>PRAM2_HUMAN (O60811) PRAME family member 2|
          Length = 474

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 366 VGEVPCPGCGADADQRISRHLC 301
           +G  PCP CG+   + +  HLC
Sbjct: 452 IGPTPCPSCGSSPSEELELHLC 473

>PRAM1_HUMAN (O95521) PRAME family member 1|
          Length = 474

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 366 VGEVPCPGCGADADQRISRHLC 301
           +G  PCP CG+   + +  HLC
Sbjct: 452 IGPTPCPSCGSSPSEELELHLC 473

>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)|
           (Transcriptional coactivator Aly/REF) (bZIP-enhancing
           factor BEF)
          Length = 256

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 6/33 (18%)
 Frame = -1

Query: 425 GGRRGKERSQPR------SAEELDAELEKYHAQ 345
           GG RG+ R   R      SAEELDA+L+ Y+A+
Sbjct: 220 GGARGRGRGAGRNSKQQLSAEELDAQLDAYNAR 252

>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export|
           factor-binding protein 1) (REF1-I) (Ally of AML-1 and
           LEF-1) (Aly/REF)
          Length = 254

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 6/33 (18%)
 Frame = -1

Query: 425 GGRRGKERSQPR------SAEELDAELEKYHAQ 345
           GG RG+ R   R      SAEELDA+L+ Y+A+
Sbjct: 218 GGSRGRGRGTGRNSKQQLSAEELDAQLDAYNAR 250

>POLS2_HUMAN (Q5K4E3) Polyserase-2 precursor (EC 3.4.21.-) (Polyserine protease|
           2) (Protease serine 36)
          Length = 855

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +2

Query: 161 LCRHITHTIQ*AKDLTSKRFCCPLNI-VAQKAGT*GHPSNFMLKISTLQRCRLIRWSASA 337
           L +H   +   A DL   +   P+N+  A +     HP ++ L  S   RCRL RW    
Sbjct: 397 LVQHENASWDNASDLALLQLRTPVNLSAASRPVCLPHPEHYFLPGS---RCRLARWGRGE 453

Query: 338 PHPGHG 355
           P  G G
Sbjct: 454 PALGPG 459

>YKN1_YEAST (P36067) Hypothetical 19.8 kDa protein in APL2-MYO3 intergenic|
           region
          Length = 173

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 351 CPGCGADADQRISRHLCSVDIFNMKFEGCPYVPAFC 244
           CPGC            C++D+ N+     P+VPA C
Sbjct: 77  CPGC------------CNMDVKNLDTVSLPFVPAIC 100


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,311,072
Number of Sequences: 219361
Number of extensions: 1189322
Number of successful extensions: 2859
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)