ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet112a03 |
|---|---|
| Clone Library Name | barley_pub |
>HTH_ARATH (Q9S746) Protein HOTHEAD precursor (Protein ADHESION OF CALYX| EDGES) Length = 594 Score = 140 bits (352), Expect = 2e-33 Identities = 65/88 (73%), Positives = 71/88 (80%) Frame = -1 Query: 437 PKHTNTTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPGT 258 PK N T+S+ QFCKDTV+TIWHYHGGC VGKVV +VLG LRV+DGSTF SPGT Sbjct: 507 PKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGT 566 Query: 257 NPQATVMMMGRYFGVKILRERLGPAAGV 174 NPQAT+MMMGRY GVKILRERLG AGV Sbjct: 567 NPQATMMMMGRYMGVKILRERLGNKAGV 594
>MDL1_PRUSE (P52706) (R)-mandelonitrile lyase 1 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 1) ((R)-oxynitrilase 1) Length = 563 Score = 98.6 bits (244), Expect = 6e-21 Identities = 43/82 (52%), Positives = 57/82 (69%) Frame = -1 Query: 440 IPKHTNTTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPG 261 +PK + E FC+++V + WHYHGGC VGKV+D RV G LRVVDGSTF +P Sbjct: 463 LPKDQTDDAAFETFCRESVASYWHYHGGCLVGKVLDGDFRVTGIDALRVVDGSTFPYTPA 522 Query: 260 TNPQATVMMMGRYFGVKILRER 195 ++PQ +M+GRY G+KIL+ER Sbjct: 523 SHPQGFYLMLGRYVGIKILQER 544
>MDL2_PRUSE (O50048) (R)-mandelonitrile lyase 2 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 2) ((R)-oxynitrilase 2) Length = 576 Score = 98.2 bits (243), Expect = 8e-21 Identities = 42/83 (50%), Positives = 58/83 (69%) Frame = -1 Query: 440 IPKHTNTTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPG 261 +P++ + E FC++ V + WHYHGGC VG+V+D RV G + LRVVDGSTF +P Sbjct: 465 LPENQTDDAAFETFCREAVASYWHYHGGCLVGEVLDDDFRVTGINALRVVDGSTFPSTPA 524 Query: 260 TNPQATVMMMGRYFGVKILRERL 192 ++PQ +M+GRY G KIL+ERL Sbjct: 525 SHPQGFYLMLGRYMGTKILQERL 547
>MDL4_PRUSE (O82784) (R)-mandelonitrile lyase 4 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 4) ((R)-oxynitrilase 4) Length = 574 Score = 97.4 bits (241), Expect = 1e-20 Identities = 42/82 (51%), Positives = 58/82 (70%) Frame = -1 Query: 440 IPKHTNTTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPG 261 +P++ + E+FC+DTV + WHYHGG VGKV+D RV G + LRVVDGSTF +P Sbjct: 465 LPENQTDDAAFEKFCRDTVASYWHYHGGAIVGKVIDGNFRVTGINALRVVDGSTFPATPA 524 Query: 260 TNPQATVMMMGRYFGVKILRER 195 ++PQ +M+GRY G KI++ER Sbjct: 525 SHPQGFYLMLGRYVGTKIVQER 546
>MDL3_PRUSE (P52707) (R)-mandelonitrile lyase 3 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 3) ((R)-oxynitrilase 3) Length = 573 Score = 97.4 bits (241), Expect = 1e-20 Identities = 41/82 (50%), Positives = 59/82 (71%) Frame = -1 Query: 440 IPKHTNTTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPG 261 +P++ + E FC+++V + WHYHGGC VGKV+D RV G + LRVVDGSTF +P Sbjct: 464 LPENQTDDAAFETFCRESVASYWHYHGGCLVGKVLDDGFRVTGINALRVVDGSTFPSTPA 523 Query: 260 TNPQATVMMMGRYFGVKILRER 195 ++PQ +M+GRY G++IL+ER Sbjct: 524 SHPQGFYLMLGRYMGIQILQER 545
>MDL1_PRUDU (O24243) (R)-mandelonitrile lyase 1 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 1) ((R)-oxynitrilase 1) Length = 559 Score = 91.7 bits (226), Expect = 7e-19 Identities = 41/82 (50%), Positives = 54/82 (65%) Frame = -1 Query: 440 IPKHTNTTESLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPG 261 +P++ S E FC D V + WHYHGG VGKV+D RV+G LRVVD STF P Sbjct: 464 LPENQTDDASFETFCLDNVASYWHYHGGSLVGKVLDDSFRVMGIKALRVVDASTFPYEPN 523 Query: 260 TNPQATVMMMGRYFGVKILRER 195 ++PQ +M+GRY G++IL+ER Sbjct: 524 SHPQGFYLMLGRYVGLQILQER 545
>BETA_RHILO (Q985M5) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 550 Score = 46.6 bits (109), Expect = 3e-05 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 7/90 (7%) Frame = -1 Query: 431 HTNTTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGASGLRVVDGSTFSR 270 H + + L+ F +D + +H G C +G+ VVD + RV+G GLRV D S F R Sbjct: 446 HVQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRVADSSIFPR 505 Query: 269 SPGTNPQATVMMMGRYFGVKIL-RERLGPA 183 N A +M G IL R L P+ Sbjct: 506 VTNGNLNAPSIMTGEKASDHILGRTPLAPS 535
>BETA_CHRSL (Q9L4K0) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 558 Score = 46.2 bits (108), Expect = 4e-05 Identities = 31/85 (36%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Frame = -1 Query: 416 ESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQ 249 E L+ F K T +H G C +G+ V D Q RV G GLRVVD S F P N Sbjct: 460 EELDNFVKQHAETAYHPCGSCRMGEGDMAVTDAQGRVHGLEGLRVVDASLFPVIPTGNLN 519 Query: 248 ATVMMMGRYFGVKILRERLGPAAGV 174 A +M+ +I P A V Sbjct: 520 APTIMLAEKIADRIRGREPLPRASV 544
>BETA_BRUSU (Q8G1Z8) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = -1 Query: 431 HTNTTESLEQFCKDTVITIWHYHGGCHVGKV------VDQQHRVLGASGLRVVDGSTFSR 270 H T + ++ F ++ V + +H G C +G V VD + RV+G GLRV D S F R Sbjct: 445 HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPR 504 Query: 269 SPGTNPQATVMMMG 228 N +M+G Sbjct: 505 ITNGNLNGPSIMVG 518
>BETA_BRUME (Q8YFY2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 45.1 bits (105), Expect = 8e-05 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 6/74 (8%) Frame = -1 Query: 431 HTNTTESLEQFCKDTVITIWHYHGGCHVGKV------VDQQHRVLGASGLRVVDGSTFSR 270 H T + ++ F ++ V + +H G C +G V VD + RV+G GLRV D S F R Sbjct: 445 HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGLRVADSSIFPR 504 Query: 269 SPGTNPQATVMMMG 228 N +M+G Sbjct: 505 ITNGNLNGPSIMVG 518
>BETA_ECOLI (P17444) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVG----KVVDQQHRVLGASGLRVVDGSTFSRSPGTN 255 T E L++F ++ T +H G C +G VVD + RV G GLRVVD S + N Sbjct: 456 TDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGN 515 Query: 254 PQATVMMMG 228 AT +M+G Sbjct: 516 LNATTIMIG 524
>BETA_ECO57 (Q8X6C6) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 562 Score = 43.9 bits (102), Expect = 2e-04 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVG----KVVDQQHRVLGASGLRVVDGSTFSRSPGTN 255 T E L++F ++ T +H G C +G VVD + RV G GLRVVD S + N Sbjct: 456 TDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGN 515 Query: 254 PQATVMMMG 228 AT +M+G Sbjct: 516 LNATTIMIG 524
>BETA_ECOL6 (Q8FKI9) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 43.5 bits (101), Expect = 2e-04 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 4/69 (5%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVG----KVVDQQHRVLGASGLRVVDGSTFSRSPGTN 255 T E L++F ++ T +H G C +G VVD + RV G GLRVVD S + N Sbjct: 456 TDEQLDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVHGLEGLRVVDASIMPQIITGN 515 Query: 254 PQATVMMMG 228 AT +M+G Sbjct: 516 LNATTIMIG 524
>NINAG_DROME (Q9VGP2) Neither inactivation nor afterpotential protein G| precursor (EC 1.-.-.-) Length = 581 Score = 41.6 bits (96), Expect = 9e-04 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -1 Query: 371 HYHGG-CHVGKVVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVKILRER 195 H+ GG C +G VVD Q R+ G S +RVVD S R NP + V+ + IL+ Sbjct: 515 HHPGGTCALGSVVDSQLRLKGVSNVRVVDASVLPRPISGNPNSVVVAIALRAASWILKSE 574 Query: 194 L 192 L Sbjct: 575 L 575
>CHOD_STRS0 (P12676) Cholesterol oxidase precursor (EC 1.1.3.6) (CHOD)| Length = 546 Score = 41.2 bits (95), Expect = 0.001 Identities = 21/59 (35%), Positives = 29/59 (49%) Frame = -1 Query: 374 WHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVKILRE 198 +H GGC +GK D RV G L V DGS S G NP T+ + +I+++ Sbjct: 483 YHPLGGCVLGKATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVERIIKQ 541
>BETA_PSEPK (Q88CW6) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 565 Score = 39.7 bits (91), Expect = 0.003 Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTN 255 T E L++F ++ T +H C +G VVD + RV G GLRVVD S N Sbjct: 458 TDEQLDKFIREHAETAFHPSCSCKMGTDDMAVVDGEGRVHGMKGLRVVDASIMPLIITGN 517 Query: 254 PQATVMMMGRYFGVKI 207 AT +M+ KI Sbjct: 518 LNATTIMIAEKISDKI 533
>BETA_RHIME (P54223) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 39.7 bits (91), Expect = 0.003 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGASGLRVVDGSTFSRSPG 261 T E ++ F ++ + + +H G C +G VVD + RV+G GLRV D S F Sbjct: 448 TDEEIDGFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRVADSSIFPHITY 507 Query: 260 TNPQATVMMMG 228 N A +M G Sbjct: 508 GNLNAPSIMTG 518
>YTH2_RHOER (P46371) Hypothetical GMC-type oxidoreductase in thcA 5'region| (ORF2) Length = 493 Score = 39.3 bits (90), Expect = 0.004 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 6/68 (8%) Frame = -1 Query: 416 ESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGASGLRVVDGSTFSRSPGTN 255 E +++ + + T H G C +G VVD + RV+GA GL +VD S P Sbjct: 414 EYTDEWVESRLGTSLHMSGSCVMGAESDPFAVVDDRCRVIGAQGLSIVDTSILPTIPTRG 473 Query: 254 PQATVMMM 231 P AT +M+ Sbjct: 474 PHATAVMV 481
>BETA_AGRT5 (Q8UH55) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 38.9 bits (89), Expect = 0.006 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%) Frame = -1 Query: 434 KHTNTTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGASGLRVVDGSTFS 273 ++ T E ++ F ++ + + +H G C +G VVD + RV+G GLRV D S F Sbjct: 444 ENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFP 503 Query: 272 RSPGTNPQATVMMMG 228 N +M G Sbjct: 504 HVTYGNLNGPSIMTG 518
>BETA_PSEAE (Q9HTJ2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 561 Score = 38.1 bits (87), Expect = 0.010 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Frame = -1 Query: 410 LEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQAT 243 L++F ++ T +H C +G VVD Q RV G GLRVVD S N AT Sbjct: 462 LDEFIRNHAETAFHPSCSCKMGSDDMAVVDGQGRVHGMEGLRVVDASIMPLIITGNLNAT 521 Query: 242 VMMMGRYFGVKI 207 +MM +I Sbjct: 522 TIMMAEKIADRI 533
>BETA_YERPE (Q8ZGW0) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 567 Score = 38.1 bits (87), Expect = 0.010 Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Frame = -1 Query: 416 ESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQ 249 + L+ F ++ T +H C +G VVD Q RV G GLRVVD S + N Sbjct: 458 DELDAFIREHAETAYHPSCSCKMGDDKMAVVDGQGRVHGVQGLRVVDASIMPQIITGNLN 517 Query: 248 ATVMMMGRYFGVKI 207 AT +M+ +I Sbjct: 518 ATTIMIAEKIADRI 531
>Y4NJ_RHISN (P55582) Hypothetical GMC-type oxidoreductase y4nJ| Length = 505 Score = 38.1 bits (87), Expect = 0.010 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 5/60 (8%) Frame = -1 Query: 395 KDTVITIWHYHGGCHVGK-----VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMM 231 K T + H C G+ VD RV G L V DGS +PG NPQ T+M + Sbjct: 423 KATNLMTIHLFSTCPPGEHRDACAVDSYGRVRGVENLFVADGSVIPEAPGVNPQMTIMAL 482
>BETA_XANAC (Q8PPG8) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 38.1 bits (87), Expect = 0.010 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTN 255 T L+ F + T +H C +G VVD Q RV G GLRV+D S R N Sbjct: 458 TDAELDAFVRSRAETAYHPSCSCAMGTDAMAVVDGQGRVHGMEGLRVIDASIMPRIITGN 517 Query: 254 PQATVMMM 231 AT +M+ Sbjct: 518 LNATTIMI 525
>PNO_MICLT (Q9AJD6) Pyridoxine 4-oxidase (EC 1.1.3.12)| Length = 506 Score = 37.7 bits (86), Expect = 0.013 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Frame = -1 Query: 440 IPKHTNTTESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGS 282 +PK ++ ++ F VIT H G C +GK VVD R+ G L VVDGS Sbjct: 424 LPKSLAASQDIDTFIAKAVITHHHPSGTCRMGKDEMSVVDADLRLRGLDNLYVVDGS 480
>BETA_PSESM (Q88AE7) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 568 Score = 37.4 bits (85), Expect = 0.017 Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -1 Query: 416 ESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQ 249 E+L+QF ++ T +H C +G VVD Q RV G LRVVD S N Sbjct: 462 EALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGMQNLRVVDASIMPIITTGNLN 521 Query: 248 ATVMMMGRYFGVKI 207 A +M+ KI Sbjct: 522 APTIMIAEKIADKI 535
>BETA_XANCP (Q8P5D7) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 37.4 bits (85), Expect = 0.017 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTN 255 T L+ F + T +H C +G VVD Q RV G GLRV+D S R N Sbjct: 458 TDAELDAFVRARAETAYHPSCSCAMGTDDMAVVDGQGRVHGMEGLRVIDASIMPRIITGN 517 Query: 254 PQATVMMM 231 AT +M+ Sbjct: 518 LNATTIMI 525
>Y1310_MYCBO (P64264) Hypothetical GMC-type oxidoreductase Mb1310| Length = 528 Score = 35.0 bits (79), Expect = 0.083 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 8/79 (10%) Frame = -1 Query: 440 IPKHTNTTE----SLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDG 285 I + N+TE +LE T++H G C +G VVD Q RV G GLRV D Sbjct: 441 IARPRNSTELDEATLELALATCSHTLYHPMGTCRMGSDEASVVDPQLRVRGVDGLRVADA 500 Query: 284 STFSRSPGTNPQATVMMMG 228 S + + A +++G Sbjct: 501 SVMPSTVRGHTHAPSVLIG 519
>Y1279_MYCTU (P64263) Hypothetical GMC-type oxidoreductase Rv1279/MT1316| Length = 528 Score = 35.0 bits (79), Expect = 0.083 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 8/79 (10%) Frame = -1 Query: 440 IPKHTNTTE----SLEQFCKDTVITIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDG 285 I + N+TE +LE T++H G C +G VVD Q RV G GLRV D Sbjct: 441 IARPRNSTELDEATLELALATCSHTLYHPMGTCRMGSDEASVVDPQLRVRGVDGLRVADA 500 Query: 284 STFSRSPGTNPQATVMMMG 228 S + + A +++G Sbjct: 501 SVMPSTVRGHTHAPSVLIG 519
>CHDH_HUMAN (Q8NE62) Choline dehydrogenase, mitochondrial precursor (EC| 1.1.99.1) (CHD) (CDH) Length = 594 Score = 35.0 bits (79), Expect = 0.083 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Frame = -1 Query: 431 HTNTTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGASGLRVVDGSTFSR 270 H + + ++ F + + +H C +G+ VVD Q RVLG LRVVD S Sbjct: 491 HIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPS 550 Query: 269 SPGTNPQATVMMM 231 N A +M+ Sbjct: 551 MVSGNLNAPTIMI 563
>CDH_PHACH (Q01738) Cellobiose dehydrogenase precursor (EC 1.1.99.18) (CDH)| (Cellobiose-quinone oxidoreductase) Length = 773 Score = 34.7 bits (78), Expect = 0.11 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = -1 Query: 341 VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVKILRERLGP 186 VVD +V G + L +VD P NPQ T+M KIL GP Sbjct: 722 VVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 773
>CHDH_MOUSE (Q8BJ64) Choline dehydrogenase, mitochondrial precursor (EC| 1.1.99.1) (CHD) (CDH) Length = 596 Score = 33.5 bits (75), Expect = 0.24 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Frame = -1 Query: 431 HTNTTESLEQFCKDTVITIWHYHGGCHVGK------VVDQQHRVLGASGLRVVDGSTFSR 270 H + + ++ F + + +H C +G+ VVD Q +V+G LRVVD S Sbjct: 493 HVQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIMPS 552 Query: 269 SPGTNPQATVMMM 231 N A +M+ Sbjct: 553 VVSGNLNAPTVMI 565
>ALOX_PICAN (P04841) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methanol oxidase)| (MOX) Length = 664 Score = 32.7 bits (73), Expect = 0.41 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 11/74 (14%) Frame = -1 Query: 416 ESLEQFCKDTVITIWHYHGGCHV-----------GKVVDQQHRVLGASGLRVVDGSTFSR 270 E++ + K+ T WH G C + G V+D + V G L+V D S Sbjct: 553 EAIVNYIKEHTETTWHCLGTCSMAPREGSKIAPKGGVLDARLNVYGVQNLKVADLSVCPD 612 Query: 269 SPGTNPQATVMMMG 228 + G N +T + +G Sbjct: 613 NVGCNTYSTALTIG 626
>ALKJ_PSEOL (Q00593) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)| Length = 558 Score = 32.7 bits (73), Expect = 0.41 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = -1 Query: 380 TIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGV 213 TI+H G C +GK VVD ++ G + +RVVD S N A +M+ Sbjct: 466 TIYHPVGTCRMGKDPASVVDPCLKIRGLANIRVVDASIMPHLVAGNTNAPTIMIAENAAE 525 Query: 212 KILR 201 I+R Sbjct: 526 IIMR 529
>GOX_TALFL (Q92452) Glucose oxidase precursor (EC 1.1.3.4) (Glucose| oxyhydrase) (GOD) (Beta-D-glucose:oxygen 1-oxido-reductase) Length = 605 Score = 32.3 bits (72), Expect = 0.54 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = -1 Query: 374 WHYHGGC-----HVGKVVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVK 210 WH C +G VVD +V G GLRV+DGS P T + VM + ++G+ Sbjct: 537 WHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSI----PPTQVSSHVMTI--FYGMA 590 Query: 209 I 207 + Sbjct: 591 L 591
>GOX_ASPNG (P13006) Glucose oxidase precursor (EC 1.1.3.4) (Glucose| oxyhydrase) (GOD) (Beta-D-glucose:oxygen 1-oxido-reductase) Length = 605 Score = 32.3 bits (72), Expect = 0.54 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%) Frame = -1 Query: 374 WHYHGGC-----HVGKVVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVK 210 +H G C +G VVD RV G GLRV+DGS P T + VM + +K Sbjct: 537 YHGVGTCSMMPKEMGGVVDNAARVYGVQGLRVIDGSI----PPTQMSSHVMTVFYAMALK 592 Query: 209 I 207 I Sbjct: 593 I 593
>GOX_PENAG (P81156) Glucose oxidase (EC 1.1.3.4) (Glucose oxyhydrase) (GOD)| (Beta-D-glucose:oxygen 1-oxido-reductase) Length = 587 Score = 32.3 bits (72), Expect = 0.54 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%) Frame = -1 Query: 374 WHYHGGC-----HVGKVVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGVK 210 WH C +G VVD +V G GLRV+DGS P T + VM + ++G+ Sbjct: 519 WHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSI----PPTQVSSHVMTI--FYGMA 572 Query: 209 I 207 + Sbjct: 573 L 573
>ALKJ_PSEPU (Q9WWW2) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)| Length = 552 Score = 32.0 bits (71), Expect = 0.70 Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = -1 Query: 380 TIWHYHGGCHVGK----VVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATVMMMGRYFGV 213 TI+H G C +GK VVD +V G +RVVD S N A +M+ Sbjct: 466 TIYHPVGTCRMGKDPASVVDPCLQVRGLRNIRVVDASIMPNLVAGNTNAPTIMIAENAAE 525 Query: 212 KILRE 198 I+R+ Sbjct: 526 IIVRK 530
>CHOD_BREST (P22637) Cholesterol oxidase precursor (EC 1.1.3.6) (CHOD)| Length = 552 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -1 Query: 374 WHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPGTNPQATV 240 +H GG + K D R+ GL VVDGS + G NP T+ Sbjct: 491 YHPLGGVLLNKATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTI 535
>BETA_STAXY (Q9X2M2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 560 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVGKVVDQQH-------RVLGASGLRVVDGSTFSRSP 264 T E + ++ K T H C +G D+ +V G LRVVD S R+ Sbjct: 455 TDEEIIEWVKRDGETALHPSCSCRMGPASDEMSVVDPETFKVHGMENLRVVDASVMPRTT 514 Query: 263 GTNPQATVMMM 231 N + V+MM Sbjct: 515 NGNIHSPVLMM 525
>BETA_STAS1 (Q4A0Q1) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 560 Score = 30.4 bits (67), Expect = 2.0 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%) Frame = -1 Query: 422 TTESLEQFCKDTVITIWHYHGGCHVGKVVDQQH-------RVLGASGLRVVDGSTFSRSP 264 T E + ++ K T H C +G D+ +V G LRVVD S R+ Sbjct: 455 TDEEIIEWVKRDGETALHPSCSCRMGPASDEMSVVDPETFKVHGMENLRVVDASVMPRTT 514 Query: 263 GTNPQATVMMM 231 N + V+MM Sbjct: 515 NGNIHSPVLMM 525
>AROQ_BARHE (Q6G523) 3-dehydroquinate dehydratase (EC 4.2.1.10)| (3-dehydroquinase) (Type II DHQase) Length = 148 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -1 Query: 428 TNTTESLEQFCKDTVITIW---HYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFSRSPGT 258 T T + +EQFCK+ + H++ + G++V+ +G S +++ + +S + Sbjct: 26 TETLKDIEQFCKECATRLGVRIHFYQSNYEGQLVEWIQEAIGVSAGLIINPAAYSHTSVA 85 Query: 257 NPQATVMMMG 228 A M G Sbjct: 86 ILDALKMFTG 95
>RPB2_YEAST (P08518) DNA-directed RNA polymerase II 140 kDa polypeptide (EC| 2.7.7.6) (B150) (RNA polymerase II subunit 2) Length = 1224 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 278 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 412 TLSH +R + G +P LH+TH W L CP + G Sbjct: 491 TLSHLRRTNTPIGRDGKLAKPRQLHNTH-----WGLVCPAETPEG 530
>RPB2_CANGA (Q6FLD5) DNA-directed RNA polymerase II polypeptide 2 (EC 2.7.7.6)| (RNA polymerase II subunit 2) Length = 1223 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 278 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 412 TLSH +R + G +P LH+TH W L CP + G Sbjct: 489 TLSHLRRTNTPIGRDGKLAKPRQLHNTH-----WGLVCPAETPEG 528
>RPB2_ASHGO (Q753Q4) DNA-directed RNA polymerase II polypeptide 2 (EC 2.7.7.6)| (RNA polymerase II subunit 2) Length = 1222 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +2 Query: 278 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 412 TLSH +R + G +P LH+TH W L CP + G Sbjct: 486 TLSHLRRTNTPIGRDGKLAKPRQLHNTH-----WGLVCPAETPEG 525
>DPO3A_BACSU (O34623) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1115 Score = 28.9 bits (63), Expect = 5.9 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 6/81 (7%) Frame = +1 Query: 58 MKLLDCLTLVIHTGSQQKLVISFLGHTH------IIKGRCSGIYYTPAAGPSRSLKIFTP 219 + L++ +T +I K+ +S + ++ + KG +GI+ +AG LK P Sbjct: 542 LTLIESITSMIEKEENIKIDLSSISYSDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLKP 601 Query: 220 KYLPIIMTVA*GLVPGDLENV 282 L I+ V PG +EN+ Sbjct: 602 SGLEDIVAVNALYRPGPMENI 622
>RPB2_SCHPO (Q02061) DNA-directed RNA polymerase II 138 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase II subunit 2) Length = 1210 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +2 Query: 278 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 412 TLSH +R + G +P LH+TH W + CP + G Sbjct: 477 TLSHLRRTNTPIGRDGKLAKPRQLHNTH-----WGMVCPAETPEG 516
>MRP14_ARATH (Q9LYS2) Multidrug resistance-associated protein 14 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 14) (ATP-energized glutathione S-conjugate pump 14) Length = 1389 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -1 Query: 413 SLEQFCKDTVITIWHYHGGCHVGKVVDQQHRVLGASGLRVVDGSTFS 273 +L+ C+ + IW G C + +VV ++ G L V DGS +S Sbjct: 1237 NLDPLCQHSDAEIWEVLGKCQLKEVVQEKEN--GLDSLVVEDGSNWS 1281
>RPB2_ENCCU (Q8SR75) DNA-directed RNA polymerase II polypeptide 2 (EC 2.7.7.6)| (RNA polymerase II subunit 2) Length = 1141 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +2 Query: 278 TLSHQQRGALRLQAPGAAGRPPSLHDTHHGSARW*LPCPCKIALG 412 TLSH +R ++ G P LH+TH W + CP + G Sbjct: 450 TLSHLRRVNTPIEKEGKLAAPRQLHNTH-----WGMVCPAETPEG 489 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,725,171 Number of Sequences: 219361 Number of extensions: 1634913 Number of successful extensions: 4244 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 4149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4243 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
