ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet10c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YG3P_YEAST (P48239) Hypothetical 41.3 kDa protein in RSR1-CYS4 i... 28 7.0
2MLP31_ARATH (Q941R6) MLP-like protein 31 28 9.2

>YG3P_YEAST (P48239) Hypothetical 41.3 kDa protein in RSR1-CYS4 intergenic|
           region
          Length = 356

 Score = 28.1 bits (61), Expect = 7.0
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 50  ENIRGGFTYLHLHLIKLDW 106
           + IR GF YLHL LI L W
Sbjct: 293 KTIRDGFPYLHLWLINLYW 311



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>MLP31_ARATH (Q941R6) MLP-like protein 31|
          Length = 162

 Score = 27.7 bits (60), Expect = 9.2
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 9  FAGKSHHGTKRNPGKTSAGALH 74
          FAG+ HH +K  PGK     LH
Sbjct: 32 FAGRPHHVSKATPGKIQGCELH 53


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,882,743
Number of Sequences: 219361
Number of extensions: 277458
Number of successful extensions: 586
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 586
length of database: 80,573,946
effective HSP length: 20
effective length of database: 76,186,726
effective search space used: 1828481424
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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