ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet10d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Can... 46 0.068
2gb|AC138342.11| Mus musculus chromosome 12, clone RP23-37C23, co... 44 0.27
3gb|AC130821.3| Mus musculus BAC clone RP23-205K12 from chromosom... 42 1.1
4gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, comple... 42 1.1
5emb|AL355602.11| Human DNA sequence from clone RP5-1166F10 on ch... 42 1.1
6emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chr... 42 1.1
7gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 40 4.2
8gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
9gb|AC087325.9| Trypanosoma brucei chromosome 4 clone RPCI93-29M1... 40 4.2
10gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, com... 40 4.2
11gb|AC099594.6| Mus musculus chromosome 15, clone RP23-458G7, com... 40 4.2
12gb|AC168853.1| Mus musculus BAC clone RP23-447G14 from chromosom... 40 4.2
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.2
14gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosom... 40 4.2
15gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, c... 40 4.2
16emb|CR381579.22| Zebrafish DNA sequence from clone CH211-229N1 i... 40 4.2
17emb|CR974470.7| L.saxatilis DNA sequence from clone CH317-148L22... 40 4.2
18gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, co... 40 4.2
19emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 i... 40 4.2
20gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome... 40 4.2
21gb|AC011352.6| Homo sapiens chromosome 5 clone CTC-327F10, compl... 40 4.2
22gb|AC155171.7| Mus musculus BAC clone RP23-100A10 from chromosom... 40 4.2
23emb|AL512424.14| Human DNA sequence from clone RP11-453E2 on chr... 40 4.2
24emb|AL356305.11| Human DNA sequence from clone RP11-109K20 on ch... 40 4.2
25emb|AL354816.5| Human DNA sequence from clone RP11-540M5 on chro... 40 4.2
26gb|AF462446.1| Homo sapiens unknown mRNA 40 4.2
27emb|AL096708.34|HS1179L24 Human DNA sequence from clone RP5-1179... 40 4.2
28emb|AL031119.1|HS28C20 Human DNA sequence from clone RP1-28C20 o... 40 4.2
29gb|AC164087.5| Mus musculus BAC clone RP23-408K7 from chromosome... 40 4.2
30emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, co... 40 4.2
31dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
32emb|AJ416407.1|PVU416407 Phaseolus vulgaris microsatellite DNA, ... 40 4.2
33gb|AC011424.4| Homo sapiens chromosome 5 clone P1_1242F12, compl... 40 4.2
34gb|AF407166.1| Homo sapiens PKC-potentiated PP1 inhibitory prote... 40 4.2
35gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, comp... 40 4.2
36gb|AC005552.3| Homo sapiens chromosome 17, clone RP11-212E8, com... 40 4.2
37gb|AC090720.5| Homo sapiens chromosome 11, clone RP11-768P16, co... 40 4.2
38gb|AC153570.9| Mus musculus 10 BAC RP23-221F6 (Roswell Park Canc... 40 4.2
39gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome ... 40 4.2
40gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, pa... 40 4.2
41emb|AL512362.4|CNS07EFB Human chromosome 14 DNA sequence BAC R-7... 40 4.2
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
43dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
44gb|AC012368.6| Homo sapiens BAC clone RP11-547M24 from 2, comple... 40 4.2
45gb|AC155943.9| Mus musculus 10 BAC RP24-461P19 (Roswell Park Can... 40 4.2
46gb|AC154434.2| Mus musculus BAC clone RP24-185H5 from chromosome... 40 4.2
47gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, co... 40 4.2
48emb|BX927359.1| Human chromosome 14 DNA sequence BAC R-614O9 of ... 40 4.2
49emb|BX000358.11| Zebrafish DNA sequence from clone DKEY-77A20 in... 40 4.2
50dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
51gb|AC009134.6|AC009134 Homo sapiens chromosome 16 clone RP11-505... 40 4.2
52emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in ... 40 4.2
53emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in... 40 4.2
54emb|AJ303349.1|CRU303349 Capsella rubella ORF1, ORF2, ORF3, ORF4... 40 4.2
55gb|U91325.1|HSU91325 Human chromosome 16p13.11 BAC clone CIT987S... 40 4.2
56emb|BX897748.11| Zebrafish DNA sequence from clone CH211-152M4 i... 40 4.2
57emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in... 40 4.2
58emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in... 40 4.2
59emb|CR847890.19| Zebrafish DNA sequence from clone DKEYP-70H9 in... 40 4.2
60emb|CT573039.4| Wallaby DNA sequence from clone MEKBa-403O8, com... 40 4.2
61gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome... 40 4.2
62emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, c... 40 4.2
63gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, compl... 40 4.2
64emb|AL732614.15| Mouse DNA sequence from clone RP23-322G17 on ch... 40 4.2
65emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chr... 40 4.2
66gb|AC002209.1|AC002209 Homo sapiens (subclone 2_e10 from P1 H31)... 40 4.2
67dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 4.2
68emb|AL928882.10| Mouse DNA sequence from clone RP23-281I20 on ch... 40 4.2
69emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chro... 40 4.2
70gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosom... 40 4.2 
>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159902

 Score = 46.1 bits (23), Expect = 0.068
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 199   cactcacatgcatgcacagacac 221
             |||||||||||||||||||||||
Sbjct: 66965 cactcacatgcatgcacagacac 66987
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>gb|AC138342.11| Mus musculus chromosome 12, clone RP23-37C23, complete sequence
          Length = 208939

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 188   tctctttctctcactcacatgcatgc 213
             |||||||||||| |||||||||||||
Sbjct: 37089 tctctttctctctctcacatgcatgc 37064
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>gb|AC130821.3| Mus musculus BAC clone RP23-205K12 from chromosome 13, complete
             sequence
          Length = 227411

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 187   ctctctttctctcactcacatgcatgcac 215
             |||||| |||||| |||||||||||||||
Sbjct: 27548 ctctctctctctctctcacatgcatgcac 27520
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>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence
          Length = 230940

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 187   ctctctttctctcactcacatgcatgcac 215
             |||||| |||||| |||||||||||||||
Sbjct: 58623 ctctctctctctctctcacatgcatgcac 58651
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>emb|AL355602.11| Human DNA sequence from clone RP5-1166F10 on chromosome 1 Contains the
             3' end of a novel gene (FLJ36179), complete sequence
          Length = 99163

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 198   tcactcacatgcatgcacagacact 222
             |||||||||| ||||||||||||||
Sbjct: 79173 tcactcacatacatgcacagacact 79197
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>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete
             sequence
          Length = 201673

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   tcacatgcatgcacagacact 222
             |||||||||||||||||||||
Sbjct: 42516 tcacatgcatgcacagacact 42536
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>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ctctctttctctcactcaca 206
              ||||||||||||||||||||
Sbjct: 482488 ctctctttctctcactcaca 482507
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>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08
              map S15179S, complete sequence
          Length = 166005

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 187    ctctctttctctcactcacatgcatgca 214
              |||| |||||||| ||||||||||||||
Sbjct: 133038 ctctttttctctctctcacatgcatgca 133011
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>gb|AC087325.9| Trypanosoma brucei chromosome 4 clone RPCI93-29M18, complete sequence
          Length = 123258

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   ctctctttctctcactcaca 206
             ||||||||||||||||||||
Sbjct: 34734 ctctctttctctcactcaca 34753
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>gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, complete sequence
          Length = 177277

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 203    cacatgcatgcacagacactgaac 226
              |||||||||||||| |||||||||
Sbjct: 133853 cacatgcatgcacacacactgaac 133830
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>gb|AC099594.6| Mus musculus chromosome 15, clone RP23-458G7, complete sequence
          Length = 220242

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 199   cactcacatgcatgcacagacact 222
             |||||||||||||||||| |||||
Sbjct: 80533 cactcacatgcatgcacacacact 80510
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>gb|AC168853.1| Mus musculus BAC clone RP23-447G14 from chromosome 12, complete
             sequence
          Length = 188352

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctctctttctctcactcacatgca 210
             ||||||||||||| ||||||||||
Sbjct: 33113 ctctctttctctctctcacatgca 33136
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 187      ctctctttctctcactcacatgcatgca 214
                |||| |||||||| ||||||||||||||
Sbjct: 35735260 ctctttttctctctctcacatgcatgca 35735233
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>gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosome 7, complete sequence
          Length = 192433

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ctcactcacatgcatgcaca 216
              ||||||||||||||||||||
Sbjct: 116770 ctcactcacatgcatgcaca 116751
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>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence
          Length = 245390

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 203   cacatgcatgcacagacactgaac 226
             |||||||||||||| |||||||||
Sbjct: 46326 cacatgcatgcacacacactgaac 46303
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>emb|CR381579.22| Zebrafish DNA sequence from clone CH211-229N1 in linkage group 15,
             complete sequence
          Length = 130841

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   ctctctttctctcactcaca 206
             ||||||||||||||||||||
Sbjct: 10800 ctctctttctctcactcaca 10819
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>emb|CR974470.7| L.saxatilis DNA sequence from clone CH317-148L22, complete sequence
          Length = 112797

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 194   tctctcactcacatgcatgcacagacac 221
             |||||| |||||||||||||||| ||||
Sbjct: 48283 tctctctctcacatgcatgcacacacac 48310
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>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence
          Length = 200841

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 189    ctctttctctcactcacatgcatgcaca 216
              ||||||||||||| |||||| |||||||
Sbjct: 185983 ctctttctctcacacacatgtatgcaca 185956
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>emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 in linkage group 9,
             complete sequence
          Length = 210207

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 187   ctctctttctctcactcacatgca 210
             |||||| |||||||||||||||||
Sbjct: 33709 ctctctctctctcactcacatgca 33732
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>gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome 19, complete sequence
          Length = 219212

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 197    ctcactcacatgcatgcaca 216
              ||||||||||||||||||||
Sbjct: 125201 ctcactcacatgcatgcaca 125182
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>gb|AC011352.6| Homo sapiens chromosome 5 clone CTC-327F10, complete sequence
          Length = 166644

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   cacatgcatgcacagacactgaac 226
             |||||||||||||| |||||||||
Sbjct: 86180 cacatgcatgcacacacactgaac 86203
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>gb|AC155171.7| Mus musculus BAC clone RP23-100A10 from chromosome 7, complete sequence
          Length = 193027

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    ctcactcacatgcatgcaca 216
              ||||||||||||||||||||
Sbjct: 182495 ctcactcacatgcatgcaca 182514
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>emb|AL512424.14| Human DNA sequence from clone RP11-453E2 on chromosome 10 Contains the
             5' end of the SLIT1 gene for slit homolog 1 (Drosophila),
             a novel gene and a CpG island, complete sequence
          Length = 172510

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   tggaggagcagtactgccaa 264
             ||||||||||||||||||||
Sbjct: 39310 tggaggagcagtactgccaa 39329
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>emb|AL356305.11| Human DNA sequence from clone RP11-109K20 on chromosome 13, complete
             sequence
          Length = 132436

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   ctctctttctctcactcacatgca 210
             ||||||||||||| ||||||||||
Sbjct: 87273 ctctctttctctctctcacatgca 87250
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>emb|AL354816.5| Human DNA sequence from clone RP11-540M5 on chromosome 13 Contains the
             3' end of the NUFIP1 gene for nuclear fragile X mental
             retardation protein interacting protein 1, complete
             sequence
          Length = 159285

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctctctttctctcactcaca 206
             ||||||||||||||||||||
Sbjct: 68226 ctctctttctctcactcaca 68207
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>gb|AF462446.1| Homo sapiens unknown mRNA
          Length = 1666

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 189 ctctttctctcactcacatgcatgcaca 216
           ||||| ||| ||||||||||||||||||
Sbjct: 241 ctcttcctcacactcacatgcatgcaca 214
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>emb|AL096708.34|HS1179L24 Human DNA sequence from clone RP5-1179L24 on chromosome 6q24.3-25.3
             Contains the PPP1R14C gene for protein phosphatase 1
             regulatory (inhibitor) subunit 14C (KEPI NY-BR-81
             CPI17-like), complete sequence
          Length = 107104

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   ctcactcacatgcatgcaca 216
             ||||||||||||||||||||
Sbjct: 32888 ctcactcacatgcatgcaca 32869
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>emb|AL031119.1|HS28C20 Human DNA sequence from clone RP1-28C20 on chromosome 6q24 Contains the
              3' end of a variant of the EPM2A gene for progressive
              myoclonus type 2 epilepsy (Lafora disease) protein
              (laforin) and a BTB/POZ domain zinc finger protein
              pseudogene, complete sequence
          Length = 115835

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    tgcatgcacagacactgaac 226
              ||||||||||||||||||||
Sbjct: 106284 tgcatgcacagacactgaac 106265
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>gb|AC164087.5| Mus musculus BAC clone RP23-408K7 from chromosome 9, complete sequence
          Length = 211783

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    gcctctctttctctcactca 204
              ||||||||||||||||||||
Sbjct: 151496 gcctctctttctctcactca 151477
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>emb|BX571708.4| Zebrafish DNA sequence from clone DKEYP-74B2, complete sequence
          Length = 193197

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   tggtggcctctctttctctc 199
             ||||||||||||||||||||
Sbjct: 79856 tggtggcctctctttctctc 79875
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>dbj|AP000570.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0711E10
          Length = 157903

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    cctctctttctctcactcac 205
              ||||||||||||||||||||
Sbjct: 104134 cctctctttctctcactcac 104115
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>emb|AJ416407.1|PVU416407 Phaseolus vulgaris microsatellite DNA, clone 210M3
          Length = 824

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 cctctctttctctcactcac 205
           ||||||||||||||||||||
Sbjct: 70  cctctctttctctcactcac 51
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>gb|AC011424.4| Homo sapiens chromosome 5 clone P1_1242F12, complete sequence
          Length = 84991

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 20    aataaattaataattcatgctcca 43
             |||| |||||||||||||||||||
Sbjct: 49447 aatagattaataattcatgctcca 49424
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>gb|AF407166.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (KEPI) gene,
             complete cds
          Length = 168856

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   ctcactcacatgcatgcaca 216
             ||||||||||||||||||||
Sbjct: 94640 ctcactcacatgcatgcaca 94621
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>gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, complete sequence
          Length = 202544

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    tggtggcctctctttctctc 199
              ||||||||||||||||||||
Sbjct: 112223 tggtggcctctctttctctc 112204
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>gb|AC005552.3| Homo sapiens chromosome 17, clone RP11-212E8, complete sequence
          Length = 165837

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 187    ctctctttctctcactcacatgcatgcacaga 218
              ||||||||||||| |||| |||||| ||||||
Sbjct: 131376 ctctctttctctctctcatatgcatacacaga 131345
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>gb|AC090720.5| Homo sapiens chromosome 11, clone RP11-768P16, complete sequence
          Length = 199255

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 188    tctctttctctcactcacatgcat 211
              |||||||| |||||||||||||||
Sbjct: 101185 tctctttcactcactcacatgcat 101208
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>gb|AC153570.9| Mus musculus 10 BAC RP23-221F6 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 216030

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 187  ctctctttctctcactcaca 206
            ||||||||||||||||||||
Sbjct: 6114 ctctctttctctcactcaca 6095
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>gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome 7, complete sequence
          Length = 196031

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    ctcactcacatgcatgcaca 216
              ||||||||||||||||||||
Sbjct: 142442 ctcactcacatgcatgcaca 142461
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>gb|AY423389.1| Canis familiaris BAC 231G24 MHC class I locus, partial sequence
          Length = 150102

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ctctctttctctcactcaca 206
              ||||||||||||||||||||
Sbjct: 136054 ctctctttctctcactcaca 136035
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>emb|AL512362.4|CNS07EFB Human chromosome 14 DNA sequence BAC R-716K17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168744

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 189   ctctttctctcactcacatgcatgcaca 216
             ||||| ||| ||||||||||||||||||
Sbjct: 37280 ctcttcctcacactcacatgcatgcaca 37253
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 187      ctctctttctctcactcacatgcatgca 214
                |||| |||||||| ||||||||||||||
Sbjct: 35825333 ctctttttctctctctcacatgcatgca 35825306
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     cctctctttctctcactcac 205
               ||||||||||||||||||||
Sbjct: 8528981 cctctctttctctcactcac 8528962
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>gb|AC012368.6| Homo sapiens BAC clone RP11-547M24 from 2, complete sequence
          Length = 196206

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 203    cacatgcatgcacagacact 222
              ||||||||||||||||||||
Sbjct: 179733 cacatgcatgcacagacact 179714
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>gb|AC155943.9| Mus musculus 10 BAC RP24-461P19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 158911

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ctctctttctctcactcaca 206
              ||||||||||||||||||||
Sbjct: 154388 ctctctttctctcactcaca 154369
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>gb|AC154434.2| Mus musculus BAC clone RP24-185H5 from chromosome 9, complete sequence
          Length = 192358

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gcctctctttctctcactca 204
              ||||||||||||||||||||
Sbjct: 151956 gcctctctttctctcactca 151975
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>gb|AC116738.25| Mus musculus chromosome 5, clone RP23-418D19, complete sequence
          Length = 193386

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ctctctttctctcactcaca 206
              ||||||||||||||||||||
Sbjct: 130127 ctctctttctctcactcaca 130146
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>emb|BX927359.1| Human chromosome 14 DNA sequence BAC R-614O9 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173641

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 189    ctctttctctcactcacatgcatgcaca 216
              ||||| ||| ||||||||||||||||||
Sbjct: 143030 ctcttcctcacactcacatgcatgcaca 143057
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>emb|BX000358.11| Zebrafish DNA sequence from clone DKEY-77A20 in linkage group 2, complete
              sequence
          Length = 181081

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    ctctctttctctcactcaca 206
              ||||||||||||||||||||
Sbjct: 118341 ctctctttctctcactcaca 118360
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>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0705D01
          Length = 147174

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 186    cctctctttctctcactcac 205
              ||||||||||||||||||||
Sbjct: 143936 cctctctttctctcactcac 143917
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>gb|AC009134.6|AC009134 Homo sapiens chromosome 16 clone RP11-505I1, complete sequence
          Length = 193236

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   cctctctttctctcactcac 205
             ||||||||||||||||||||
Sbjct: 67089 cctctctttctctcactcac 67108
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>emb|BX537274.3| Zebrafish DNA sequence from clone DKEY-103L3 in linkage group 13,
            complete sequence
          Length = 151298

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 180  tggtggcctctctttctctc 199
            ||||||||||||||||||||
Sbjct: 5322 tggtggcctctctttctctc 5303
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>emb|BX649514.8| Zebrafish DNA sequence from clone CH211-232P6 in linkage group 4,
             complete sequence
          Length = 152488

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   ctctctttctctcactcaca 206
             ||||||||||||||||||||
Sbjct: 37631 ctctctttctctcactcaca 37612
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>emb|AJ303349.1|CRU303349 Capsella rubella ORF1, ORF2, ORF3, ORF4, ORF5 and ORF6 (partial)
          Length = 27056

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 cctctctttctctcactcac 205
           ||||||||||||||||||||
Sbjct: 398 cctctctttctctcactcac 379
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>gb|U91325.1|HSU91325 Human chromosome 16p13.11 BAC clone CIT987SK-731F11 complete sequence
          Length = 135046

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   cctctctttctctcactcac 205
             ||||||||||||||||||||
Sbjct: 65574 cctctctttctctcactcac 65555
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>emb|BX897748.11| Zebrafish DNA sequence from clone CH211-152M4 in linkage group 4,
             complete sequence
          Length = 64422

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 199   cactcacatgcatgcacagacact 222
             |||||||||||||||||| |||||
Sbjct: 53392 cactcacatgcatgcacatacact 53369
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>emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in linkage group 14,
              complete sequence
          Length = 179663

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     cggttttacaggttcaatcc 87
              ||||||||||||||||||||
Sbjct: 113082 cggttttacaggttcaatcc 113101
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>emb|BX901962.8| Zebrafish DNA sequence from clone DKEY-153K10 in linkage group 4,
              complete sequence
          Length = 182550

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 187    ctctctttctctcactcaca 206
              ||||||||||||||||||||
Sbjct: 131408 ctctctttctctcactcaca 131389
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>emb|CR847890.19| Zebrafish DNA sequence from clone DKEYP-70H9 in linkage group 14,
             complete sequence
          Length = 217550

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    acaataaattaataattcat 37
             ||||||||||||||||||||
Sbjct: 64381 acaataaattaataattcat 64400
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>emb|CT573039.4| Wallaby DNA sequence from clone MEKBa-403O8, complete sequence
          Length = 76601

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 187   ctctctttctctcactcacatgcatgcacagacact 222
             |||||| ||||||  || ||||||||||||||||||
Sbjct: 41062 ctctctctctctctttctcatgcatgcacagacact 41027
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>gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome 14, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    cactcacatgcatgcacaga 218
              ||||||||||||||||||||
Sbjct: 125435 cactcacatgcatgcacaga 125416
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>emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, complete sequence
          Length = 152080

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   ctctctttctctcactcacatgca 210
             |||||| |||||||||||||||||
Sbjct: 19949 ctctctctctctcactcacatgca 19926
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>gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, complete sequence
          Length = 184279

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    cactcacatgcatgcacagacact 222
              |||||||||||||||||| |||||
Sbjct: 101679 cactcacatgcatgcacacacact 101656
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>emb|AL732614.15| Mouse DNA sequence from clone RP23-322G17 on chromosome 4, complete
              sequence
          Length = 218910

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    ctcactcacatgcatgcaca 216
              ||||||||||||||||||||
Sbjct: 112895 ctcactcacatgcatgcaca 112914
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>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete
              sequence
          Length = 218753

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     cacacaataaattaataatt 34
              ||||||||||||||||||||
Sbjct: 208348 cacacaataaattaataatt 208329
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>gb|AC002209.1|AC002209 Homo sapiens (subclone 2_e10 from P1 H31) DNA sequence, complete
            sequence
          Length = 4858

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 20   aataaattaataattcatgctcca 43
            |||| |||||||||||||||||||
Sbjct: 4251 aatagattaataattcatgctcca 4274
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>dbj|AP004503.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02M03, TM0034a,
             complete sequence
          Length = 83232

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   tctctttctctcactcacat 207
             ||||||||||||||||||||
Sbjct: 42470 tctctttctctcactcacat 42489
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>emb|AL928882.10| Mouse DNA sequence from clone RP23-281I20 on chromosome 2, complete
             sequence
          Length = 147002

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    acacaataaattaataattc 35
             ||||||||||||||||||||
Sbjct: 83233 acacaataaattaataattc 83214
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>emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chromosome 2, complete
              sequence
          Length = 226854

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    cactcacatgcatgcacagacact 222
              |||||||||||||||||| |||||
Sbjct: 145489 cactcacatgcatgcacacacact 145466
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>gb|AC151905.4| Mus musculus BAC clone RP23-205J22 from chromosome 8, complete sequence
          Length = 214760

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 189   ctctttctctcactcacatgcatgcaca 216
             ||||||||||||| |||||| |||||||
Sbjct: 91236 ctctttctctcacacacatgtatgcaca 91263


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,059,413
Number of Sequences: 3902068
Number of extensions: 3059413
Number of successful extensions: 83755
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83554
Number of HSP's gapped (non-prelim): 201
length of query: 317
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 295
effective length of database: 17,147,199,772
effective search space: 5058423932740
effective search space used: 5058423932740
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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