| Clone Name | rbaet112a04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtcg 447 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 7094786 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtcg 7094845 Query: 448 aacttgtcgggtgttgtcgggtcgaggtcgtt 479 || ||| || || |||||||| |||||||| Sbjct: 7094846 aaggcgtccggcgtggtcgggtccaggtcgtt 7094877 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 271 atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327 ||||||||||| |||| |||||| | |||||| |||||||||||| | ||||||| Sbjct: 7094675 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 7094731
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtcg 447 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 7092681 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtcg 7092740 Query: 448 aacttgtcgggtgttgtcgggtcgaggtcgtt 479 || ||| || || |||||||| |||||||| Sbjct: 7092741 aaggcgtccggcgtggtcgggtccaggtcgtt 7092772 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Plus Query: 271 atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327 ||||||||||| |||| |||||| | |||||| |||||||||||| | ||||||| Sbjct: 7092570 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 7092626
>gb|AC137696.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0049C20, from chromosome 3, complete sequence Length = 136098 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtcg 447 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 99552 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtcg 99493 Query: 448 aacttgtcgggtgttgtcgggtcgaggtcgtt 479 || ||| || || |||||||| |||||||| Sbjct: 99492 aaggcgtccggcgtggtcgggtccaggtcgtt 99461 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327 ||||||||||| |||| |||||| | |||||| |||||||||||| | ||||||| Sbjct: 99663 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 99607
>dbj|AK104936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G10, full insert sequence Length = 1202 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtcg 447 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 938 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtcg 879 Query: 448 aacttgtcgggtgttgtcgggtcgaggtcgtt 479 || ||| || || |||||||| |||||||| Sbjct: 878 aaggcgtccggcgtggtcgggtccaggtcgtt 847 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327 ||||||||||| |||| |||||| | |||||| |||||||||||| | ||||||| Sbjct: 1049 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 993
>dbj|AK068353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013142D12, full insert sequence Length = 1201 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtcg 447 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 939 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtcg 880 Query: 448 aacttgtcgggtgttgtcgggtcgaggtcgtt 479 || ||| || || |||||||| |||||||| Sbjct: 879 aaggcgtccggcgtggtcgggtccaggtcgtt 848 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327 ||||||||||| |||| |||||| | |||||| |||||||||||| | ||||||| Sbjct: 1050 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 994
>tpe|BN000568.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx39 gene for class III peroxidase 39 precursor, exons 1-4 Length = 2005 Score = 87.7 bits (44), Expect = 3e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 388 tcctggtcggactggaggaagccacggttcaccttcaggttggtgaagtagttcttgtcg 447 ||||||||||||||||||||||| |||||||||| | ||||| |||||||||||||||| Sbjct: 1830 tcctggtcggactggaggaagccgcggttcacctcgatgttggcgaagtagttcttgtcg 1771 Query: 448 aacttgtcgggtgttgtcgggtcgaggtcgtt 479 || ||| || || |||||||| |||||||| Sbjct: 1770 aaggcgtccggcgtggtcgggtccaggtcgtt 1739 Score = 42.1 bits (21), Expect = 1.7 Identities = 48/57 (84%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcatggaatttgcgaaggccttgaagaaggcgtcctggctg 327 ||||||||||| |||| |||||| | |||||| |||||||||||| | ||||||| Sbjct: 1941 atgttccccatgttgaccatggacctggcgaagctcttgaagaaggccttctggctg 1885
>ref|NM_194553.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0015O22.19), mRNA Length = 1011 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 912 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 853 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 852 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 793 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 792 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 742
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 635109 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 635168 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 635169 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 635228 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 635229 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 635279 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 461759 atgttccccatcttgatcat 461778
>gb|AC068654.2| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0015O22 From Chromosome 10, complete sequence Length = 189349 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 102717 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 102776 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 102777 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 102836 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 102837 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 102887
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 635109 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 635168 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 635169 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 635228 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 635229 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 635279 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 461759 atgttccccatcttgatcat 461778
>dbj|AK104730.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-C06, full insert sequence Length = 1447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 971 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 912 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 911 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 852 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 851 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 801
>dbj|AK104633.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C08, full insert sequence Length = 1382 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 906 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 847 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 846 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 787 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 786 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 736
>dbj|AK061462.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B11, full insert sequence Length = 1447 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 971 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 912 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 911 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 852 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 851 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 801
>gb|AY110228.1| Zea mays CL32412_1 mRNA sequence Length = 1199 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Plus Query: 235 cggacttctcccttggaggggtccgttatcacccttatgttccccatcttgatcatggaa 294 ||||||||||| |||| |||||||| | | | | ||||||||||| ||||||||||| Sbjct: 239 cggacttctcctctggacgggtccgtgagcggcttgatgttccccatgttgatcatggac 298 Query: 295 tttgcgaaggccttgaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgcc 354 | |||||| | ||||||| |||| |||||| |||||||| |||||||||| |||||| Sbjct: 299 tgcgcgaagctcgcgaagaagtcgtcttggctggccgcgaactggtcgacgatgggcgcc 358 Query: 355 gttgtccccaccgcgagtgggtcagacttgagttcctggtcggactggaggaagccacgg 414 || || ||| ||| || || |||||||| ||||||||||| | ||||| ||| ||| Sbjct: 359 gtggtgccctgcgctaggggcgacgacttgagctcctggtcggagttgaggatgcctcgg 418 Query: 415 ttcacct 421 ||||||| Sbjct: 419 ttcacct 425
>tpe|BN000654.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx125 gene for class III peroxidase 125 precursor, exons 1-3 Length = 2806 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Minus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 2707 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 2648 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 2647 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 2588 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 2587 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 2537
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 138/171 (80%) Strand = Plus / Plus Query: 309 gaagaaggcgtcctggctgcccgcgaaccggtcgacgattggcgccgttgtccccaccgc 368 |||||||||| |||||||| ||||| ||||||||||| |||||||| ||||| ||| Sbjct: 635106 gaagaaggcggcctggctggtggcgaagcggtcgacgatgggcgccgtcgtcccggtcgc 635165 Query: 369 gagtgggtcagacttgagttcctggtcggactggaggaagccacggttcaccttcaggtt 428 || | |||||||| |||||||| |||||||||||||| ||||| |||| | ||| Sbjct: 635166 ctccggcgccgacttgagctcctggtccgactggaggaagccgcggttgacctcgatgtt 635225 Query: 429 ggtgaagtagttcttgtcgaacttgtcgggtgttgtcgggtcgaggtcgtt 479 |||| |||||| |||||||| |||| || || |||||||| |||||||| Sbjct: 635226 ggtgtagtagtggttgtcgaaggtgtccggcgtcgtcgggtccaggtcgtt 635276 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 461756 atgttccccatcttgatcat 461775
>gb|M32742.1|CUSCUPER C.sativus peroxidase (put.) (CuPer2) mRNA, 3'end Length = 1126 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 424 aggttggtgaagtagttcttgtcgaacttgt 454 ||||| ||| ||||||||||||||||||||| Sbjct: 674 aggtttgtgtagtagttcttgtcgaacttgt 644
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2322170 acacgcacatcagatgccacac 2322149
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2401383 acacgcacatcagatgccacac 2401362
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2330622 acacgcacatcagatgccacac 2330601
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2341277 acacgcacatcagatgccacac 2341256
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2394489 acacgcacatcagatgccacac 2394468
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2343065 acacgcacatcagatgccacac 2343044
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2331883 acacgcacatcagatgccacac 2331862
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2430610 acacgcacatcagatgccacac 2430589
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 146 acacgcacatcagatgccacac 167 |||||||||||||||||||||| Sbjct: 2281728 acacgcacatcagatgccacac 2281707 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 cgaatgaaatgtgtacatttg 80 ||||||||||||||||||||| Sbjct: 803612 cgaatgaaatgtgtacatttg 803632
>ref|XM_522898.1| PREDICTED: Pan troglodytes similar to WD repeat domain 21 isoform 2 (LOC467501), mRNA Length = 1782 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 414 gttcaccttcaggttggtgaagtag 438 |||||||||| |||||||||||||| Sbjct: 780 gttcaccttccggttggtgaagtag 756
>gb|BT017640.1| Zea mays clone EL01N0438G07.c mRNA sequence Length = 768 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 gaaggccttgaagaaggcgtcctgg 324 ||||||| ||||||||||||||||| Sbjct: 425 gaaggccctgaagaaggcgtcctgg 401
>gb|AY857761.1| Triticum monococcum peroxidase 7 (POX7) mRNA, complete cds Length = 1319 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 gaaggccttgaagaaggcgtcctgg 324 ||||||| ||||||||||||||||| Sbjct: 985 gaaggccctgaagaaggcgtcctgg 961
>emb|AJ849350.1| Staphylococcus aureus partial tpi71 gene for triosephosphate isomerase Length = 402 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 cgaatgaaatgtgtacatttg 80 ||||||||||||||||||||| Sbjct: 242 cgaatgaaatgtgtacatttg 262
>emb|AJ849348.1| Staphylococcus aureus partial tpi67 gene for triosephosphate isomerase Length = 402 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 cgaatgaaatgtgtacatttg 80 ||||||||||||||||||||| Sbjct: 242 cgaatgaaatgtgtacatttg 262
>gb|AC122290.4| Mus musculus BAC clone RP23-254P19 from chromosome 14, complete sequence Length = 163287 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 98 ttattgcactgaacaataaaa 118 ||||||||||||||||||||| Sbjct: 107271 ttattgcactgaacaataaaa 107291
>emb|CR457441.5| Zebrafish DNA sequence from clone CH211-181D7 in linkage group 15, complete sequence Length = 135398 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 58 cacgaatgaaatgtgtacatt 78 ||||||||||||||||||||| Sbjct: 71227 cacgaatgaaatgtgtacatt 71247
>emb|CR713387.2|CNS0GDEF Tetraodon nigroviridis full-length cDNA Length = 613 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 ttgaaatgactttttagactt 32 ||||||||||||||||||||| Sbjct: 546 ttgaaatgactttttagactt 526
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 426 gttggtgaagtagttcttgtcgaac 450 |||||||||||| |||||||||||| Sbjct: 4009044 gttggtgaagtacttcttgtcgaac 4009020
>gb|AY032674.1| Nicotiana tabacum peroxidase (PER9-6) mRNA, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 ccccatcttgatcatggaatt 296 ||||||||||||||||||||| Sbjct: 950 ccccatcttgatcatggaatt 930
>gb|AY106563.1| Zea mays PCO123005 mRNA sequence Length = 628 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 300 gaaggccttgaagaaggcgtcctgg 324 ||||||| ||||||||||||||||| Sbjct: 383 gaaggccctgaagaaggcgtcctgg 407
>emb|AL929123.9| Mouse DNA sequence from clone RP23-328K3 on chromosome 4, complete sequence Length = 208830 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 tcaggttggtgaagtagttct 442 ||||||||||||||||||||| Sbjct: 19031 tcaggttggtgaagtagttct 19051
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 299 cgaaggccttgaagaaggcg 318 |||||||||||||||||||| Sbjct: 1099502 cgaaggccttgaagaaggcg 1099521
>ref|NM_120756.2| Arabidopsis thaliana peroxidase AT5G06730 mRNA, complete cds Length = 1392 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 1010 atgttccccatcttgatcat 991
>ref|NM_194528.1| Oryza sativa (japonica cultivar-group) putative copia-type polyprotein (OSJNBa0065H03.10), mRNA Length = 4053 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 3986 atgttccccatcttgatcat 3967
>ref|XM_478980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 770 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 agccacggttcaccttcagg 426 |||||||||||||||||||| Sbjct: 456 agccacggttcaccttcagg 437
>gb|AC037197.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0065H03, complete sequence Length = 141017 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 65933 atgttccccatcttgatcat 65952
>gb|AY857760.1| Triticum monococcum peroxidase 6 (POX6) mRNA, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 971 atgttccccatcttgatcat 952
>gb|AC150309.1| Latimeria menadoensis clone VMRC4-39G19, complete sequence Length = 196157 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 atgtgtacatttggttgaca 87 |||||||||||||||||||| Sbjct: 120476 atgtgtacatttggttgaca 120457
>ref|NM_181340.1| Homo sapiens WD repeat domain 21A (WDR21A), transcript variant 2, mRNA Length = 2461 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ttcaccttcaggttggtgaagtag 438 ||||||||| |||||||||||||| Sbjct: 758 ttcaccttccggttggtgaagtag 735
>ref|NM_015604.2| Homo sapiens WD repeat domain 21A (WDR21A), transcript variant 1, mRNA Length = 2563 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ttcaccttcaggttggtgaagtag 438 ||||||||| |||||||||||||| Sbjct: 858 ttcaccttccggttggtgaagtag 835
>gb|AY519360.1| Arabidopsis thaliana peroxidase ATP29a gene, complete cds Length = 1414 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 1284 atgttccccatcttgatcat 1265
>ref|XM_547889.2| PREDICTED: Canis familiaris similar to WD repeat domain 21A isoform 1 (LOC490767), mRNA Length = 1593 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 gttcaccttcaggttggtgaagta 437 |||||||||| ||||||||||||| Sbjct: 789 gttcaccttccggttggtgaagta 766
>emb|CR382378.12| Zebrafish DNA sequence from clone DKEYP-40G12 in linkage group 7, complete sequence Length = 198471 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gaatgaaatgtgtacatttg 80 |||||||||||||||||||| Sbjct: 191288 gaatgaaatgtgtacatttg 191269
>emb|AL354771.14| Human DNA sequence from clone RP11-545P21 on chromosome 1q25.1-31.1 Contains part of the gene for DBCCR1-like (DBCCR1L) and part of a novel gene, complete sequence Length = 150195 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 ccaattattgcactgaacaataaa 117 ||||||||||||||||| |||||| Sbjct: 5120 ccaattattgcactgaaaaataaa 5097
>emb|Y11794.1|ATP29A A.thaliana mRNA for peroxidase ATP29a, partial Length = 753 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 314 atgttccccatcttgatcat 295
>gb|BT008584.1| Arabidopsis thaliana clone U51349 putative peroxidase (At5g06730) mRNA, complete cds Length = 1108 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 947 atgttccccatcttgatcat 928
>emb|AL080157.1|HSM800674 Homo sapiens mRNA; cDNA DKFZp434K114 (from clone DKFZp434K114) Length = 2915 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ttcaccttcaggttggtgaagtag 438 ||||||||| |||||||||||||| Sbjct: 674 ttcaccttccggttggtgaagtag 651
>dbj|AK027745.1| Homo sapiens cDNA FLJ14839 fis, clone OVARC1001791 Length = 2374 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ttcaccttcaggttggtgaagtag 438 ||||||||| |||||||||||||| Sbjct: 748 ttcaccttccggttggtgaagtag 725
>dbj|AK139392.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830040L08 product:unclassifiable, full insert sequence Length = 2968 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aacattgaaatgacttttta 27 |||||||||||||||||||| Sbjct: 1561 aacattgaaatgacttttta 1542
>gb|AC011631.6|AC011631 Homo sapiens, clone RP11-1I20, complete sequence Length = 158236 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 94 ccaattattgcactgaacaataaa 117 ||||||||||||||||| |||||| Sbjct: 138517 ccaattattgcactgaaaaataaa 138540
>emb|AL954370.3| Mouse DNA sequence from clone RP23-180P4 on chromosome 2, complete sequence Length = 61741 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 agatgccacacccacacttg 176 |||||||||||||||||||| Sbjct: 16795 agatgccacacccacacttg 16776
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 agccacggttcaccttcagg 426 |||||||||||||||||||| Sbjct: 24111101 agccacggttcaccttcagg 24111082
>emb|BX831603.1|CNS0A10N Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH18ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1372 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 993 atgttccccatcttgatcat 974
>gb|BC035901.1| Homo sapiens WD repeat domain 21A, transcript variant 2, mRNA (cDNA clone MGC:46524 IMAGE:5241663), complete cds Length = 2360 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ttcaccttcaggttggtgaagtag 438 ||||||||| |||||||||||||| Sbjct: 657 ttcaccttccggttggtgaagtag 634
>gb|BC018979.2| Homo sapiens WD repeat domain 21A, transcript variant 1, mRNA (cDNA clone MGC:20547 IMAGE:3604168), complete cds Length = 2420 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ttcaccttcaggttggtgaagtag 438 ||||||||| |||||||||||||| Sbjct: 715 ttcaccttccggttggtgaagtag 692
>gb|AY088509.1| Arabidopsis thaliana clone 7360 mRNA, complete sequence Length = 1351 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 1004 atgttccccatcttgatcat 985
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 agccacggttcaccttcagg 426 |||||||||||||||||||| Sbjct: 44516 agccacggttcaccttcagg 44497
>emb|BX005219.12| Mouse DNA sequence from clone RP23-343B19 on chromosome X, complete sequence Length = 83957 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aacattgaaatgacttttta 27 |||||||||||||||||||| Sbjct: 35157 aacattgaaatgacttttta 35138
>dbj|AP002032.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPH15 Length = 71277 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 30590 atgttccccatcttgatcat 30609
>dbj|AK118827.1| Arabidopsis thaliana At5g06730 mRNA for putative peroxidase, complete cds, clone: RAFL21-16-B10 Length = 1296 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 1010 atgttccccatcttgatcat 991
>dbj|AK063147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-H03, full insert sequence Length = 770 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 agccacggttcaccttcagg 426 |||||||||||||||||||| Sbjct: 456 agccacggttcaccttcagg 437
>tpe|BN000653.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx124 gene for class III peroxidase 124 precursor, exons 1-2 Length = 6789 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcat 290 |||||||||||||||||||| Sbjct: 6722 atgttccccatcttgatcat 6703
>emb|BX247962.1|CNSLT1I5S human full-length cDNA clone CS0DA010YD24 of Neuroblastoma of Homo sapiens (human) Length = 1587 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 ttcaccttcaggttggtgaagtag 438 ||||||||| |||||||||||||| Sbjct: 730 ttcaccttccggttggtgaagtag 707
>dbj|AP004954.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT21G09, TM0131, complete sequence Length = 93645 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 271 atgttccccatcttgatcatggaatttgcgaa 302 |||||||||||| |||||||||| || ||||| Sbjct: 47755 atgttccccatcatgatcatggacttggcgaa 47724 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,765,311 Number of Sequences: 3902068 Number of extensions: 3765311 Number of successful extensions: 78250 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77767 Number of HSP's gapped (non-prelim): 483 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)