>GIDA_TREPA (O83084) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 630

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +2

Query: 74  QSITLTAKATQHTPKFSFSVQHTIPCSY*TVLYSIYYREHALIYARTRKATACFVYVCTD 253
           Q +  T + TQH   +  +V   +  +     Y  Y   HA++ AR R+ +A  V + T 
Sbjct: 107 QKVKYTLECTQHLHLYQDTVVDVVCSNTTDAGYVAYGAAHAVVTARGRRISARAVVLTTG 166

Query: 254 TWMK 265
           T+M+
Sbjct: 167 TFME 170

>NIFB_AZOVI (P11067) FeMo cofactor biosynthesis protein nifB|
          Length = 502

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 275 SSEPSSMYLCIRTQNMPLPSAFEHISKHVLCSI*NTVQFNKNRVLCVEPK 126
           S +   M LC+ T  + LP   E ++KH +  +  T+  N     CV+P+
Sbjct: 138 SEQAPDMKLCVSTNGLALPECVEELAKHNIDHV--TITIN-----CVDPE 180

>ZN294_MOUSE (Q6A009) Zinc finger protein 294 (Zfp-294)|
          Length = 1767

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 47   KTRFTEEITQSITLTAKATQHTPKFSFSVQH 139
            KT FTEE+  SI  TA    H P  + SV H
Sbjct: 1540 KTFFTEEVQLSIRETATLPYHIPHLACSVYH 1570


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,518,694
Number of Sequences: 219361
Number of extensions: 890330
Number of successful extensions: 1868
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1868
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)