ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaet112b01 |
|---|---|
| Clone Library Name | barley_pub |
>NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048)| Length = 303 Score = 44.7 bits (104), Expect = 5e-05 Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 14/48 (29%) Frame = -3 Query: 391 RXFASXAPGVNPAAGL--PAG------------DPLLQDILMYWGKPF 290 R FA+ P +NPAA + PAG DPLLQDILMYWGKPF Sbjct: 257 RTFATVGP-INPAASILDPAGSGGLGGLGGGGSDPLLQDILMYWGKPF 303
>CUTL2_HUMAN (O14529) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1424 Score = 33.5 bits (75), Expect = 0.13 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 240 SAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTPGA 374 S P P +P T SQ G P ++ SG PA +P L+P A Sbjct: 660 SVPPSPPERPSLATASQNGAPALVKQEEGSGGPAQAPLPVLSPAA 704
>DSCL1_HUMAN (Q8TD84) Down syndrome cell adhesion molecule-like protein 1| precursor (Down syndrome cell adhesion molecule 2) Length = 2053 Score = 31.6 bits (70), Expect = 0.48 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = +3 Query: 18 PNQSHIHSLVQTHIHHDQVQY-SLRPSSNTPGLPRLIAAVRDSLYTIDT---FHPTATSI 185 P ++ I +L +T+ H Q ++ +L P+S + GLP A S T+ P + Sbjct: 1925 PREASIRNLARTY--HTQARHLTLDPASKSLGLPHPGAPAAASTATLPQRTLAMPAPPAG 1982 Query: 186 CCR*IPAARPSHPG*FPLSAAPKPHVQPP 272 P P+ P P +A P P +PP Sbjct: 1983 TAPPAPGPTPAEPPTAPSAAPPAPSTEPP 2011
>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)| Length = 1201 Score = 30.8 bits (68), Expect = 0.82 Identities = 30/92 (32%), Positives = 36/92 (39%), Gaps = 2/92 (2%) Frame = +3 Query: 90 PSSNTPGLPRLIAAVRDSLYTIDTFHPTATSICCR*IPAARPSHPG*FPLSAAPKPHVQP 269 P P P A S + HPTA+++ P PSHP LS P Sbjct: 977 PPRENPSHPTASALSTGSPPMKNPSHPTASALSTGSPPMKNPSHPTASTLSMG-----LP 1031 Query: 270 PSRTDSQKGLPQYMRMSWRSGSPA--GSPAAG 359 PSRT S S S SP+ GS A+G Sbjct: 1032 PSRTPSHPTATVLSTGSPPSESPSRTGSAASG 1063
>ZCH14_MOUSE (Q8VIG0) Zinc finger CCHC domain-containing protein 14 (BDG-29)| Length = 956 Score = 30.4 bits (67), Expect = 1.1 Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 11/110 (10%) Frame = +3 Query: 90 PSSNTPGLPRLIAAVRDSLYTIDT-----------FHPTATSICCR*IPAARPSHPG*FP 236 P++ +P I R +LYT +T P S C A+ SHP Sbjct: 665 PNNGQISVPPAIMNPRTALYTANTKVAFSAVSSVPVGPLQGSFCANSNTASPSSHPSTSF 724 Query: 237 LSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTPGAXEAN 386 S A P PS + + +P+ S+ SG AGS + G P + +++ Sbjct: 725 ASMASLPSCPAPSSSPALSSVPE---SSFYSGG-AGSSSPGNIPASSQSH 770
>PRD16_HUMAN (Q9HAZ2) PR domain zinc finger protein 16 (PR domain-containing| protein 16) (Transcription factor MEL1) Length = 1276 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = +3 Query: 201 PAARPSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTPGAXE 380 PA P PG FP S P+P + PP+ P + SP G+PA L Sbjct: 508 PALTPGFPGIFPPSLYPRPPLLPPTPLLKS---PLNHTQDAKLPSPLGNPALPLVSAVSN 564 Query: 381 AN 386 ++ Sbjct: 565 SS 566
>M3K14_MOUSE (Q9WUL6) Mitogen-activated protein kinase kinase kinase 14 (EC| 2.7.11.25) (NF-kappa beta-inducing kinase) (Serine/threonine-protein kinase NIK) Length = 942 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/68 (30%), Positives = 29/68 (42%) Frame = +3 Query: 54 HIHHDQVQYSLRPSSNTPGLPRLIAAVRDSLYTIDTFHPTATSICCR*IPAARPSHPG*F 233 H+ + LRP P L +LI+ ++ + HP AT P P+HP F Sbjct: 207 HLCFKKQDEGLRPVLPRPELHKLISPLQCLNHVWKLHHPQATG------PRPHPTHP--F 258 Query: 234 PLSAAPKP 257 P S P P Sbjct: 259 PYSGMPHP 266
>CBPA_DICDI (P35085) Calcium-binding protein| Length = 467 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/57 (28%), Positives = 23/57 (40%) Frame = +3 Query: 201 PAARPSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTPG 371 P +P PG +P +P PP Q+G+ + + G P P G PG Sbjct: 167 PPQQPGQPGAYPPQQPGQPGAYPP-----QQGVQNTLAKTGAPGQPGVPPPQGAYPG 218
>S39A6_MOUSE (Q8C145) Zinc transporter SLC39A6 precursor (Solute carrier family| 39 member 6) (Endoplamic reticulum membrane-linked protein) (Ermelin) Length = 765 Score = 29.6 bits (65), Expect = 1.8 Identities = 21/73 (28%), Positives = 32/73 (43%) Frame = +1 Query: 91 PPRTHRGSRVSSPPSVTPCTLLIPFIQRLRVSAVDRFRRLARVTPVDFLSQPRPNHTYSR 270 P R + S+PPS+T S V R RLAR + +S+PR + YSR Sbjct: 217 PGRRTKDVNPSTPPSIT------------EKSRVGRLSRLARKKSNESVSEPRKSFMYSR 264 Query: 271 RVGRILRKACPST 309 +++ +T Sbjct: 265 NTNDNIQECFNTT 277
>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response| factor 2) (ERF-2) Length = 492 Score = 29.3 bits (64), Expect = 2.4 Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = +3 Query: 204 AARPSHPG*F--PLSAAPKPHVQ-PPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTPG 371 AA PS P F P + P PPS DS Y+ S SGS +GS + L PG Sbjct: 420 AAPPSPPFSFQLPRRLSDSPVFDAPPSPPDSLSDRDSYLSGSLSSGSLSGSESPSLDPG 478
>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:| Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)] Length = 676 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 1/65 (1%) Frame = +3 Query: 201 PAARPSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAG-LTPGAX 377 P P PG P A P P PP+ Q P + + PAG P G +PG Sbjct: 399 PPPGPPPPGPAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAGPPPPGPPSPGPA 458 Query: 378 EANXR 392 R Sbjct: 459 PPGAR 463
>PERL_HUMAN (P22079) Lactoperoxidase precursor (EC 1.11.1.7) (LPO) (Salivary| peroxidase) (SPO) Length = 712 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = +2 Query: 233 SSLSRAQTTRTAAESDGFSERLAPVHEDVLEER 331 +S +RAQTTRT+A SD S+ V++ L+ R Sbjct: 21 ASTTRAQTTRTSAISDTVSQAKVQVNKAFLDSR 53
>RNFC_HAEDU (Q7VNT4) Electron transport complex protein rnfC| Length = 702 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = +2 Query: 212 PESPRLISSLSRAQTTRTAAESDGFSERLAPVHEDVLEERVAGRQPRRRVDAR 370 P + ++L+RA+ +TA ++DG + +AP +E + A R AR Sbjct: 566 PRKAAVAAALARAKAKKTAQQADGLAAEVAPENEIADPRKAAVAAALARAKAR 618
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 2/60 (3%) Frame = +3 Query: 201 PAARPSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWR--SGSPAGSPAAGLTPGA 374 P +P P S +PKP +P R GLP R R +G G+P G P A Sbjct: 164 PKPKPGAP-----SKSPKPGARPGPRPGGSAGLPSAARPGPRPGAGRRTGAPRPGNNPFA 218 Score = 27.3 bits (59), Expect = 9.0 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 1/96 (1%) Frame = +3 Query: 87 RPSSNTPGLPRLIAAVRDSLYTIDTFHPTATSICCR*IPAARP-SHPG*FPLSAAPKPHV 263 RP S++ P +A R S ++ + + PAA+P S P P PKPH Sbjct: 102 RPGSSSGPKPGRSSAARTSATPRPGLIKSSGASSQQEPPAAKPESKPTPKPGQNVPKPHA 161 Query: 264 QPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTPG 371 P + G+P+ SP G PG Sbjct: 162 PAPKP---------------KPGAPSKSPKPGARPG 182
>XERD_PSEAE (Q9HXQ6) Tyrosine recombinase xerD| Length = 298 Score = 28.1 bits (61), Expect = 5.3 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 1/91 (1%) Frame = -3 Query: 349 GLPAGDPLLQDILMYWGKPF*ESVRLGGCTCGLGAAERGNQPG*LGRAAGIYRQQILVAV 170 GL A DP LQ L GKP +S+ L A E + G R ++L A Sbjct: 91 GLIAEDPTLQVDLPQLGKPLPKSLSEADVEALLAAPEVDDPLGLRDRT----MLEVLYAC 146 Query: 169 G*KVS-IVYKESRTAAMRRGSPGVFEEGRKE 80 G +VS +V +R+G VF +G KE Sbjct: 147 GLRVSELVGLTLEQVNLRQGVVKVFGKGSKE 177
>CEBPB_BOVIN (O02755) CCAAT/enhancer-binding protein beta (C/EBP beta)| Length = 348 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +3 Query: 219 HPG*FPLSAAPKPHVQPPSRTDSQKGL-PQYMRMSWRSGSPAGSPAAGLTPG 371 HPG F P P PP+ ++ G P + +G+P G AAG+ G Sbjct: 153 HPGCFAPLHPPPPPPPPPAELKAEPGFEPADCKRKEEAGAPGGG-AAGMAAG 203
>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1887 Score = 28.1 bits (61), Expect = 5.3 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Frame = +3 Query: 159 TFHPTATSICCR*IPAARPSHPG*FPLSAAP--------KPHVQPPSRTDSQKGLPQYMR 314 +F P+A S P+ P+HPG P S P P V P S P Y Sbjct: 1533 SFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTS----PNYTA 1588 Query: 315 MSWRSGSPAGSPAA 356 S SP SP++ Sbjct: 1589 SSPGGASPNYSPSS 1602
>DLG4_RAT (P31016) Discs large homolog 4 (Postsynaptic density protein 95)| (PSD-95) (Synapse-associated protein 90) (SAP90) Length = 724 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +2 Query: 230 ISSLSRAQTTRTAAESDGFSERLAPVHEDVLEERVAGRQPRRRVDARGGGG 382 IS S T A + R +PV +D+L E R+PRR V RG G Sbjct: 272 ISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTG 322
>DLG4_MOUSE (Q62108) Discs large homolog 4 (Postsynaptic density protein 95)| (PSD-95) (Synapse-associated protein 90) (SAP90) Length = 724 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +2 Query: 230 ISSLSRAQTTRTAAESDGFSERLAPVHEDVLEERVAGRQPRRRVDARGGGG 382 IS S T A + R +PV +D+L E R+PRR V RG G Sbjct: 272 ISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTG 322
>DLG4_HUMAN (P78352) Discs large homolog 4 (Postsynaptic density protein 95)| (PSD-95) (Synapse-associated protein 90) (SAP90) Length = 724 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +2 Query: 230 ISSLSRAQTTRTAAESDGFSERLAPVHEDVLEERVAGRQPRRRVDARGGGG 382 IS S T A + R +PV +D+L E R+PRR V RG G Sbjct: 272 ISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRGSTG 322
>P30_MYCPN (P75330) P30 adhesin (Cytadhesin P30) (30 kDa adhesin-related| protein) Length = 274 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 213 PSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTP 368 P HPG AP+P P + G+P + M+ R G P P G+ P Sbjct: 210 PPHPG-----MAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFP---PQPGMAP 253 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/52 (32%), Positives = 23/52 (44%) Frame = +3 Query: 213 PSHPG*FPLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTP 368 P HPG AP+P P + G+P + M+ R G P P G+ P Sbjct: 186 PPHPG-----MAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFP---PQPGMAP 229
>SLAP1_THET8 (Q5SH37) S-layer protein precursor (P100 protein) (Surface layer| protein) Length = 928 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = +3 Query: 234 PLSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSGSPAGSPAAGLTPG 371 PLS + H P D Q G+ + ++ G AG+P T G Sbjct: 561 PLSLSANYHAVDPQYADGQAGMSENEDTTYYGGEKAGAPYGADTRG 606
>CABIN_RAT (O88480) Calcineurin-binding protein Cabin 1 (Calcineurin| inhibitor) (CAIN) Length = 2182 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +1 Query: 55 IYTMTKYSTLCVPPRTHRGSRVSSPPSVTPCTLLIPFIQRLRVSAV 192 + M + T C PPR G R+ P LL P I VS V Sbjct: 277 LLAMYNHLTTCEPPRPSLGKRIDLSDYQDPSQLLAPSIVVTPVSVV 322
>PSD_ZYMMO (Q9X5E3) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)| [Contains: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain] Length = 246 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/51 (29%), Positives = 19/51 (37%), Gaps = 12/51 (23%) Frame = -3 Query: 145 KESRTAAMRRGSPGVFEEGRK------------EYCTWSWCIWV*TKLCIC 29 K S ++R P + EGRK Y +W W W LC C Sbjct: 8 KNSAAQSIRWHFPSIHPEGRKFFVIAVIISAIITYFSWLWMAWPLGVLCFC 58
>AK_CHLPN (Q9Z6L0) Aspartokinase (EC 2.7.2.4) (Aspartate kinase)| Length = 440 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 158 YLSSNGYEYLLSIDSGGSPESPRLISSLSRAQTTRTAAESDG 283 ++ SNG + + GGS S LI+ L+RA R + +G Sbjct: 172 FIGSNGLGETVLLGRGGSDYSATLIAELARATEVRIYTDVNG 213
>ISTA_SHISO (P16944) Transposase for insertion sequence element IS640| Length = 315 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = -2 Query: 215 RASRRNLSTADTRSRWMKGINSVQGVTDGGDETREPRCVRGGTQR 81 R R+ T + RSRW + I SV G R P CV G R Sbjct: 268 RELRQFKETPEQRSRWSRNICSVTGYRLRYQLLRYPPCVLGQLYR 312
>SL9A5_HUMAN (Q14940) Sodium/hydrogen exchanger 5 (Na(+)/H(+) exchanger 5)| (NHE-5) (Solute carrier family 9 member 5) Length = 896 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 237 LSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSG 332 L P P + PPS T ++K LP W+SG Sbjct: 742 LEVCPSPRIIPPSPTCAEKELP------WKSG 767
>PEX5_PICAN (Q01495) Peroxisomal targeting signal receptor (Peroxisomal protein| PAH2) (Peroxin-5) (PTS1 receptor) Length = 569 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -1 Query: 324 SKTSSCTGASLSENPSDSAAVRVVWARLREEINRGDSGEPPESIDS 187 SKT C A++ NP+D+ A W RL + +S +P ++I++ Sbjct: 433 SKTLDCFQAAIEHNPNDALA----WNRLGASL--ANSNKPEQAIEA 472
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 27.3 bits (59), Expect = 9.0 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 4/76 (5%) Frame = +3 Query: 168 PTATSICCR*IPAARPSHPG*FPLSAAPKPHV-QPPSRTDSQKGLPQYMRMS---WRSGS 335 PT I P ARPSHPG P+S A + S GL + M G+ Sbjct: 494 PTRVVIARPTPPQARPSHPGGPPVSGALGAGLGTNTSLAQMVSGLVGQLLMQPVLVAQGT 553 Query: 336 PAGSPAAGLTPGAXEA 383 P +PA+ P +A Sbjct: 554 PGMAPASASAPATAQA 569
>HDAC4_HUMAN (P56524) Histone deacetylase 4 (HD4)| Length = 1084 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 309 CTGASLSENPSDSAAVRVVWARLREEINRG 220 CT S S +P + ++ +W+RL+E RG Sbjct: 667 CTCGSSSSHPEHAGRIQSIWSRLQETGLRG 696
>VGLX_PRVRI (P07562) Secreted glycoprotein GX| Length = 498 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = -1 Query: 348 GCRPATRSSKTSSCTGAS--LSENPSDSAAVRVVWARLREEINRGDSGEPPE 199 GC P+T + T A LS++ +D V + + +E+ GD+ E PE Sbjct: 214 GCFPSTDEGAWENVTAAEKGLSDDYADYYDVHIFRSESDDEVVHGDAPEAPE 265
>CAPP_RALSO (Q8XWW2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 985 Score = 27.3 bits (59), Expect = 9.0 Identities = 23/60 (38%), Positives = 26/60 (43%) Frame = +2 Query: 197 DSGGSPESPRLISSLSRAQTTRTAAESDGFSERLAPVHEDVLEERVAGRQPRRRVDARGG 376 D E RL+ +LSR QTT FS LA + ED R RRRV A G Sbjct: 100 DRQAEQELDRLLKTLSRDQTTSVVRAFSYFS-HLANIAEDQHHNR------RRRVHALAG 152
>PCD15_HUMAN (Q96QU1) Protocadherin-15 precursor| Length = 1955 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 198 IPAARPSHPG*FPLSAAPKPHVQPP 272 +PAA+P+ P P++A P P PP Sbjct: 1419 LPAAKPAVPAPAPVAAPPPPPPPPP 1443
>CREA_ASPOR (Q9P889) DNA-binding protein creA (Carbon catabolite repressor)| Length = 429 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +3 Query: 36 HSLVQTHIHHDQVQYSLRPSSNTPGLPRLIAAVRDSLYTIDTFHPTATSICCR*IPAARP 215 HS+ ++H H D+ Y+ R + P P A ++ D+ PT P A P Sbjct: 269 HSMSRSHSHEDEDGYTHRVKRSRPNSPN-STAPSSPTFSHDSLSPTPDH-----TPLATP 322 Query: 216 SH 221 +H Sbjct: 323 AH 324
>SL9A5_RAT (Q9Z0X2) Sodium/hydrogen exchanger 5 (Na(+)/H(+) exchanger 5)| (NHE-5) (Solute carrier family 9 member 5) Length = 898 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 237 LSAAPKPHVQPPSRTDSQKGLPQYMRMSWRSG 332 L P P + PPS T ++K LP W+SG Sbjct: 744 LEVCPSPRIIPPSPTCAEKELP------WKSG 769
>FREM2_HUMAN (Q5SZK8) FRAS1-related extracellular matrix protein 2 precursor (ECM3| homolog) Length = 3169 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 215 RASRRNLSTADTRSRWMKGINSVQGVT 135 +A NLS +D W G N++QGVT Sbjct: 1028 KADSFNLSLSDMSQEWRIGGNTIQGVT 1054
>VILI_DICDI (P36418) Protovillin (100 kDa actin-binding protein)| Length = 959 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/42 (33%), Positives = 17/42 (40%) Frame = -2 Query: 266 LYVWFGRG*ERKSTGVTRASRRNLSTADTRSRWMKGINSVQG 141 LYVW G+ V A+ +L D R W I QG Sbjct: 352 LYVWLGKASANDQRTVAMANAMDLLHEDNRPSWTPIIKMTQG 393
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -1 Query: 324 SKTSSCTG-ASLSENPSDSAAVRVVWARLREEINRGDSGEP 205 SKTS TG S ENPS A+ RV + R + G P Sbjct: 1250 SKTSVDTGQVSRPENPSQPASPRVAKCKARSPVRLPHEGSP 1290
>KG1Z_YEAST (P53233) Probable serine/threonine-protein kinase YGR052W (EC| 2.7.11.1) Length = 369 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +2 Query: 176 YEYLLSIDSGGSPESPRLISSLSRAQTTRTAAESDGFSERLAPVHEDVLEERV 334 Y++L S GSP SP LI + + + + F+ L H D+ E + Sbjct: 88 YDFLDIAKSQGSPSSPSLI-QIDMQKIIKQLCSAISFAHSLGIAHRDIKPENI 139
>CORT_MOUSE (P56469) Cortistatin precursor [Contains: Cortistatin-14]| Length = 109 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = +3 Query: 234 PLSAAPKPHVQPPSRTDSQKGLPQYMRM--SWRSGSPAGSPAAGLTPGAXEANXR 392 PL + P T+ + GL ++ W S + + +P G TPG ++ R Sbjct: 29 PLESGPTGQDSVQEATEGRSGLLTFLAWWHEWASQASSSTPVGGGTPGLSKSQER 83 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,239,082 Number of Sequences: 219361 Number of extensions: 1341634 Number of successful extensions: 5075 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4775 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5067 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
