ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet112c07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group... 192 7e-46
2ref|XM_467513.1| Oryza sativa (japonica cultivar-group), mRNA 192 7e-46
3ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group... 192 7e-46
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
5dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
6dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic D... 192 7e-46
7dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 7e-46
8dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 7e-46
9ref|NM_192718.1| Oryza sativa (japonica cultivar-group), predic... 105 1e-19
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
11dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
12ref|XM_550548.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
13dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
14dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
15dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
16dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
17dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
18dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
19dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
20ref|XM_749710.1| Aspergillus fumigatus Af293 cell wall protein (... 44 0.41
21ref|XM_467512.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
22gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 1.6
23gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.6
24gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.6
25dbj|AK108932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
26emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chr... 42 1.6
27ref|NM_185090.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
28gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
29ref|XM_370399.1| Magnaporthe grisea 70-15 chromosome II hypothet... 40 6.3
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.3
31gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 6.3
32emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.3
33gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete ... 40 6.3
34ref|XM_787467.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.3
35emb|AL355305.9| Human DNA sequence from clone RP11-487F23 on chr... 40 6.3
36gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom... 40 6.3
37dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 6.3
38gb|AE011718.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.3
39gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 6.3
40dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.3
43gb|AE004807.1| Pseudomonas aeruginosa PAO1, section 368 of 529 o... 40 6.3
44gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genom... 40 6.3
45dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.3
46dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
47gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 6.3
48emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.3
49emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 ... 40 6.3 
>ref|XM_506943.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19
           mRNA
          Length = 1716

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Plus

                                                                       
Query: 213 acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
           |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 325 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 384

                                                                       
Query: 273 tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
           |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 385 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 444

                                                                       
Query: 333 tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
           |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 445 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 504

                                                                       
Query: 393 ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
           |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 505 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 564

                        
Query: 453 atgccgtccttga 465
           |||||| ||||||
Sbjct: 565 atgccggccttga 577



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 63  cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
           ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 162 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 209
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>ref|XM_467513.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1716

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1392 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1333

                                                                        
Query: 273  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1332 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1273

                                                                        
Query: 333  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
            |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 1272 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1213

                                                                        
Query: 393  ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
            |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 1212 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1153

                         
Query: 453  atgccgtccttga 465
            |||||| ||||||
Sbjct: 1152 atgccggccttga 1140



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 63   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1555 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1508
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>ref|XM_506944.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_D06.19 mRNA
          Length = 1737

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1398 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1339

                                                                        
Query: 273  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1338 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1279

                                                                        
Query: 333  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
            |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 1278 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1219

                                                                        
Query: 393  ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
            |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 1218 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1159

                         
Query: 453  atgccgtccttga 465
            |||||| ||||||
Sbjct: 1158 atgccggccttga 1146



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 63   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1561 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1514
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Plus

                                                                            
Query: 213      acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
                |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 29911320 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 29911379

                                                                            
Query: 273      tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
                |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 29911380 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 29911439

                                                                            
Query: 333      tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
                |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 29911440 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 29911499

                                                                            
Query: 393      ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
                |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 29911500 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 29911559

                             
Query: 453      atgccgtccttga 465
                |||||| ||||||
Sbjct: 29911560 atgccggccttga 29911572



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 63       cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
                ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 29911157 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 29911204



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 397      tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 445
                |||||||| |||| ||||||||||| | | | |||||||||| ||||||
Sbjct: 29909062 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 29909014
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>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654B04
          Length = 156907

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Plus

                                                                         
Query: 213   acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
             |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 11596 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 11655

                                                                         
Query: 273   tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
             |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 11656 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 11715

                                                                         
Query: 333   tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
             |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 11716 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 11775

                                                                         
Query: 393   ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
             |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 11776 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 11835

                          
Query: 453   atgccgtccttga 465
             |||||| ||||||
Sbjct: 11836 atgccggccttga 11848



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 63    cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
             ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 11433 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 11480



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 397  tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 445
            |||||||| |||| ||||||||||| | | | |||||||||| ||||||
Sbjct: 9338 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 9290
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>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_D06
          Length = 112768

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Plus

                                                                         
Query: 213   acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
             |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 68285 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 68344

                                                                         
Query: 273   tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
             |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 68345 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 68404

                                                                         
Query: 333   tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
             |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 68405 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 68464

                                                                         
Query: 393   ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
             |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 68465 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 68524

                          
Query: 453   atgccgtccttga 465
             |||||| ||||||
Sbjct: 68525 atgccggccttga 68537



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                             
Query: 63    cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
             ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 68122 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 68169



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 397   tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 445
             |||||||| |||| ||||||||||| | | | |||||||||| ||||||
Sbjct: 66027 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 65979
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>dbj|AK105989.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G11, full
            insert sequence
          Length = 1716

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1392 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1333

                                                                        
Query: 273  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1332 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1273

                                                                        
Query: 333  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
            |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 1272 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1213

                                                                        
Query: 393  ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
            |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 1212 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1153

                         
Query: 453  atgccgtccttga 465
            |||||| ||||||
Sbjct: 1152 atgccggccttga 1140



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 63   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1555 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1508
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>dbj|AK101967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076I21, full
            insert sequence
          Length = 1736

 Score =  192 bits (97), Expect = 7e-46
 Identities = 214/253 (84%)
 Strand = Plus / Minus

                                                                        
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccggtgcttccg 272
            |||||||| || ||||| |  |||| |||||||||||| ||||||||||||||| | |||
Sbjct: 1397 acgtcgtacaggacctcgaacgtccgctgctgcacgttcccgatgatgccggtggtcccg 1338

                                                                        
Query: 273  tcgtcgccggtgtccgtgaacgcgaggcagctgccgaatatgatcccgttggcgtcgagg 332
            |||||||||||| | | ||||||||||||| ||||| | ||||||||||| | |||||||
Sbjct: 1337 tcgtcgccggtggcggcgaacgcgaggcagttgccgtacatgatcccgttcgggtcgagg 1278

                                                                        
Query: 333  tcgacgaccttgccgccgtcgaacaccaaagcgacggtgggtatggtgacgttgtcctgg 392
            |||| | |   |||||||  ||||||||  |||||||| ||||||| ||  | |  ||||
Sbjct: 1277 tcgatggcggcgccgccggagaacaccagcgcgacggtcggtatggagatctgggtctgg 1218

                                                                        
Query: 393  ccgctgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggtactgcttc 452
            |||  |||||||||||||||||| |||||||||||||||||||||| | |||||||||||
Sbjct: 1217 ccggcgaagtcgaagcacgtgtcgaggatgctcctggccggcgccgaccggtactgcttc 1158

                         
Query: 453  atgccgtccttga 465
            |||||| ||||||
Sbjct: 1157 atgccggccttga 1145



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 63   cttacctcgcaactagaaacaagaagacaaccacatgagagcagccta 110
            ||||||||||||| | ||||||| |||| |||||||||||||| ||||
Sbjct: 1560 cttacctcgcaaccacaaacaagtagacgaccacatgagagcaaccta 1513
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>ref|NM_192718.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1413

 Score =  105 bits (53), Expect = 1e-19
 Identities = 146/177 (82%)
 Strand = Plus / Minus

                                                                        
Query: 239  ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 298
            ||||||||||||||||||| |||||  |     |||||||| ||||  || |||||||||
Sbjct: 1347 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 1288

                                                                        
Query: 299  gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 358
            ||||| |||| | | ||| ||||  |||||||||||||||||   ||||||| |||||||
Sbjct: 1287 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 1228

                                                                     
Query: 359  caaagcgacggtgggtatggtgacgttgtcctggccgctgaagtcgaagcacgtgtc 415
            ||  |||||||| |||||| |||| |||||| ||||| |||||| ||||||||||||
Sbjct: 1227 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaagttgaagcacgtgtc 1171
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 146/177 (82%)
 Strand = Plus / Minus

                                                                            
Query: 239      ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 298
                ||||||||||||||||||| |||||  |     |||||||| ||||  || |||||||||
Sbjct: 24015986 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 24015927

                                                                            
Query: 299      gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 358
                ||||| |||| | | ||| ||||  |||||||||||||||||   ||||||| |||||||
Sbjct: 24015926 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 24015867

                                                                         
Query: 359      caaagcgacggtgggtatggtgacgttgtcctggccgctgaagtcgaagcacgtgtc 415
                ||  |||||||| |||||| |||| |||||| ||||| |||||| ||||||||||||
Sbjct: 24015866 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaagttgaagcacgtgtc 24015810
to top
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0090K04
          Length = 152556

 Score =  105 bits (53), Expect = 1e-19
 Identities = 146/177 (82%)
 Strand = Plus / Minus

                                                                          
Query: 239    ctgctgcacgttgccgatgatgccggtgcttccgtcgtcgccggtgtccgtgaacgcgag 298
              ||||||||||||||||||| |||||  |     |||||||| ||||  || |||||||||
Sbjct: 130508 ctgctgcacgttgccgatggtgccgaaggccttgtcgtcgcgggtgggcgcgaacgcgag 130449

                                                                          
Query: 299    gcagctgccgaatatgatcccgttggcgtcgaggtcgacgaccttgccgccgtcgaacac 358
              ||||| |||| | | ||| ||||  |||||||||||||||||   ||||||| |||||||
Sbjct: 130448 gcagccgccggacacgatgccgtgcgcgtcgaggtcgacgacggcgccgccggcgaacac 130389

                                                                       
Query: 359    caaagcgacggtgggtatggtgacgttgtcctggccgctgaagtcgaagcacgtgtc 415
              ||  |||||||| |||||| |||| |||||| ||||| |||||| ||||||||||||
Sbjct: 130388 cagcgcgacggtcggtatgctgaccttgtccaggccggtgaagttgaagcacgtgtc 130332
to top
>ref|XM_550548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 264
            |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1519 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1468
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                   
Query: 213     acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 264
               |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1062931 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1062982



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 213     acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 263
               |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 1154089 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1154039



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 213     acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 263
               |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 1137543 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1137493
to top
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0660D08
          Length = 146915

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                 
Query: 213   acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 264
             |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 39154 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 39205



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 213    acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 263
              |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 130312 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 130262



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 213    acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 263
              |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 113766 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 113716
to top
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J13
          Length = 152837

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 213    acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 264
              |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 125804 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 125855
to top
>dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C01, full
            insert sequence
          Length = 1886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 264
            |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1519 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1468
to top
>dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G18, full
            insert sequence
          Length = 1900

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccgg 264
            |||||||| | |||||| || ||| ||||||||||||||||||||| |||||
Sbjct: 1511 acgtcgtacaccacctccagcgtcttctgctgcacgttgccgatgaagccgg 1460
to top
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0542E10
          Length = 146196

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 263
            |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 6042 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 5992
to top
>dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E01, full
            insert sequence
          Length = 1389

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 213  acgtcgtagagcacctcaagggtcctctgctgcacgttgccgatgatgccg 263
            |||||||||||||||||  | |||  |||||||||||| ||||||| ||||
Sbjct: 1302 acgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagccg 1252
to top
>ref|XM_749710.1| Aspergillus fumigatus Af293 cell wall protein (Afu3g08110) partial
           mRNA
          Length = 1848

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 259 tgccggtgcttccgtcgtcgcc 280
           ||||||||||||||||||||||
Sbjct: 813 tgccggtgcttccgtcgtcgcc 834
to top
>ref|XM_467512.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1428

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 397  tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 445
            |||||||| |||| ||||||||||| | | | |||||||||| ||||||
Sbjct: 1210 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 1162
to top
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 324    gcgtcgaggtcgacgaccttgccgc 348
              ||||||||||||||||||| |||||
Sbjct: 473436 gcgtcgaggtcgacgacctcgccgc 473460
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 331     ggtcgacgaccttgccgccgt 351
               |||||||||||||||||||||
Sbjct: 1854323 ggtcgacgaccttgccgccgt 1854303
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 317     cccgttggcgtcgaggtcgacgacc 341
               |||||||||||||| ||||||||||
Sbjct: 4424790 cccgttggcgtcgatgtcgacgacc 4424814
to top
>dbj|AK108932.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-A08, full
           insert sequence
          Length = 1066

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 397 tgaagtcgaagcacgtgtccaggatgctcctggccggcgccgtcgggta 445
           |||||||| |||| ||||||||||| | | | |||||||||| ||||||
Sbjct: 301 tgaagtcgtagcaggtgtccaggatccccgtcgccggcgccgacgggta 253
to top
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete
             sequence
          Length = 160615

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   agcagcctagctagccaccct 122
             |||||||||||||||||||||
Sbjct: 84463 agcagcctagctagccaccct 84443
to top
>ref|NM_185090.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 691

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 ttggcgtcgaggtcgacgac 340
           ||||||||||||||||||||
Sbjct: 359 ttggcgtcgaggtcgacgac 340
to top
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12,
              complete sequence
          Length = 157069

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     tatattatggaactgaggaa 33
              ||||||||||||||||||||
Sbjct: 112119 tatattatggaactgaggaa 112138
to top
>ref|XM_370399.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein
            (MG06896.4) partial mRNA
          Length = 4419

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  tgctgcacgttgccgatgat 259
            ||||||||||||||||||||
Sbjct: 1637 tgctgcacgttgccgatgat 1618
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 321      ttggcgtcgaggtcgacgac 340
                ||||||||||||||||||||
Sbjct: 34587795 ttggcgtcgaggtcgacgac 34587814
to top
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     cgttgccgatgatgccggtg 266
               ||||||||||||||||||||
Sbjct: 1714102 cgttgccgatgatgccggtg 1714083
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 337     cgaccttgccgccgtcgaacacca 360
               |||||||||||||||||| |||||
Sbjct: 2144233 cgaccttgccgccgtcgaccacca 2144256



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 260     gccggtgcttccgtcgtcgccggt 283
               ||||||||| ||||||||||||||
Sbjct: 1035581 gccggtgctgccgtcgtcgccggt 1035604
to top
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence
          Length = 115857

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   agcctagctagccacccttc 124
             ||||||||||||||||||||
Sbjct: 85366 agcctagctagccacccttc 85347
to top
>ref|XM_787467.1| PREDICTED: Strongylocentrotus purpuratus similar to telomeric repeat
            binding factor a (LOC587756), mRNA
          Length = 1482

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   tgattttggcccacttggtg 59
            ||||||||||||||||||||
Sbjct: 1063 tgattttggcccacttggtg 1044
to top
>emb|AL355305.9| Human DNA sequence from clone RP11-487F23 on chromosome 6 Contains the 5'
              end of the gene for p53 regulated PA26 nuclear protein
              (PA26-T1), a novel gene and part of a novel gene, complete
              sequence
          Length = 185257

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 45     ttggcccacttggtgtcccttacc 68
              ||||||||||||||| ||||||||
Sbjct: 177619 ttggcccacttggtggcccttacc 177596
to top
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
             sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   ttggcgtcgaggtcgacgac 340
             ||||||||||||||||||||
Sbjct: 45512 ttggcgtcgaggtcgacgac 45531
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 260     gccggtgcttccgtcgtcgccggt 283
               ||||||||| ||||||||||||||
Sbjct: 3994431 gccggtgctgccgtcgtcgccggt 3994408
to top
>gb|AE011718.1| Xanthomonas axonopodis pv. citri str. 306,  section 96 of 469 of the
             complete genome
          Length = 12328

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 260   gccggtgcttccgtcgtcgccggt 283
             ||||||||| ||||||||||||||
Sbjct: 11490 gccggtgctgccgtcgtcgccggt 11513
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 247    cgttgccgatgatgccggtg 266
              ||||||||||||||||||||
Sbjct: 741089 cgttgccgatgatgccggtg 741108
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 14       tatattatggaactgaggaa 33
                ||||||||||||||||||||
Sbjct: 19511407 tatattatggaactgaggaa 19511426
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 321      ttggcgtcgaggtcgacgac 340
                ||||||||||||||||||||
Sbjct: 34677867 ttggcgtcgaggtcgacgac 34677886
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 312     atgatcccgttggcgtcgag 331
               ||||||||||||||||||||
Sbjct: 8108308 atgatcccgttggcgtcgag 8108289
to top
>gb|AE004807.1| Pseudomonas aeruginosa PAO1, section 368 of 529 of the complete
            genome
          Length = 10698

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 333  tcgacgaccttgccgccgtcgaacacca 360
            |||||| ||||||||||||||| |||||
Sbjct: 9245 tcgacgcccttgccgccgtcgagcacca 9218
to top
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete
             sequence
          Length = 129302

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   ttggcgtcgaggtcgacgac 340
             ||||||||||||||||||||
Sbjct: 55538 ttggcgtcgaggtcgacgac 55519
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 421     tgctcctggccggcgccgtc 440
               ||||||||||||||||||||
Sbjct: 2586595 tgctcctggccggcgccgtc 2586576
to top
>dbj|AK107563.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-C02, full
           insert sequence
          Length = 827

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 ttggcgtcgaggtcgacgac 340
           ||||||||||||||||||||
Sbjct: 369 ttggcgtcgaggtcgacgac 350
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 260     gccggtgcttccgtcgtcgccggt 283
               ||||||||| ||||||||||||||
Sbjct: 3996724 gccggtgctgccgtcgtcgccggt 3996701
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     cgttgccgatgatgccggtg 266
               ||||||||||||||||||||
Sbjct: 2118804 cgttgccgatgatgccggtg 2118823
to top
>emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 on chromosome 3, complete
              sequence
          Length = 125291

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    agcctagctagccacccttc 124
              ||||||||||||||||||||
Sbjct: 109803 agcctagctagccacccttc 109822


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,105,418
Number of Sequences: 3902068
Number of extensions: 3105418
Number of successful extensions: 58552
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 57438
Number of HSP's gapped (non-prelim): 1107
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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