ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet10d04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 311 4e-82
2gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 311 4e-82
3emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 264 8e-68
4emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 260 1e-66
5emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 155 5e-35
6gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 155 5e-35
7emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 133 2e-28
8gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 101 7e-19
9gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 66 4e-08
10gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 66 4e-08
11gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, com... 44 0.14
12gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, com... 44 0.14
13gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cance... 44 0.14
14gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, co... 44 0.14
15gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome... 42 0.55
16gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, comple... 42 0.55
17emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for gluco... 40 2.2
18gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, compl... 40 2.2
19gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, compl... 40 2.2
20gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, co... 40 2.2
21gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inne... 40 2.2
22gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferas... 40 2.2
23ref|XM_512613.1| PREDICTED: Pan troglodytes similar to zinc fing... 38 8.6
24ref|NM_001031075.1| Gallus gallus RWD domain containing 1 (RWDD1... 38 8.6
25ref|NM_152604.1| Homo sapiens zinc finger protein 383 (ZNF383), ... 38 8.6
26gb|AC149417.1| Phakopsora pachyrhizi clone JGIAFNA-77J13, comple... 38 8.6
27ref|XM_589815.2| PREDICTED: Bos taurus similar to zinc finger pr... 38 8.6
28ref|XM_710605.1| Candida albicans SC5314 hypothetical protein (C... 38 8.6
29gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, comp... 38 8.6
30gb|AY260141.1| Homo sapiens HSD17 mRNA, complete cds 38 8.6
31gb|AY212249.1| Anabaena sp. 90 hypothetical protein genes, compl... 38 8.6
32gb|AC006387.3| Homo sapiens BAC clone CTA-360L10 from 7, complet... 38 8.6
33gb|AC146037.1| Pan troglodytes BAC clone RP43-44A5 from 7, compl... 38 8.6
34gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosom... 38 8.6
35gb|AY438646.1| Homo sapiens zinc finger protein 383 mRNA, comple... 38 8.6
36emb|Z73907.1|CEF29D11 Caenorhabditis elegans Cosmid F29D11, comp... 38 8.6
37gb|AC104102.4| Mus musculus BAC clone RP24-377I13 from 15, compl... 38 8.6
38ref|XM_645334.1| Entamoeba histolytica HM-1:IMSS conserved hypot... 38 8.6
39gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.6
40ref|XM_862512.1| PREDICTED: Canis familiaris similar to Hypothet... 38 8.6
41ref|XM_862503.1| PREDICTED: Canis familiaris similar to Hypothet... 38 8.6
42gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, c... 38 8.6
43gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, com... 38 8.6
44gb|AC138134.6| Mus musculus strain C57BL/6J clone rp23-382i2 map... 38 8.6
45emb|AL160151.16| Human DNA sequence from clone RP11-168G22 on ch... 38 8.6
46emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chr... 38 8.6
47emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 38 8.6
48emb|AJ536156.1|ASP536156 Anabaena sp. 90 microcystin synthesis g... 38 8.6
49gb|AC129803.3| Homo sapiens 3 BAC RP11-15N24 (Roswell Park Cance... 38 8.6
50emb|AJ720663.1| Gallus gallus mRNA for hypothetical protein, clo... 38 8.6
51gb|AC154410.2| Mus musculus BAC clone RP23-168K22 from chromosom... 38 8.6
52dbj|AK122892.1| Homo sapiens cDNA FLJ16547 fis, clone PERIC20090... 38 8.6
53dbj|AK091760.1| Homo sapiens cDNA FLJ34441 fis, clone HLUNG20014... 38 8.6
54dbj|AK093182.1| Homo sapiens cDNA FLJ35863 fis, clone TESTI20075... 38 8.6
55gb|AC092656.1| Homo sapiens BAC clone RP11-455G16 from 4, comple... 38 8.6
56gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, comp... 38 8.6
57dbj|AB169263.1| Macaca fascicularis testis cDNA, clone: QtsA-183... 38 8.6
58dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.6
59gb|AC149286.4| Pan troglodytes BAC clone CH251-514L10 from chrom... 38 8.6
60gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M... 38 8.6
61gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complet... 38 8.6
62gb|AC137643.3| Homo sapiens chromosome 16 clone RP11-95H3, compl... 38 8.6
63gb|AC078818.19| Homo sapiens 12 BAC RP11-189H16 (Roswell Park Ca... 38 8.6
64dbj|AP000382.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 38 8.6
65gb|AC151055.3| Mus musculus BAC clone RP23-24A9 from 6, complete... 38 8.6
66dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 8.6
67gb|AC101658.8| Mus musculus chromosome 7, clone RP23-470G18, com... 38 8.6
68gb|AC159965.5| Mus musculus chromosome 15, clone RP23-471C16, co... 38 8.6
69gb|AC174450.2| Mus musculus BAC clone RP23-116E13 from chromosom... 38 8.6
70emb|BX000489.8| Zebrafish DNA sequence from clone CH211-215E19, ... 38 8.6
71gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.6
72emb|CT030726.4| Mouse DNA sequence from clone RP24-465G11 on chr... 38 8.6
73emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr... 38 8.6
74dbj|AP000884.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 38 8.6 
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  311 bits (157), Expect = 4e-82
 Identities = 163/165 (98%)
 Strand = Plus / Minus

                                                                       
Query: 12  cttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaagg 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaagg 556

                                                                       
Query: 72  gaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaa 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaa 496

                                                        
Query: 132 gattattcaagacaaaatgactatacgaccttggccatagaaatc 176
           ||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 495 gattattcaagacaaaatgacaatacgaccatggccatagaaatc 451
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>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  311 bits (157), Expect = 4e-82
 Identities = 163/165 (98%)
 Strand = Plus / Minus

                                                                        
Query: 12   cttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaagg 71
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2315 cttttatattaagccaagggtacaaatagattcatcgtggcgactcttgttggaacaagg 2256

                                                                        
Query: 72   gaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaa 131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2255 gaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaa 2196

                                                         
Query: 132  gattattcaagacaaaatgactatacgaccttggccatagaaatc 176
            ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2195 gattattcaagacaaaatgacaatacgaccttggccatagaaatc 2151
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>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  264 bits (133), Expect = 8e-68
 Identities = 157/165 (95%)
 Strand = Plus / Minus

                                                                       
Query: 12  cttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaagg 71
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 622 cttttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaagg 563

                                                                       
Query: 72  gaaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaa 131
           |||||| | |||| ||||||||||||||||||||  |||| |||||||||||||||||||
Sbjct: 562 gaaaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaa 503

                                                        
Query: 132 gattattcaagacaaaatgactatacgaccttggccatagaaatc 176
           ||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 502 gattattcaagacaaaatgacaatacgaccttggccatagaaatc 458
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>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  260 bits (131), Expect = 1e-66
 Identities = 155/163 (95%)
 Strand = Plus / Minus

                                                                       
Query: 14  tttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaaggga 73
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381

                                                                       
Query: 74  aaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatcaaga 133
           |||| | |||| ||||||||||||||||||||  |||| |||||||||||||||||||||
Sbjct: 380 aaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaaga 321

                                                      
Query: 134 ttattcaagacaaaatgactatacgaccttggccatagaaatc 176
           ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 ttattcaagacaaaatgacaatacgaccttggccatagaaatc 278
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>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  155 bits (78), Expect = 5e-35
 Identities = 146/166 (87%), Gaps = 2/166 (1%)
 Strand = Plus / Minus

                                                                       
Query: 12  cttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaagg 71
           |||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| |||
Sbjct: 481 cttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaacgagg 422

                                                                       
Query: 72  g-aaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatca 130
           | ||||| | |||||||||| |||||||||||||| ||||| || | | |||||||||||
Sbjct: 421 gaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatca 363

                                                         
Query: 131 agattattcaagacaaaatgactatacgaccttggccatagaaatc 176
           ||||| || || | |||||||  | |||||||||||||||||||||
Sbjct: 362 agattgttgaacagaaaatgaaaaaacgaccttggccatagaaatc 317
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>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  155 bits (78), Expect = 5e-35
 Identities = 146/166 (87%), Gaps = 2/166 (1%)
 Strand = Plus / Minus

                                                                       
Query: 12  cttttatattaagccaagggtacaaatagattcatcgtggcgactcttattggaacaagg 71
           |||||||||||||||||||||| |||||||||||||||||   ||||||||||||| |||
Sbjct: 640 cttttatattaagccaagggtataaatagattcatcgtgggttctcttattggaacgagg 581

                                                                       
Query: 72  g-aaaaagacaaatacataagtaagatgatacattggcttccatacagctgatggtatca 130
           | ||||| | |||||||||| |||||||||||||| ||||| || | | |||||||||||
Sbjct: 580 gaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtatca 522

                                                         
Query: 131 agattattcaagacaaaatgactatacgaccttggccatagaaatc 176
           ||||| || || | |||||||| | |||||||||||||||||||||
Sbjct: 521 agattgttgaacagaaaatgacaaaacgaccttggccatagaaatc 476
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>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  133 bits (67), Expect = 2e-28
 Identities = 126/143 (88%), Gaps = 2/143 (1%)
 Strand = Plus / Minus

                                                                       
Query: 35  aaatagattcatcgtggcgactcttattggaacaaggg-aaaaagacaaatacataagta 93
           ||||||||||||||||||||||||||||||||| |||| ||||| | |||||||||| ||
Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485

                                                                       
Query: 94  agatgatacattggcttccatacagctgatggtatcaagattattcaagacaaaatgact 153
           |||||||||||| ||||| ||   | |||||||||||||||| || || | |||||||| 
Sbjct: 484 agatgatacatttgcttcgat-gtggtgatggtatcaagattgttgaacagaaaatgaca 426

                                  
Query: 154 atacgaccttggccatagaaatc 176
           | |||||||||||||||||||||
Sbjct: 425 aaacgaccttggccatagaaatc 403
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>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  101 bits (51), Expect = 7e-19
 Identities = 107/123 (86%), Gaps = 2/123 (1%)
 Strand = Plus / Minus

                                                                       
Query: 55  ctcttattggaacaagggaaaaag-acaaatacataagtaagatgatacattggcttcca 113
           ||||||||||||| |||||||||  | |||||||||| |||||||||||||| ||||| |
Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538

                                                                       
Query: 114 tacagctgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaa 173
           | | | |||||||||||||||| || || | |||||||| | ||||||||||||||||||
Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479

              
Query: 174 atc 176
           |||
Sbjct: 478 atc 476
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>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 120  tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatc 176
            |||||||||||||||| || || | |||||||| | |||||||||||||||||||||
Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatc 2174
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>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score = 65.9 bits (33), Expect = 4e-08
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                    
Query: 120 tgatggtatcaagattattcaagacaaaatgactatacgaccttggccatagaaatc 176
           |||||||||||||||| || || | |||||||| | |||||||||||||||||||||
Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatc 476
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>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence
          Length = 264425

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 66   acaagggaaaaagacaaataca 87
            ||||||||||||||||||||||
Sbjct: 6908 acaagggaaaaagacaaataca 6887
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>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence
          Length = 211521

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 66    acaagggaaaaagacaaataca 87
             ||||||||||||||||||||||
Sbjct: 86367 acaagggaaaaagacaaataca 86346
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>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159706

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 68    aagggaaaaagacaaatacata 89
             ||||||||||||||||||||||
Sbjct: 85293 aagggaaaaagacaaatacata 85272
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>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence
          Length = 240821

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 66    acaagggaaaaagacaaataca 87
             ||||||||||||||||||||||
Sbjct: 41781 acaagggaaaaagacaaataca 41802
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>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence
          Length = 155706

 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 66     acaagggaaaaagacaaatacataa 90
              |||||||||||||| ||||||||||
Sbjct: 114727 acaagggaaaaagaaaaatacataa 114751
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>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence
          Length = 179399

 Score = 42.1 bits (21), Expect = 0.55
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 66    acaagggaaaaagacaaatacataa 90
             |||||||||||||| ||||||||||
Sbjct: 54540 acaagggaaaaagaaaaatacataa 54564
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>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and
            glucosyltransferase S
          Length = 10125

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  tacagctgatggtatcaaga 133
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469
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>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence
          Length = 31443

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ggaaaaagacaaatacataa 90
             ||||||||||||||||||||
Sbjct: 11773 ggaaaaagacaaatacataa 11792
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>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence
          Length = 163612

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ggaaaaagacaaatacataa 90
              ||||||||||||||||||||
Sbjct: 160156 ggaaaaagacaaatacataa 160175
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>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence
          Length = 192355

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     acaaatacataagtaagatg 98
              ||||||||||||||||||||
Sbjct: 111212 acaaatacataagtaagatg 111193
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>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR)
            gene, 5' UTR, exons 1 and 2
          Length = 5132

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 71   ggaaaaagacaaatacataa 90
            ||||||||||||||||||||
Sbjct: 4760 ggaaaaagacaaatacataa 4779
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>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete
            cds, and gtfK gene, 5' end
          Length = 4941

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  tacagctgatggtatcaaga 133
            ||||||||||||||||||||
Sbjct: 2450 tacagctgatggtatcaaga 2469
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>ref|XM_512613.1| PREDICTED: Pan troglodytes similar to zinc finger protein 383
           (LOC455977), mRNA
          Length = 1980

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 720 cttattggaacaagggaaa 738
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>ref|NM_001031075.1| Gallus gallus RWD domain containing 1 (RWDD1), mRNA
          Length = 2395

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 106  ggcttccatacagctgatg 124
            |||||||||||||||||||
Sbjct: 1880 ggcttccatacagctgatg 1862
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>ref|NM_152604.1| Homo sapiens zinc finger protein 383 (ZNF383), mRNA
          Length = 1694

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 426 cttattggaacaagggaaa 444
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>gb|AC149417.1| Phakopsora pachyrhizi clone JGIAFNA-77J13, complete sequence
          Length = 32547

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 120  tgatggtatcaagattatt 138
            |||||||||||||||||||
Sbjct: 9733 tgatggtatcaagattatt 9751
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>ref|XM_589815.2| PREDICTED: Bos taurus similar to zinc finger protein 383,
           transcript variant 1 (LOC539847), mRNA
          Length = 1502

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 211 cttattggaacaagggaaa 229
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>ref|XM_710605.1| Candida albicans SC5314 hypothetical protein (CaO19_1935), mRNA
          Length = 447

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 130 aagattattcaagacaaaa 148
           |||||||||||||||||||
Sbjct: 320 aagattattcaagacaaaa 338
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>gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, complete sequence
          Length = 252563

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 78     gacaaatacataagtaaga 96
              |||||||||||||||||||
Sbjct: 156413 gacaaatacataagtaaga 156395
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>gb|AY260141.1| Homo sapiens HSD17 mRNA, complete cds
          Length = 1489

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 221 cttattggaacaagggaaa 239
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>gb|AY212249.1| Anabaena sp. 90 hypothetical protein genes, complete cds; microcystin
             biosynthesis gene cluster, complete sequence; and putative
             transposase (atn1) gene, complete cds
          Length = 57817

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    aagccaagggtacaaatag 40
             |||||||||||||||||||
Sbjct: 43348 aagccaagggtacaaatag 43330
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>gb|AC006387.3| Homo sapiens BAC clone CTA-360L10 from 7, complete sequence
          Length = 138764

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 76     aagacaaatacataagtaa 94
              |||||||||||||||||||
Sbjct: 138112 aagacaaatacataagtaa 138130
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>gb|AC146037.1| Pan troglodytes BAC clone RP43-44A5 from 7, complete sequence
          Length = 177637

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 76     aagacaaatacataagtaa 94
              |||||||||||||||||||
Sbjct: 157810 aagacaaatacataagtaa 157792
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>gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosome 6, complete sequence
          Length = 162905

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 69     agggaaaaagacaaataca 87
              |||||||||||||||||||
Sbjct: 104897 agggaaaaagacaaataca 104879
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>gb|AY438646.1| Homo sapiens zinc finger protein 383 mRNA, complete cds
          Length = 1694

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 426 cttattggaacaagggaaa 444
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>emb|Z73907.1|CEF29D11 Caenorhabditis elegans Cosmid F29D11, complete sequence
          Length = 29910

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 72   gaaaaagacaaatacataa 90
            |||||||||||||||||||
Sbjct: 2622 gaaaaagacaaatacataa 2640
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>gb|AC104102.4| Mus musculus BAC clone RP24-377I13 from 15, complete sequence
          Length = 187284

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     atgatacattggcttccat 114
              |||||||||||||||||||
Sbjct: 133012 atgatacattggcttccat 133030
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>ref|XM_645334.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
           (220.t00004) partial mRNA
          Length = 5694

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 126 tatcaagattattcaagacaaaa 148
           |||||||| ||||||||||||||
Sbjct: 292 tatcaagaatattcaagacaaaa 314
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>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0041L19, complete sequence
          Length = 155086

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 68     aagggaaaaagacaaatacataa 90
              ||||||| |||||||||||||||
Sbjct: 117303 aagggaacaagacaaatacataa 117281
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>ref|XM_862512.1| PREDICTED: Canis familiaris similar to Hypothetical zinc finger
           protein KIAA1559, transcript variant 5 (LOC484560), mRNA
          Length = 2619

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 150 cttattggaacaagggaaa 168
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>ref|XM_862503.1| PREDICTED: Canis familiaris similar to Hypothetical zinc finger
           protein KIAA1559, transcript variant 4 (LOC484560), mRNA
          Length = 5256

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 150 cttattggaacaagggaaa 168
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>gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, complete sequence
          Length = 228367

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 67     caagggaaaaagacaaata 85
              |||||||||||||||||||
Sbjct: 179782 caagggaaaaagacaaata 179764
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>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence
          Length = 230870

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 126   tatcaagattattcaagac 144
             |||||||||||||||||||
Sbjct: 76403 tatcaagattattcaagac 76385
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>gb|AC138134.6| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete
            sequence
          Length = 202316

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 78   gacaaatacataagtaaga 96
            |||||||||||||||||||
Sbjct: 2613 gacaaatacataagtaaga 2595
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>emb|AL160151.16| Human DNA sequence from clone RP11-168G22 on chromosome 13 Contains a
              ribosomal protein L32 (RPL32) pseudogene, the 3' end of a
              novel gene and two novel genes, complete sequence
          Length = 154530

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     acaagggaaaaagacaaat 84
              |||||||||||||||||||
Sbjct: 131178 acaagggaaaaagacaaat 131160
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>emb|AL157826.8| Human DNA sequence from clone RP11-176P17 on chromosome 9p22.3-24.1
             Contains part of a variant of the PTPRD gene for protein
             tyrosine phosphatase, receptor type, D (HPTP, PTPD,
             HPTPD), complete sequence
          Length = 149087

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 140   aagacaaaatgactatacg 158
             |||||||||||||||||||
Sbjct: 10242 aagacaaaatgactatacg 10224
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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 49     tggcgactcttattggaac 67
              |||||||||||||||||||
Sbjct: 864323 tggcgactcttattggaac 864341
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>emb|AJ536156.1|ASP536156 Anabaena sp. 90 microcystin synthesis gene cluster
          Length = 57817

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    aagccaagggtacaaatag 40
             |||||||||||||||||||
Sbjct: 43348 aagccaagggtacaaatag 43330
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>gb|AC129803.3| Homo sapiens 3 BAC RP11-15N24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 185721

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 72    gaaaaagacaaatacataagtaa 94
             ||||||||||||||||| |||||
Sbjct: 11472 gaaaaagacaaatacattagtaa 11450
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>emb|AJ720663.1| Gallus gallus mRNA for hypothetical protein, clone 23b3
          Length = 2395

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 106  ggcttccatacagctgatg 124
            |||||||||||||||||||
Sbjct: 1880 ggcttccatacagctgatg 1862
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>gb|AC154410.2| Mus musculus BAC clone RP23-168K22 from chromosome 13, complete
             sequence
          Length = 182242

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    cttattggaacaagggaaa 75
             |||||||||||||||||||
Sbjct: 51902 cttattggaacaagggaaa 51884
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>dbj|AK122892.1| Homo sapiens cDNA FLJ16547 fis, clone PERIC2009001, moderately
           similar to M.domesticus (C57Bl/6J) mRNA for zinc finger
           protein 30
          Length = 2269

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 752 cttattggaacaagggaaa 770
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>dbj|AK091760.1| Homo sapiens cDNA FLJ34441 fis, clone HLUNG2001459, moderately
            similar to ZINC FINGER PROTEIN 135
          Length = 2241

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   cttattggaacaagggaaa 75
            |||||||||||||||||||
Sbjct: 987  cttattggaacaagggaaa 1005
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>dbj|AK093182.1| Homo sapiens cDNA FLJ35863 fis, clone TESTI2007524, moderately
           similar to HYPOTHETICAL ZINC FINGER PROTEIN
          Length = 1694

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 426 cttattggaacaagggaaa 444
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>gb|AC092656.1| Homo sapiens BAC clone RP11-455G16 from 4, complete sequence
          Length = 191840

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 65    aacaagggaaaaagacaaa 83
             |||||||||||||||||||
Sbjct: 50928 aacaagggaaaaagacaaa 50910
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>gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, complete sequence
          Length = 170020

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     cttattggaacaagggaaa 75
              |||||||||||||||||||
Sbjct: 149235 cttattggaacaagggaaa 149253
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>dbj|AB169263.1| Macaca fascicularis testis cDNA, clone: QtsA-18358, similar to
           human zinc finger protein 383 (ZNF383), mRNA, RefSeq:
           NM_152604.1
          Length = 1691

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 57  cttattggaacaagggaaa 75
           |||||||||||||||||||
Sbjct: 393 cttattggaacaagggaaa 411
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 68       aagggaaaaagacaaatacataa 90
                ||||||| |||||||||||||||
Sbjct: 24640401 aagggaacaagacaaatacataa 24640379
to top
>gb|AC149286.4| Pan troglodytes BAC clone CH251-514L10 from chromosome 7, complete
             sequence
          Length = 180713

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    aagacaaatacataagtaa 94
             |||||||||||||||||||
Sbjct: 68106 aagacaaatacataagtaa 68124
to top
>gb|AC079041.4|AC079041 Arabidopsis thaliana chromosome 1 BAC F5M6 genomic sequence, complete
             sequence
          Length = 119420

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    aagacaaatacataagtaa 94
             |||||||||||||||||||
Sbjct: 42370 aagacaaatacataagtaa 42388
to top
>gb|AC009975.9| Homo sapiens BAC clone RP11-460M2 from 2, complete sequence
          Length = 211305

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     aacaagggaaaaagacaaa 83
              |||||||||||||||||||
Sbjct: 146904 aacaagggaaaaagacaaa 146922
to top
>gb|AC137643.3| Homo sapiens chromosome 16 clone RP11-95H3, complete sequence
          Length = 159836

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 69    agggaaaaagacaaataca 87
             |||||||||||||||||||
Sbjct: 25283 agggaaaaagacaaataca 25301
to top
>gb|AC078818.19| Homo sapiens 12 BAC RP11-189H16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 139931

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 67    caagggaaaaagacaaatacata 89
             ||||||||||| |||||||||||
Sbjct: 84474 caagggaaaaatacaaatacata 84452
to top
>dbj|AP000382.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K7M2
          Length = 80393

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    gaaaaagacaaatacataa 90
             |||||||||||||||||||
Sbjct: 70078 gaaaaagacaaatacataa 70060
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>gb|AC151055.3| Mus musculus BAC clone RP23-24A9 from 6, complete sequence
          Length = 230998

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 69  agggaaaaagacaaataca 87
           |||||||||||||||||||
Sbjct: 932 agggaaaaagacaaataca 914
to top
>dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, section 51/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 73     aaaaagacaaatacataagtaag 95
              |||||||||||||||||| ||||
Sbjct: 223254 aaaaagacaaatacataaataag 223232
to top
>gb|AC101658.8| Mus musculus chromosome 7, clone RP23-470G18, complete sequence
          Length = 185449

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 126    tatcaagattattcaagac 144
              |||||||||||||||||||
Sbjct: 178878 tatcaagattattcaagac 178860
to top
>gb|AC159965.5| Mus musculus chromosome 15, clone RP23-471C16, complete sequence
          Length = 173156

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    atgatacattggcttccat 114
             |||||||||||||||||||
Sbjct: 53749 atgatacattggcttccat 53767
to top
>gb|AC174450.2| Mus musculus BAC clone RP23-116E13 from chromosome 13, complete
             sequence
          Length = 200641

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    cttattggaacaagggaaa 75
             |||||||||||||||||||
Sbjct: 31233 cttattggaacaagggaaa 31215
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>emb|BX000489.8| Zebrafish DNA sequence from clone CH211-215E19, complete sequence
          Length = 201748

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 130    aagattattcaagacaaaa 148
              |||||||||||||||||||
Sbjct: 129108 aagattattcaagacaaaa 129090
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 68       aagggaaaaagacaaatacataa 90
                ||||||| |||||||||||||||
Sbjct: 24952071 aagggaacaagacaaatacataa 24952049
to top
>emb|CT030726.4| Mouse DNA sequence from clone RP24-465G11 on chromosome 13, complete
             sequence
          Length = 156720

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    cttattggaacaagggaaa 75
             |||||||||||||||||||
Sbjct: 87719 cttattggaacaagggaaa 87701
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>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
             sequence
          Length = 220275

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    aagggaaaaagacaaatac 86
             |||||||||||||||||||
Sbjct: 31290 aagggaaaaagacaaatac 31272
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>dbj|AP000884.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B463J19, SOD-AML
             region, complete sequence
          Length = 137955

 Score = 38.2 bits (19), Expect = 8.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 73    aaaaagacaaatacataagtaag 95
             |||||||||||||||||| ||||
Sbjct: 66565 aaaaagacaaatacataaataag 66543


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,777,415
Number of Sequences: 3902068
Number of extensions: 1777415
Number of successful extensions: 139977
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139715
Number of HSP's gapped (non-prelim): 255
length of query: 176
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 154
effective length of database: 17,147,199,772
effective search space: 2640668764888
effective search space used: 2640668764888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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