ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet10b11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1NHAC_BACSU (O07553) Na(+)/H(+) antiporter (Sodium/proton antipor... 28 8.8
2ESAG8_TRYBB (P23799) Putative adenylate cyclase regulatory prote... 28 8.8

>NHAC_BACSU (O07553) Na(+)/H(+) antiporter (Sodium/proton antiporter)|
           (Sodium/hydrogen antiporter)
          Length = 453

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 85  TSTIRY*SYIQSTHILMRTLFKCLLAGHKVG 177
           T T+   S+I+ +H+L+  LF C++    VG
Sbjct: 95  TMTVYALSFIEPSHLLLTALFSCMIISTLVG 125



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>ESAG8_TRYBB (P23799) Putative adenylate cyclase regulatory protein (Leucine|
           repeat protein) (VSG expression site-associated protein
           F14.9)
          Length = 630

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -3

Query: 112 CMTNIGSLMLYPIKDVYN*GPIWNMK--CLFE 23
           C+T +  + L+  +   N GPIWN++  C+ E
Sbjct: 483 CLTGLEEMYLHGCRKCTNFGPIWNLRNVCVLE 514


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,941,201
Number of Sequences: 219361
Number of extensions: 405803
Number of successful extensions: 830
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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