRNA Length = 1185 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 136 tctccttggccagctcctcc 117
>ref|XM_418941.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ20330 (LOC420852), mRNA Length = 554 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 146 tctccttggccagctcctcc 127
>ref|XM_959978.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 acgctgagggtgatgttgcc 358 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>ref|XM_960181.1| Neurospora crassa OR74A hypothetical protein (NCU08371.1) partial mRNA Length = 2259 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctcc 421 ||||||||| |||||||||||||| Sbjct: 1767 ctcctcctcctctcctctgcctcc 1790
>ref|XM_329416.1| Neurospora crassa OR74A hypothetical protein (NCU08371.1) partial mRNA Length = 2259 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctcc 421 ||||||||| |||||||||||||| Sbjct: 1767 ctcctcctcctctcctctgcctcc 1790
>ref|XM_331675.1| Neurospora crassa OR74A hypothetical protein (NCU02477.1) partial mRNA Length = 1620 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 acgctgagggtgatgttgcc 358 |||||||||||||||||||| Sbjct: 119 acgctgagggtgatgttgcc 138
>ref|NM_018988.1| Homo sapiens glucose-fructose oxidoreductase domain containing 1 (GFOD1), mRNA Length = 3033 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 801 tctccttggccagctcctcc 782
>gb|AC023175.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-69B14, complete sequence Length = 195667 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agctggtgagcaagaaatga 55 |||||||||||||||||||| Sbjct: 166557 agctggtgagcaagaaatga 166576
>gb|AC164103.5| Mus musculus BAC clone RP23-427D2 from chromosome 5, complete sequence Length = 188588 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 31552 agatacacacacaaacacat 31571
>gb|AC133950.4| Mus musculus BAC clone RP24-243C16 from chromosome 7, complete sequence Length = 176244 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 ctcctcctcgtctcctctgcctcc 421 ||||||||| |||||||||||||| Sbjct: 56138 ctcctcctcctctcctctgcctcc 56115
>gb|AC134438.3| Mus musculus BAC clone RP24-470G3 from chromosome 5, complete sequence Length = 140395 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 50855 agatacacacacaaacacat 50836
>gb|AC140233.3| Mus musculus BAC clone RP23-282N19 from chromosome 19, complete sequence Length = 195305 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 29760 tagatacacacacaaacaca 29779
>ref|XM_802280.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511685.40) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tgttgcccgtggaggaggac 371 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence Length = 205173 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctcc 421 |||||||||||||||||| ||||| Sbjct: 189896 ctcctcctcgtctcctcttcctcc 189919
>gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome 14, complete sequence Length = 165934 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 atactagatacacacacaaacaca 117 |||||||| ||||||||||||||| Sbjct: 143560 atactagacacacacacaaacaca 143583
>gb|AC129326.3| Mus musculus BAC clone RP23-326H12 from chromosome 19, complete sequence Length = 184128 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 ttttatactagatacacacacaaacaca 117 |||||| ||||||||||||||| ||||| Sbjct: 110726 ttttattctagatacacacacacacaca 110753
>ref|XM_815950.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508741.90) partial mRNA Length = 2223 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 tgttgcccgtggaggaggac 371 |||||||||||||||||||| Sbjct: 446 tgttgcccgtggaggaggac 465
>gb|AC092089.2| Danio rerio clone 85I7, complete sequence Length = 62442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 acacacacaaacacattgtt 122 |||||||||||||||||||| Sbjct: 7761 acacacacaaacacattgtt 7780
>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence Length = 206833 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 110575 agatacacacacaaacacat 110556
>gb|AC122808.3| Mus musculus BAC clone RP23-298M23 from 3, complete sequence Length = 190130 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 128133 tagatacacacacaaacaca 128114 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 127995 tagatacacacacaaacaca 127976
>ref|XM_763044.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_64_29090_28800) partial mRNA Length = 291 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccggcg 425 |||||||||||| ||||||||| ||||| Sbjct: 83 ctcctcctcgtcgcctctgccttcggcg 110
>ref|XM_764745.1| Giardia lamblia ATCC 50803 protein disulfide isomerase (GLP_217_21978_22328) partial mRNA Length = 351 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccggcg 425 |||||||||||| ||||||||| ||||| Sbjct: 13 ctcctcctcgtcgcctctgccttcggcg 40
>ref|XM_763043.1| Giardia lamblia ATCC 50803 protein disulfide isomerase (GLP_64_29074_28670) partial mRNA Length = 405 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccggcg 425 |||||||||||| ||||||||| ||||| Sbjct: 67 ctcctcctcgtcgcctctgccttcggcg 94
>gb|AC116451.7| Mus musculus chromosome 19, clone RP24-273P9, complete sequence Length = 218079 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 90 ttttatactagatacacacacaaacaca 117 |||||| ||||||||||||||| ||||| Sbjct: 209933 ttttattctagatacacacacacacaca 209960
>emb|AL731544.11| Human DNA sequence from clone RP11-514F8 on chromosome 10 Contains the 3' end of the gene for a novel SH2 domain-containing protein, a novel gene and a CpG island, complete sequence Length = 98873 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 89120 agatacacacacaaacacat 89101
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 179 tatcttcacttctgctatgctctagtta 206 ||||| |||||||||| ||||||||||| Sbjct: 137608 tatctgcacttctgctgtgctctagtta 137635
>emb|AL591604.6| Human DNA sequence from clone RP11-356F4 on chromosome 1 Contains the 5' end of the SLICK gene for a sodium- and chloride-activated ATP-sensitive potassium channel, complete sequence Length = 185560 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 63208 tagatacacacacaaacaca 63227
>emb|AL589844.4| Human DNA sequence from clone RP11-436F21 on chromosome 9 Contains the 3' end of a novel gene and 5'end of a novel gene, complete sequence Length = 157982 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 62246 tagatacacacacaaacaca 62265
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a novel gene (ortholog of human ADG-90), the 5' end of a novel gene (FLJ20330), a novel gene, a ribosomal protein s4x (Rps4x) pseudogene and three CpG islands, complete sequence Length = 124659 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 42445 tctccttggccagctcctcc 42464
>ref|XM_505369.1| Yarrowia lipolytica CLIB122, YALI0F13343g predicted mRNA Length = 6255 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 386 ctccttggccagctcctcct 405 |||||||||||||||||||| Sbjct: 3537 ctccttggccagctcctcct 3518
>emb|AL353708.10| Human DNA sequence from clone RP11-533E19 on chromosome 1 Contains the 5' ends of two novel genes, two novel genes and a laminin receptor 1 (ribosomal protein SA, 67kDa) (LAMR1) pseudogene, complete sequence Length = 90125 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 393 gccagctcctcctcgtctcctctg 416 |||||||||||||||| ||||||| Sbjct: 72937 gccagctcctcctcgtttcctctg 72914
>emb|CR354557.9| Zebrafish DNA sequence from clone DKEY-34I7 in linkage group 23, complete sequence Length = 127420 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 aacagaagctaaaatataaa 76 |||||||||||||||||||| Sbjct: 79443 aacagaagctaaaatataaa 79462
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 acgctgagggtgatgttgcc 358 |||||||||||||||||||| Sbjct: 90457 acgctgagggtgatgttgcc 90438
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ccgtggaggaggacgcgttc 377 |||||||||||||||||||| Sbjct: 76750 ccgtggaggaggacgcgttc 76769
>gb|AC108484.25| Mus musculus strain 129/Sv clone ct7-293m19 map 19, complete sequence Length = 170321 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 39142 tagatacacacacaaacaca 39161
>emb|AJ784854.1| Cyanophora paradoxa mRNA for oxygen-evolving enhancer protein 1 (psbO gene) Length = 1338 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 cgttctccttggccagctcctcct 405 |||||||||| ||||||||||||| Sbjct: 860 cgttctccttagccagctcctcct 837
>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence Length = 250797 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 cacacacaaacacattgttg 123 |||||||||||||||||||| Sbjct: 160427 cacacacaaacacattgttg 160408
>emb|BX005114.6| Mouse DNA sequence from clone RP24-199F23 on chromosome 11 no genes, complete sequence Length = 135695 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 39625 tagatacacacacaaacaca 39606
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 tgagggtgatgttgcccgtggagg 366 |||||||||||| ||||||||||| Sbjct: 3055754 tgagggtgatgtcgcccgtggagg 3055731
>gb|AC116693.23| Mus musculus chromosome 8, clone RP24-372D19, complete sequence Length = 163719 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 34550 tagatacacacacaaacaca 34531 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 34305 tagatacacacacaaacaca 34286
>gb|AC026711.6| Homo sapiens chromosome 5 clone CTD-2093E18, complete sequence Length = 191309 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 173809 tagatacacacacaaacaca 173828
>gb|AY860592.1| Physcia aipolia isolate 8Aa 26S ribosomal RNA gene, partial sequence Length = 1314 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gtgatgttgcccgtggagga 367 |||||||||||||||||||| Sbjct: 546 gtgatgttgcccgtggagga 527
>gb|AY860591.1| Physcia aipolia isolate 2Ab 26S ribosomal RNA gene, partial sequence Length = 1437 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gtgatgttgcccgtggagga 367 |||||||||||||||||||| Sbjct: 586 gtgatgttgcccgtggagga 567
>gb|AY860590.1| Physcia aipolia isolate 6Ah 26S ribosomal RNA gene, partial sequence Length = 1321 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gtgatgttgcccgtggagga 367 |||||||||||||||||||| Sbjct: 554 gtgatgttgcccgtggagga 535
>emb|CR386366.1| Gallus gallus finished cDNA, clone ChEST938k13 Length = 558 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 149 tctccttggccagctcctcc 130
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 ccagctcctcctcgtctcctctgc 417 |||||||||||||||||| ||||| Sbjct: 14356414 ccagctcctcctcgtctcatctgc 14356391
>gb|AF164624.1|AF164624 Giardia intestinalis protein disulfide isomerase 5 (PDI-5) gene, complete cds Length = 540 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccggcg 425 |||||||||||| ||||||||| ||||| Sbjct: 127 ctcctcctcgtcgcctctgccttcggcg 154
>gb|AY773914.1| Physcia aipolia 26S large subunit ribosomal RNA gene, partial sequence Length = 1436 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gtgatgttgcccgtggagga 367 |||||||||||||||||||| Sbjct: 585 gtgatgttgcccgtggagga 566
>gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome 14, complete sequence Length = 152380 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 71581 agatacacacacaaacacat 71600
>gb|AC006375.4| Homo sapiens BAC clone RP11-362A15 from 2, complete sequence Length = 111073 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 atactagatacacacacaaacaca 117 |||||| ||||||||||||||||| Sbjct: 5616 atactacatacacacacaaacaca 5639
>gb|AC009498.4| Homo sapiens BAC clone RP11-507C18 from 2, complete sequence Length = 199954 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 ttgcctcgattctttcctct 140 |||||||||||||||||||| Sbjct: 120467 ttgcctcgattctttcctct 120448
>gb|AC092620.2| Homo sapiens BAC clone RP11-231E19 from 2, complete sequence Length = 151037 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 28057 agatacacacacaaacacat 28038
>gb|AC010281.4|AC010281 Homo sapiens chromosome 5 clone CTC-553B9, complete sequence Length = 160378 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 61566 tagatacacacacaaacaca 61547
>gb|AF164117.1|AF164117 Giardia intestinalis protein disulfide isomerase 3 gene, complete cds Length = 550 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 398 ctcctcctcgtctcctctgcctccggcg 425 |||||||||||| ||||||||| ||||| Sbjct: 127 ctcctcctcgtcgcctctgccttcggcg 154
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence Length = 121575 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 80072 tctccttggccagctcctcc 80053
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 cgccttggcgccgaggtcgg 273 |||||||||||||||||||| Sbjct: 3379461 cgccttggcgccgaggtcgg 3379480 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 420 ccggcgggcagcgccaccgc 439 |||||||||||||||||||| Sbjct: 2309959 ccggcgggcagcgccaccgc 2309940
>dbj|AK000337.1| Homo sapiens cDNA FLJ20330 fis, clone HEP10296 Length = 3033 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 801 tctccttggccagctcctcc 782
>ref|XM_556986.1| Anopheles gambiae str. PEST ENSANGP00000026473 (ENSANGG00000023329), partial mRNA Length = 564 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 cttggccagctcctcctcgt 408 |||||||||||||||||||| Sbjct: 384 cttggccagctcctcctcgt 365
>dbj|AK111406.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E08, full insert sequence Length = 1428 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 ccagctcctcctcgtctcctctgc 417 |||||||||||||||||| ||||| Sbjct: 954 ccagctcctcctcgtctcatctgc 977
>emb|CR854941.8| Zebrafish DNA sequence from clone CH211-214G6 in linkage group 12, complete sequence Length = 135174 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 97 ctagatacacacacaaacacattg 120 ||||||||||||||| |||||||| Sbjct: 23476 ctagatacacacacatacacattg 23453
>gb|AC153016.2| Mus musculus BAC clone RP23-182K18 from 13, complete sequence Length = 224420 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 149739 agatacacacacaaacacat 149758
>emb|BX001012.6| Zebrafish DNA sequence from clone CH211-11C20 in linkage group 4, complete sequence Length = 158481 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 aacagaagctaaaatataaa 76 |||||||||||||||||||| Sbjct: 41290 aacagaagctaaaatataaa 41271
>gb|AF147744.1|AF147744 Staphylococcus aureus strain C55 lantibiotic structural protein alpha, lantibiotic structural protein beta, lantibiotic modifying enzyme, and transporter genes, complete cds Length = 6276 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 taacagaagctaaaatataa 75 |||||||||||||||||||| Sbjct: 168 taacagaagctaaaatataa 187
>emb|AL117672.5|CNS01DRN Human chromosome 14 DNA sequence BAC R-142C1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179902 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 gttttatactagatacacacacaaacac 116 ||||||||||||| ||| |||||||||| Sbjct: 77284 gttttatactagacacaaacacaaacac 77311
>emb|AL162311.5|CNS01RHR Human chromosome 14 DNA sequence BAC R-317N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167127 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 144515 tagatacacacacaaacaca 144496
>dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-90I16, complete sequence Length = 154159 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 atacacacacaaacacattg 120 |||||||||||||||||||| Sbjct: 63890 atacacacacaaacacattg 63909
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 577059 tctccttggccagctcctcc 577040
>emb|CR933820.6| Zebrafish DNA sequence from clone DKEY-183J2 in linkage group 11, complete sequence Length = 230267 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 atactagatacacacacaaacaca 117 |||||||| ||||||||||||||| Sbjct: 172576 atactagacacacacacaaacaca 172599
>emb|AL954861.11| Zebrafish DNA sequence from clone CH211-8I17, complete sequence Length = 175026 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 85842 tagatacacacacaaacaca 85823
>emb|CT009600.12| Mouse DNA sequence from clone RP23-76M10 on chromosome 14, complete sequence Length = 217257 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 atactagatacacacacaaacaca 117 |||||||| ||||||||||||||| Sbjct: 187219 atactagacacacacacaaacaca 187196
>gb|AF071792.1|AF071792 Micromonospora olivasterospora RNA polymerase sigma-like factor gene, partial cds Length = 486 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 172 tctccttggccagctcctcc 153
>gb|AF071791.1|AF071791 Micromonospora purpurea RNA polymerase sigma-like factor gene, partial cds Length = 483 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tctccttggccagctcctcc 404 |||||||||||||||||||| Sbjct: 172 tctccttggccagctcctcc 153
>gb|AC150681.2| Mus musculus BAC clone RP24-490A22 from 7, complete sequence Length = 195652 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 agatacacacacaaacacat 118 |||||||||||||||||||| Sbjct: 128809 agatacacacacaaacacat 128790
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 acgctgagggtgatgttgcc 358 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>gb|AC129777.4| Mus musculus BAC clone RP23-281H23 from 8, complete sequence Length = 228174 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 38720 tagatacacacacaaacaca 38739
>gb|AC150685.2| Mus musculus BAC clone RP23-239C12 from 19, complete sequence Length = 194627 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 24685 tagatacacacacaaacaca 24666
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 acgctgagggtgatgttgcc 358 |||||||||||||||||||| Sbjct: 2482 acgctgagggtgatgttgcc 2501
>emb|AL137818.4|CNS01DWP Human chromosome 14 DNA sequence BAC R-102C24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179714 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 tagatacacacacaaacaca 117 |||||||||||||||||||| Sbjct: 4871 tagatacacacacaaacaca 4852
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 acgctgagggtgatgttgcc 358 |||||||||||||||||||| Sbjct: 2463 acgctgagggtgatgttgcc 2482
>dbj|AP003088.1| Staphylococcus aureus TY4, ETB plasmid DNA, complete sequence Length = 38211 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 taacagaagctaaaatataa 75 |||||||||||||||||||| Sbjct: 24370 taacagaagctaaaatataa 24389 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,196,198 Number of Sequences: 3902068 Number of extensions: 5196198 Number of successful extensions: 206579 Number of sequences better than 10.0: 174 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 205795 Number of HSP's gapped (non-prelim): 777 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
