ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet10g07 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 44.3 bits (103), Expect = 1e-04 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGAKKFV NAA SFS+A Sbjct: 236 QAGDKRWFKGAKKFVENAATSFSIA 260
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 44.3 bits (103), Expect = 1e-04 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGAKKFV NAA SFS+A Sbjct: 234 QAGDKRWFKGAKKFVENAATSFSIA 258
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGA+KFV NAA SFSVA Sbjct: 241 QAGDKRWFKGARKFVENAATSFSVA 265
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGA+KFV NAA SFSVA Sbjct: 244 QAGDKRWFKGARKFVENAATSFSVA 268
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/22 (90%), Positives = 21/22 (95%) Frame = -2 Query: 68 NKRWFKGAKKFV*NAAGSFSVA 3 +KRWFKGAKKFV NAAGSFSVA Sbjct: 237 DKRWFKGAKKFVENAAGSFSVA 258
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 42.0 bits (97), Expect = 5e-04 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGAKKFV +AA SFS A Sbjct: 241 QAGDKRWFKGAKKFVESAASSFSAA 265
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 42.0 bits (97), Expect = 5e-04 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGAKKFV N A SFS+A Sbjct: 242 QAGDKRWFKGAKKFVENTATSFSLA 266
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 42.0 bits (97), Expect = 5e-04 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGAKKFV N A SFS+A Sbjct: 241 QAGDKRWFKGAKKFVENTATSFSLA 265
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 42.0 bits (97), Expect = 5e-04 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGAKKFV +A SFSVA Sbjct: 243 QAGDKRWFKGAKKFVESATSSFSVA 267
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 42.0 bits (97), Expect = 5e-04 Identities = 19/25 (76%), Positives = 21/25 (84%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGA+KFV AA SFSVA Sbjct: 239 QAGDKRWFKGARKFVEGAASSFSVA 263
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 41.6 bits (96), Expect = 6e-04 Identities = 19/25 (76%), Positives = 22/25 (88%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGA+KFV +AA SFSVA Sbjct: 239 QAGDKRWFKGARKFVESAATSFSVA 263
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 40.8 bits (94), Expect = 0.001 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGA+KFV + A SFSVA Sbjct: 235 QAGDKRWFKGARKFVEDTASSFSVA 259
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGA KFV AA SFSVA Sbjct: 193 QAGDKRWFKGANKFVEKAATSFSVA 217
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGA KFV AA SFSVA Sbjct: 236 QAGDKRWFKGANKFVEKAATSFSVA 260
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 38.5 bits (88), Expect = 0.005 Identities = 17/25 (68%), Positives = 20/25 (80%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSVA 3 Q G+KRWFKGAKKFV + SF+VA Sbjct: 240 QAGDKRWFKGAKKFVESTTTSFNVA 264
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 32.3 bits (72), Expect = 0.39 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = -2 Query: 77 QTGNKRWFKGAKKFV*NAAGSFSV 6 Q G+KRWFKGAKK A SF+V Sbjct: 221 QIGDKRWFKGAKKEAMGAFDSFTV 244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,988,339 Number of Sequences: 219361 Number of extensions: 73136 Number of successful extensions: 227 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 227 length of database: 80,573,946 effective HSP length: 1 effective length of database: 80,354,585 effective search space used: 1928510040 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
