ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet112a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
114KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 84 2e-16
2CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 79 5e-15
3PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 67 2e-11
4HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly... 58 1e-08
5DGAT1_MOUSE (Q9Z2A7) Diacylglycerol O-acyltransferase 1 (EC 2.3.... 30 3.8
6O2T11_HUMAN (Q8NH01) Olfactory receptor 2T11 (Olfactory receptor... 30 3.8
7XRN1_YEAST (P22147) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Stran... 29 4.9
8PALI_EMENI (O93956) pH-response regulator protein palI/RIM9 29 6.4

>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 37/53 (69%), Positives = 44/53 (83%)
 Frame = -3

Query: 447 CCSLLGGLADLEAAVCLCTALKANVLGIVLNIPVKLSLLLNYCGKTAPKGFQC 289
           CCSLL GL +LEAAVCLCTA+KAN+LG  LN+P+ LSL+LN CGK  P GF+C
Sbjct: 84  CCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALSLVLNNCGKQVPNGFEC 136



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 79.0 bits (193), Expect = 5e-15
 Identities = 33/55 (60%), Positives = 44/55 (80%)
 Frame = -3

Query: 453 DKCCSLLGGLADLEAAVCLCTALKANVLGIVLNIPVKLSLLLNYCGKTAPKGFQC 289
           ++CC LL GL DL+AA+CLCTA+KANVLGI LN+P+ L+ +LN CG+  P+ F C
Sbjct: 73  EQCCPLLEGLVDLDAALCLCTAIKANVLGIHLNVPLSLNFILNNCGRICPEDFTC 127



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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 27/53 (50%), Positives = 39/53 (73%)
 Frame = -3

Query: 447 CCSLLGGLADLEAAVCLCTALKANVLGIVLNIPVKLSLLLNYCGKTAPKGFQC 289
           CC LLGGL DL+AA+CLCT ++  +L I + +P+ L +L++ CGK  PK F+C
Sbjct: 291 CCPLLGGLVDLDAAICLCTTIRLKLLNINIILPIALQVLIDDCGKYPPKDFKC 343



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>HPSE_SOYBN (P24337) Hydrophobic seed protein (HPS) (Allergen Gly m 1)|
          Length = 80

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%)
 Frame = -3

Query: 453 DKCCSLLGGLADLEAAVCLCTALKANVLGIVLNIPVKLSLLLNYCGKTAPKGFQC 289
           D CC+L+GGL D+EA VCLC  L+A  LGI LN+   L L+LN CG++ P    C
Sbjct: 26  DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNLQLILNSCGRSYPSNATC 77



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>DGAT1_MOUSE (Q9Z2A7) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 498

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
 Frame = -1

Query: 224 PCMYVV--IFFSRSFQI*FHHAIGRLLSSFSFVRACVHLYALVNLVTLICLSLAV-YYVQ 54
           PC+ +   IF   +FQI    A+G L            L  +VNL T+IC   AV   V+
Sbjct: 143 PCVIIASNIFVVAAFQIEKRLAVGALTEQMGL------LLHVVNLATIICFPAAVALLVE 196

Query: 53  EIHTIGCVCVL 21
            I  +G V  L
Sbjct: 197 SITPVGSVFAL 207



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>O2T11_HUMAN (Q8NH01) Olfactory receptor 2T11 (Olfactory receptor OR1-65)|
          Length = 316

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = -3

Query: 366 IVLNIPVKLSLLLNYCGKTAPKGFQCA*IHLPLNQSKACMHASPVHASMHVCCYLL*SFI 187
           I +N+P        YCG  +   F C    +P     AC   S     M++CC L+   I
Sbjct: 159 ITMNVP--------YCGSRSINHFFC---EIPAVLKLACADTSLYETLMYICCVLM-LLI 206

Query: 186 PNLISSCNRSVV 151
           P  I S + S++
Sbjct: 207 PISIISTSYSLI 218



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>XRN1_YEAST (P22147) 5'-3' exoribonuclease 1 (EC 3.1.11.-) (Strand exchange|
           protein 1) (KAR(-)-enhancing mutation protein) (5'-3'
           exoribonuclease) (DNA strand transfer protein beta)
           (STP-beta) (p175)
          Length = 1528

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 2   LNQITVEAHTRTQSYVSLVRSTQPN*DKLM-SPN*PVHIN-EHTHARTKNYLTTDRLHDE 175
           L +++ E  TR Q    L+ S  P  D L  SP   +  + EH H   K Y+T      E
Sbjct: 660 LRKLSPEEKTRNQFGKDLIYSFNPQVDNLYKSPLGGIFSDIEHNHCVEKEYITIPLDSSE 719

Query: 176 IKFGM 190
           I++G+
Sbjct: 720 IRYGL 724



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>PALI_EMENI (O93956) pH-response regulator protein palI/RIM9|
          Length = 549

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 26  HTRTQSYVSLVRSTQPN*DKLMSPN*PVHINEHTHARTKN 145
           ++RTQSYV   R+  P   +   PN P   N+  HAR+++
Sbjct: 474 YSRTQSYVPPRRNWGPQAYQSSEPNLPYQPNQPRHARSQS 513


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,638,269
Number of Sequences: 219361
Number of extensions: 954151
Number of successful extensions: 1952
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1949
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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