ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet10g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ALG10_CANAL (Q59YV2) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4... 30 2.2
2CND1_YEAST (Q06156) Condensin complex subunit 1 (XCAP-D2 homolog) 28 8.5

>ALG10_CANAL (Q59YV2) Alpha-1,2 glucosyltransferase ALG10 (EC 2.4.1.-)|
           (Alpha-2-glucosyltransferase ALG10)
           (Dolichyl-phosphoglucose-dependent glucosyltransferase
           ALG10) (Asparagine-linked glycosylation protein 10)
          Length = 450

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 125 DSHRWSFHFVLLLYCVTNQAWSWFP*WLHGNNIKIFF 15
           D+H+   H V + YC T   +   P WL+ + IK ++
Sbjct: 269 DNHQIELHIVQVFYCFTFITFFTIPNWLNKSTIKKYY 305



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>CND1_YEAST (Q06156) Condensin complex subunit 1 (XCAP-D2 homolog)|
          Length = 1176

 Score = 27.7 bits (60), Expect = 8.5
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 204 RCNEQPPQVRTDACSGCN-ICSLKSRVGFTPVVFPFRATLVLCNKSSV 64
           R  +  P VRT A  GC+ IC L S+   +   F   A   L ++SS+
Sbjct: 366 RFQDSNPYVRTKAIQGCSKICDLSSKFNKSKAKFTSLAVRSLQDRSSL 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,033,573
Number of Sequences: 219361
Number of extensions: 428868
Number of successful extensions: 1269
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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