>emb|X57407.1|TAPPSBP Wheat PsbP mRNA for 23 kDa oxygen evolving protein of photosystem
           II
          Length = 967

 Score = 77.8 bits (39), Expect = 4e-12
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatgcaacactgaaggatcctgcggcgttctaaacaaactttttggcgcccttgaaccac 60
           ||||| || ||||||||||||||||||||||  || ||||| ||||||||||||||||||
Sbjct: 794 tatgcgacgctgaaggatcctgcggcgttctcgacgaacttcttggcgcccttgaaccac 735

                  
Query: 61  cttttgt 67
           || ||||
Sbjct: 734 ctcttgt 728

>gb|AF022732.1|AF022732 Oryza sativa 23kDa polypeptide of photosystem II mRNA, complete cds
          Length = 1031

 Score = 44.1 bits (22), Expect = 0.052
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 34  acaaactttttggcgcccttgaaccaccttttgt 67
           ||||||||  ||||||||||||||||||| ||||
Sbjct: 798 acaaacttcctggcgcccttgaaccacctcttgt 765

>ref|NM_186247.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1114

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  tggcgcccttgaaccaccttttgt 67
           ||||||||||||||||||| ||||
Sbjct: 830 tggcgcccttgaaccacctcttgt 807

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 44      tggcgcccttgaaccaccttttgt 67
               ||||||||||||||||||| ||||
Sbjct: 2169315 tggcgcccttgaaccacctcttgt 2169338

>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 44    tggcgcccttgaaccaccttttgt 67
             ||||||||||||||||||| ||||
Sbjct: 37217 tggcgcccttgaaccacctcttgt 37240

>dbj|AK104722.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-B02, full
           insert sequence
          Length = 1078

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  tggcgcccttgaaccaccttttgt 67
           ||||||||||||||||||| ||||
Sbjct: 786 tggcgcccttgaaccacctcttgt 763

>dbj|AK065248.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002J02, full
           insert sequence
          Length = 1114

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  tggcgcccttgaaccaccttttgt 67
           ||||||||||||||||||| ||||
Sbjct: 830 tggcgcccttgaaccacctcttgt 807

>gb|AY103732.1| Zea mays PCO073407 mRNA sequence
          Length = 1083

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  tggcgcccttgaaccaccttttgt 67
           ||||||||||||||||||| ||||
Sbjct: 808 tggcgcccttgaaccacctcttgt 785

>gb|AF052203.1|AF052203 Oryza sativa 23 kDa polypeptide of photosystem II mRNA, complete
           cds
          Length = 1107

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  tggcgcccttgaaccaccttttgt 67
           ||||||||||||||||||| ||||
Sbjct: 805 tggcgcccttgaaccacctcttgt 782

>dbj|D49713.1|RICOSEE2 Rice OSOEE2 gene for 23 kDa polypeptide of photosystem II, complete
           cds
          Length = 1008

 Score = 40.1 bits (20), Expect = 0.81
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 44  tggcgcccttgaaccaccttttgt 67
           ||||||||||||||||||| ||||
Sbjct: 744 tggcgcccttgaaccacctcttgt 721

>emb|CR769781.9| Zebrafish DNA sequence from clone DKEY-215B13 in linkage group 1,
              complete sequence
          Length = 180227

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     gttctaaacaaactttttg 45
              |||||||||||||||||||
Sbjct: 155234 gttctaaacaaactttttg 155216

>emb|CR762426.15| Zebrafish DNA sequence from clone DKEY-54K9 in linkage group 1,
             complete sequence
          Length = 164460

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    gttctaaacaaactttttg 45
             |||||||||||||||||||
Sbjct: 95221 gttctaaacaaactttttg 95203

>emb|CR388402.15| Zebrafish DNA sequence from clone DKEY-97I21 in linkage group 1,
             complete sequence
          Length = 155300

 Score = 38.2 bits (19), Expect = 3.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 27    gttctaaacaaactttttg 45
             |||||||||||||||||||
Sbjct: 38922 gttctaaacaaactttttg 38904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 587,336
Number of Sequences: 3902068
Number of extensions: 587336
Number of successful extensions: 37323
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37295
Number of HSP's gapped (non-prelim): 28
length of query: 78
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 57
effective length of database: 17,151,101,840
effective search space: 977612804880
effective search space used: 977612804880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)