>RUBR_ANAVT (Q9XBL8) Rubredoxin (Rd)|
          Length = 111

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = -2

Query: 468 AGFAQNQQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGYFLQ 340
           +GF +N  +GLG N LT  QK +LI+G+L +GF FF+S Y LQ
Sbjct: 69  SGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

>RUBR_ANASP (Q9WWN1) Rubredoxin (Rd)|
          Length = 111

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 23/43 (53%), Positives = 31/43 (72%)
 Frame = -2

Query: 468 AGFAQNQQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGYFLQ 340
           +GF +N  +GLG N LT  QK +LI+G+L +GF FF+S Y LQ
Sbjct: 69  SGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111

>RUBR_SYNY3 (P73068) Rubredoxin (Rd)|
          Length = 115

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 22/40 (55%), Positives = 29/40 (72%)
 Frame = -2

Query: 468 AGFAQNQQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGY 349
           +GFA+N  +G G N ++ G+K LLI+GSL V F FFLS Y
Sbjct: 73  SGFAENLNYGFGFNRMSGGKKNLLIFGSLFVIFLFFLSLY 112

>PROX1_MOUSE (P48437) Homeobox prospero-like protein PROX1 (PROX 1)|
          Length = 737

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 42  ERGLMPNHCKQF*SKFVRELHPQGNYSQHLKTNVPFPLCYTSPLSLWALGSRSNRYL 212
           + GL PNH K+    F    +P  N  +   ++V F  C TS L  W    R   Y+
Sbjct: 577 QEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYI 633

>PROX1_HUMAN (Q92786) Homeobox prospero-like protein PROX1 (PROX 1)|
          Length = 737

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 42  ERGLMPNHCKQF*SKFVRELHPQGNYSQHLKTNVPFPLCYTSPLSLWALGSRSNRYL 212
           + GL PNH K+    F    +P  N  +   ++V F  C TS L  W    R   Y+
Sbjct: 577 QEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYI 633

>PROX1_CHICK (Q91018) Homeobox prospero-like protein PROX1 (PROX 1)|
          Length = 736

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 42  ERGLMPNHCKQF*SKFVRELHPQGNYSQHLKTNVPFPLCYTSPLSLWALGSRSNRYL 212
           + GL PNH K+    F    +P  N  +   ++V F  C TS L  W    R   Y+
Sbjct: 576 QEGLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYI 632

>SYM_METMP (Q6M0E5) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA|
           ligase) (MetRS)
          Length = 663

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 54  MPNHCKQF*SKFVRELHPQGNYSQHLKTNVPFPLCYTSPLSLW 182
           MP H K    +++ ELH   + S+++K  VP P C    + +W
Sbjct: 207 MPEHVKNMALRWIEELH-DWDVSRNIKWGVPIPGCDDQVMYVW 248

>VNS3_RSVT (P26658) Nonstructural protein NS3|
          Length = 211

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 335 THCKK*PERKKAKPTRRLP*MSSVFWPEVSELPPSPNCWFC 457
           +H K  PE  +  PT  +      F+ EV   PPS NCW C
Sbjct: 84  SHDKNLPEEYRL-PTIMMSSSYVKFFTEVKPRPPSTNCWTC 123

>VNS3_RSVM (Q01210) Nonstructural protein NS3|
          Length = 211

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 335 THCKK*PERKKAKPTRRLP*MSSVFWPEVSELPPSPNCWFC 457
           +H K  PE  +  PT  +      F+ EV   PPS NCW C
Sbjct: 84  SHDKNLPEEYRL-PTIMMSSSYVKFFTEVKPRPPSTNCWTC 123

>LIPA1_PROMP (Q7UZY1) Lipoyl synthase 1 (EC 2.8.1.-) (Lipoic acid synthase 1)|
           (Lipoate synthase 1) (Lipoyl-acyl-carrier protein
           synthase 1) (Sulfur insertion protein lipA1) (Lip-syn 1)
          Length = 297

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 60  NHCKQF*SKFVRELHPQGNYSQHL----KTNVPFPLCYTSPLSLWALGSRSNRYL 212
           NH  +  S   R++ PQGNY + L    +T   FP  YT    +  LG + +  L
Sbjct: 165 NHNIETVSALYRKVRPQGNYQRTLELLKRTREYFPSVYTKSGFMLGLGEKDDEVL 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,536,535
Number of Sequences: 219361
Number of extensions: 1263709
Number of successful extensions: 2972
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2972
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)