>UVRA_PSELE (P52087) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A) (Fragment)
          Length = 689

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
 Frame = +1

Query: 274 GLHPRDEAKTSLASSHQLKQFCSPLHQVSICLLFVQHAAW----GEQIDQRDG-----GP 426
           GLHP D  +  LA+  +LKQ  + L  V   L  ++HA W    G +  +  G     GP
Sbjct: 416 GLHPAD-TQALLAALDRLKQAGNSLFVVEHALGVIRHADWIVDVGPEAGEHGGRILYSGP 474

Query: 427 PCG 435
           P G
Sbjct: 475 PQG 477

>PRR3_MOUSE (Q811B5) Proline-rich protein 3 (MHC class I region proline-rich|
           protein CAT56)
          Length = 190

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 343 PLHQVSICLLFVQHAAWGEQIDQRDGGPPCGQLHAPPSAEGRPAAGRSA 489
           PL Q    L   +    G++ D+R  GPP   L  PP A G+P   +SA
Sbjct: 12  PLPQQQQHLALSERDEPGDEEDERPMGPP-SLLGPPPMANGKPGDPKSA 59


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,226,262
Number of Sequences: 219361
Number of extensions: 1591635
Number of successful extensions: 4160
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4156
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)