| Clone Name | rbaet10e07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ref|XM_752485.1| Ustilago maydis 521 hypothetical protein (UM014... | 36 | 3.3 | 2 | emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... | 36 | 3.3 | 3 | gb|BC084980.1| Xenopus laevis hypothetical LOC495453, mRNA (cDNA... | 36 | 3.3 |
|---|
>ref|XM_752485.1| Ustilago maydis 521 hypothetical protein (UM01431.1) partial mRNA Length = 4194 Score = 36.2 bits (18), Expect = 3.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 gagcgactgggtgatgcc 28 |||||||||||||||||| Sbjct: 2664 gagcgactgggtgatgcc 2647
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 36.2 bits (18), Expect = 3.3 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 gagcgactgggtgatgcc 28 |||||||||||||||||| Sbjct: 1040375 gagcgactgggtgatgcc 1040358
>gb|BC084980.1| Xenopus laevis hypothetical LOC495453, mRNA (cDNA clone MGC:86465 IMAGE:4202444), complete cds Length = 1947 Score = 36.2 bits (18), Expect = 3.3 Identities = 18/18 (100%) Strand = Plus / Plus Query: 18 tgggtgatgccttggatg 35 |||||||||||||||||| Sbjct: 1701 tgggtgatgccttggatg 1718 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 152,035 Number of Sequences: 3902068 Number of extensions: 152035 Number of successful extensions: 36372 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36353 Number of HSP's gapped (non-prelim): 19 length of query: 35 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 15 effective length of database: 17,155,003,908 effective search space: 257325058620 effective search space used: 257325058620 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)