ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaet10c06 |
|---|---|
| Clone Library Name | barley_pub |
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 246 HLADPVNNNAWAFATNFVPGK 266
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 246 HLADPVNNNAWAFATNFVPGK 266
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 246 HLADPVNNNAWAFATNFVPGK 266
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 245 HLADPVNNNAWAFATNFVPGK 265
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 245 HLADPVNNNAWAFATNFVPGK 265
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 245 HLADPVNNNAWAFATNFVPGK 265
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 104 HLADPVNNNAWAFATNFVPGK 124
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 244 HLADPVNNNAWAFATNFVPGK 264
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 244 HLADPVNNNAWAFATNFVPGK 264
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 247 HLADPVNNNAWAFATNFVPGK 267
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 247 HLADPVNNNAWAFATNFVPGK 267
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 48.1 bits (113), Expect = 6e-06 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWAFATNFVPGK Sbjct: 247 HLADPVNNNAWAFATNFVPGK 267
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 47.4 bits (111), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPVNN AWAFATNFVPGK Sbjct: 247 HIADPVNNNAWAFATNFVPGK 267
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 47.4 bits (111), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPVNN AWAFATNFVPGK Sbjct: 247 HIADPVNNNAWAFATNFVPGK 267
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 235 HLADPVNNNAWAYATNFVPGK 255
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 241 HLADPVNNNAWAYATNFVPGK 261
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 258 HLADPVNNNAWAYATNFVPGK 278
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 258 HLADPVNNNAWAYATNFVPGK 278
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 245 HLADPVNNNAWAYATNFVPGK 265
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 245 HLADPVNNNAWAYATNFVPGK 265
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 245 HLADPVNNNAWAYATNFVPGK 265
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 254 HLADPVNNNAWAYATNFVPGK 274
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 186 HLADPVNNNAWAYATNFVPGK 206
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 247 HLADPVNNNAWAYATNFVPGK 267
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 247 HLADPVNNNAWAYATNFVPGK 267
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 47.0 bits (110), Expect = 1e-05 Identities = 19/21 (90%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+ATNFVPGK Sbjct: 247 HLADPVNNNAWAYATNFVPGK 267
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 46.2 bits (108), Expect = 2e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPVNN AWA+ATNFVPGK Sbjct: 245 HIADPVNNNAWAYATNFVPGK 265
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/21 (90%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW FATNFVPGK Sbjct: 247 HLADPVNNNAWNFATNFVPGK 267
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 247 HLADPVNNNAWSYATNFVPGK 267
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 247 HLADPVNNNAWSYATNFVPGK 267
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 247 HLADPVNNNAWSYATNFVPGK 267
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 96 HLADPVNNNAWSYATNFVPGK 116
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 246 HLADPVNNNAWSYATNFVPGK 266
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 246 HLADPVNNNAWSYATNFVPGK 266
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 208 HLADPVNNNAWSYATNFVPGK 228
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 45.8 bits (107), Expect = 3e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AW++ATNFVPGK Sbjct: 249 HLADPVNNNAWSYATNFVPGK 269
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 45.4 bits (106), Expect = 4e-05 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HL DPVNN AWA+ATNFVPGK Sbjct: 244 HLTDPVNNNAWAYATNFVPGK 264
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 45.4 bits (106), Expect = 4e-05 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLA+PVNN AWA+ATNFVPGK Sbjct: 225 HLAEPVNNNAWAYATNFVPGK 245
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 44.7 bits (104), Expect = 7e-05 Identities = 17/21 (80%), Positives = 20/21 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HL+DPVNN AW++ATNFVPGK Sbjct: 248 HLSDPVNNNAWSYATNFVPGK 268
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 44.3 bits (103), Expect = 9e-05 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLA PVNN AWA+ATNFVPGK Sbjct: 243 HLAGPVNNNAWAYATNFVPGK 263
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 44.3 bits (103), Expect = 9e-05 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPV N AWAFATNFVPGK Sbjct: 244 HIADPVANNAWAFATNFVPGK 264
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 44.3 bits (103), Expect = 9e-05 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPG 160 H+ADPVNN AWA+ATNFVPG Sbjct: 242 HIADPVNNNAWAYATNFVPG 261
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 43.9 bits (102), Expect = 1e-04 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPV N AWA+ATNFVPGK Sbjct: 246 HLADPVANNAWAYATNFVPGK 266
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 43.9 bits (102), Expect = 1e-04 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPV N AWAFATNFVPGK Sbjct: 245 HVADPVANNAWAFATNFVPGK 265
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 43.9 bits (102), Expect = 1e-04 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPV N AWA+ATNFVPGK Sbjct: 245 HLADPVANNAWAYATNFVPGK 265
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 43.9 bits (102), Expect = 1e-04 Identities = 18/21 (85%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPV N AWA+ATNFVPGK Sbjct: 130 HLADPVANNAWAYATNFVPGK 150
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 43.1 bits (100), Expect = 2e-04 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPVNN AW ATNFVPGK Sbjct: 246 HIADPVNNNAWLIATNFVPGK 266
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 43.1 bits (100), Expect = 2e-04 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPV N AWA+ATNFVPGK Sbjct: 217 HIADPVANNAWAYATNFVPGK 237
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 42.7 bits (99), Expect = 3e-04 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPV N AWA+ATNFVPGK Sbjct: 245 HVADPVANNAWAYATNFVPGK 265
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 42.7 bits (99), Expect = 3e-04 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPV N AWA+ATNFVPGK Sbjct: 243 HVADPVANNAWAYATNFVPGK 263
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 42.4 bits (98), Expect = 3e-04 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ADPV N AWAFATNFVPG+ Sbjct: 245 HVADPVANNAWAFATNFVPGQ 265
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 41.2 bits (95), Expect = 7e-04 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HL DPVNN AW++ATNFVP K Sbjct: 247 HLVDPVNNNAWSYATNFVPRK 267
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 40.8 bits (94), Expect = 0.001 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 H+ DPV N AWA+ATNFVPGK Sbjct: 245 HINDPVANNAWAYATNFVPGK 265
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADPVNN AWA+AT PGK Sbjct: 236 HLADPVNNNAWAYATKLCPGK 256
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 40.4 bits (93), Expect = 0.001 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPGK 157 HLADP N AWA+ATNF PGK Sbjct: 245 HLADPAVNNAWAYATNFTPGK 265
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 35.4 bits (80), Expect = 0.041 Identities = 14/20 (70%), Positives = 14/20 (70%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPG 160 HL DPV N AW FAT F PG Sbjct: 248 HLDDPVANNAWVFATKFAPG 267
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 33.9 bits (76), Expect = 0.12 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPG 160 HL +PV N AW +AT FVPG Sbjct: 245 HLDNPVANNAWVYATKFVPG 264
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 32.3 bits (72), Expect = 0.34 Identities = 14/20 (70%), Positives = 15/20 (75%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPG 160 HLADP NKA+A AT F PG Sbjct: 233 HLADPTVNKAFASATKFTPG 252
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 32.0 bits (71), Expect = 0.45 Identities = 13/20 (65%), Positives = 14/20 (70%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVPG 160 HLADPV N AWA+A PG Sbjct: 248 HLADPVANNAWAYAPTSPPG 267
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 29.3 bits (64), Expect = 2.9 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVP 163 HLA+P N A+AFAT F P Sbjct: 233 HLANPTVNNAFAFATKFTP 251
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVP 163 HLA+P N A+A+AT F P Sbjct: 254 HLANPAENNAFAYATKFTP 272
>SIRB2_ECOLI (Q46755) Protein sirB2| Length = 130 Score = 28.5 bits (62), Expect = 5.0 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 140 LDSSVYLPGTKLVAKAHALLLTGSARW 220 +D+ + L G L+AKAH L +G A+W Sbjct: 48 VDTLLLLSGIALMAKAHILPFSGQAQW 74
>CRCB2_NOCFA (Q5YR85) Protein crcB homolog 2| Length = 140 Score = 28.5 bits (62), Expect = 5.0 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = +2 Query: 140 LDSSVYLPGTKLVAKAHALLLTGSARW 220 L++ YL GT L A A +L TG+ARW Sbjct: 107 LEALGYLAGTVLAALAGVVLGTGAARW 133
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 28.1 bits (61), Expect = 6.5 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -2 Query: 219 HLADPVNNKAWAFATNFVP 163 HLADP N A+A AT F P Sbjct: 236 HLADPGTNNAFAAATKFTP 254
>ESAG8_TRYBB (P23799) Putative adenylate cyclase regulatory protein (Leucine| repeat protein) (VSG expression site-associated protein F14.9) Length = 630 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = -1 Query: 112 CMTNIGSLMLYPIKNVYN*GPIWNMK--CLYE 23 C+T + + L+ + N GPIWN++ C+ E Sbjct: 483 CLTGLEEMYLHGCRKCTNFGPIWNLRNVCVLE 514
>VGLG_HRSV3 (P27022) Major surface glycoprotein G (Attachment glycoprotein G)| Length = 297 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = -3 Query: 212 PTPSTTKRGPSPPT 171 PTP TTK+GP P T Sbjct: 206 PTPKTTKKGPKPQT 219 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,526,390 Number of Sequences: 219361 Number of extensions: 619932 Number of successful extensions: 1770 Number of sequences better than 10.0: 66 Number of HSP's better than 10.0 without gapping: 1673 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1770 length of database: 80,573,946 effective HSP length: 48 effective length of database: 70,044,618 effective search space used: 1681070832 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
