ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet10b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlo... 50 0.002
2gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds 46 0.036
3gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding p... 46 0.036
4gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b... 42 0.57
5emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on ch... 42 0.57
6gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, compl... 42 0.57
7gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 42 0.57
8gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protei... 42 0.57
9gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, c... 40 2.2
10gb|AC144861.3| Mus musculus BAC clone RP23-63D4 from chromosome ... 40 2.2
11gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosom... 40 2.2
12gb|BC052945.1| Homo sapiens cDNA clone IMAGE:5268504 40 2.2
13emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chro... 40 2.2
14emb|CR749545.1| Homo sapiens mRNA; cDNA DKFZp686D24206 (from clo... 40 2.2
15emb|CR627300.1| Homo sapiens mRNA; cDNA DKFZp686E24206 (from clo... 40 2.2
16gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chrom... 40 2.2
17ref|XM_940659.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 2.2
18ref|XM_496115.2| PREDICTED: Homo sapiens hypothetical LOC440338 ... 40 2.2
19ref|XM_944925.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 2.2
20ref|XM_932161.1| PREDICTED: Homo sapiens hypothetical protein LO... 40 2.2
21gb|AC092324.3| Homo sapiens chromosome 16 clone RP11-14K2, compl... 40 2.2
22gb|AC139491.2| Homo sapiens chromosome 5 clone RP11-826N14, comp... 40 2.2
23gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H2... 40 2.2
24emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting... 40 2.2
25gb|AF034631.1|AF034631 Panax ginseng chlorophyll a/b binding pro... 40 2.2
26gb|M64619.1|PEACAB66 Pea cab gene, complete cds 40 2.2
27gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major li... 40 2.2
28gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 8.8
29gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome... 38 8.8
30gb|AC110230.12| Mus musculus chromosome 6, clone RP23-54L18, com... 38 8.8
31ref|XM_921450.2| PREDICTED: Mus musculus rearranged L-myc fusion... 38 8.8
32ref|XM_900557.2| PREDICTED: Mus musculus rearranged L-myc fusion... 38 8.8
33emb|Z29560.1|CEK03H1 Caenorhabditis elegans Cosmid K03H1, comple... 38 8.8
34emb|BX296549.11| Zebrafish DNA sequence from clone CH211-264K6 i... 38 8.8
35emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chr... 38 8.8
36gb|AC133207.3| Mus musculus BAC clone RP23-116L23 from chromosom... 38 8.8
37emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, comple... 38 8.8
38emb|Z29561.2|CER10E12 Caenorhabditis elegans Cosmid R10E12, comp... 38 8.8
39emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chr... 38 8.8
40emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chro... 38 8.8
41emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosom... 38 8.8
42emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in ... 38 8.8
43emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in... 38 8.8
44emb|AL591674.3| Zebrafish DNA sequence from clone BUSM1-40G1 in ... 38 8.8
45gb|AC087179.2| Gallus gallus clone WAG-55C14, complete sequence 38 8.8
46gb|AC091725.2| Gallus gallus clone WAG-105M15, complete sequence 38 8.8
47gb|AC087889.15| Mus Musculus Strain C57BL6/J Chromosome 10 BAC, ... 38 8.8
48dbj|AK094972.1| Homo sapiens cDNA FLJ37653 fis, clone BRHIP2010217 38 8.8
49gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Canc... 38 8.8
50gb|AC087891.12| Mus musculus Strain C57BL6/J Chromosome 10 RP23-... 38 8.8
51gb|AC027336.4| Homo sapiens chromosome 5 clone CTD-2215L10, comp... 38 8.8
52gb|AC021088.5| Homo sapiens chromosome 5 clone CTD-2144A5, compl... 38 8.8
53ref|NM_077427.3| Caenorhabditis elegans T21B6.2 (T21B6.2) mRNA, ... 38 8.8
54dbj|AK045021.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 38 8.8
55ref|NM_001027544.1| Caenorhabditis elegans ALIX (Apoptosis-linke... 38 8.8
56ref|NM_001027542.1| Caenorhabditis elegans ALIX (Apoptosis-linke... 38 8.8
57ref|NM_001027543.1| Caenorhabditis elegans ALIX (Apoptosis-linke... 38 8.8
58ref|NM_066812.4| Caenorhabditis elegans ALIX (Apoptosis-linked g... 38 8.8
59gb|AF465753.1| Oncorhynchus mykiss ABCB2 gene, 5' flanking region 38 8.8
60emb|BX255900.5| Zebrafish DNA sequence from clone CH211-261C8 in... 38 8.8
61dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 38 8.8
62emb|BX511127.7| Zebrafish DNA sequence from clone DKEY-203M17 in... 38 8.8
63emb|BX511105.8| Zebrafish DNA sequence from clone DKEY-73J8 in l... 38 8.8
64ref|XM_321513.2| Anopheles gambiae str. PEST ENSANGP00000018135 ... 38 8.8
65gb|AC005070.1|AC005070 Homo sapiens BAC clone CTB-152G17 from 7q... 38 8.8
66emb|AL390334.4|CNS06C7N Human chromosome 14 DNA sequence BAC R-6... 38 8.8
67emb|AL391748.3|CNS06C8H Human chromosome 14 DNA sequence BAC R-6... 38 8.8
68gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z21... 38 8.8
69emb|CR388138.29| Zebrafish DNA sequence from clone DKEY-255D8 in... 38 8.8
70gb|AF093624.1|AF093624 Mus musculus Nsp-like 1 protein (Nspl1) g... 38 8.8
71gb|U73679.1|CEU73679 Caenorhabditis elegans YNK1-a mRNA, complet... 38 8.8
72gb|AC159010.2| Gallus gallus BAC clone CH261-115H16 from chromos... 38 8.8
73emb|AL606927.12| Mouse DNA sequence from clone RP23-144I6 on chr... 38 8.8
74gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, comp... 38 8.8
75emb|AL591596.5| Zebrafish DNA sequence from clone XX-205M23, com... 38 8.8
76emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, comp... 38 8.8
77emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chr... 38 8.8
78emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chr... 38 8.8
79emb|AL672139.6| Zebrafish DNA sequence from clone XX-198H22, com... 38 8.8 
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding
           protein
          Length = 869

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 156 acttgccgggcacaaagttggtggc 180
           |||||||||||||||||||||||||
Sbjct: 808 acttgccgggcacaaagttggtggc 784
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>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds
          Length = 1044

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 154 ttacttgccgggcacaaagttggtggc 180
           ||||||||||||||| |||||||||||
Sbjct: 864 ttacttgccgggcacgaagttggtggc 838
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>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor
           (Wcab) mRNA, complete cds
          Length = 918

 Score = 46.1 bits (23), Expect = 0.036
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 154 ttacttgccgggcacaaagttggtggc 180
           |||||||||||| ||||||||||||||
Sbjct: 810 ttacttgccggggacaaagttggtggc 784
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>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein
           mRNA, partial cds
          Length = 575

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 156 acttgccgggcacaaagttggtggc 180
           |||||||||| ||||||||||||||
Sbjct: 470 acttgccggggacaaagttggtggc 446
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>emb|AL138926.13| Human DNA sequence from clone RP11-173E24 on chromosome 1q31.1-31.3,
              complete sequence
          Length = 169162

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     atgttccatatgggccctcaa 59
              |||||||||||||||||||||
Sbjct: 137529 atgttccatatgggccctcaa 137549
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>gb|AC091947.4| Homo sapiens chromosome 5 clone RP11-367F9, complete sequence
          Length = 170063

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     ctcaattgtaaacatctttga 75
              |||||||||||||||||||||
Sbjct: 100293 ctcaattgtaaacatctttga 100273
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 81    tacaacatcaacgatccgatattag 105
             ||||||||||| |||||||||||||
Sbjct: 68412 tacaacatcaaggatccgatattag 68388
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>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA,
           complete cds
          Length = 1022

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 156 acttgccgggcacaaagttggtggc 180
           |||||||||| ||||||||||||||
Sbjct: 838 acttgccggggacaaagttggtggc 814
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>gb|AC092482.71| Mus musculus strain C57BL/6J clone rp23-60j11, complete sequence
          Length = 220334

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   catacatccagagtacacacatac 130
             ||||||| ||||||||||||||||
Sbjct: 92264 catacatacagagtacacacatac 92287
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>gb|AC144861.3| Mus musculus BAC clone RP23-63D4 from chromosome 18, complete sequence
          Length = 176312

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    actctattcaagtgtttact 158
              ||||||||||||||||||||
Sbjct: 112535 actctattcaagtgtttact 112516
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>gb|AC122816.4| Mus musculus BAC clone RP23-235N10 from chromosome 6, complete sequence
          Length = 177967

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     catgcatttctcaaatagac 33
              ||||||||||||||||||||
Sbjct: 127389 catgcatttctcaaatagac 127370
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>gb|BC052945.1| Homo sapiens cDNA clone IMAGE:5268504
          Length = 3651

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ccctcaattgtaaacatctt 72
            ||||||||||||||||||||
Sbjct: 3435 ccctcaattgtaaacatctt 3416
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>emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chromosome 1 Contains a
             novel gene and part of a novel gene, complete sequence
          Length = 145630

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    aaatagacatttcatgttcc 45
             ||||||||||||||||||||
Sbjct: 17180 aaatagacatttcatgttcc 17199
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>emb|CR749545.1| Homo sapiens mRNA; cDNA DKFZp686D24206 (from clone DKFZp686D24206)
          Length = 3449

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  gaactctattcaagtgttta 156
            ||||||||||||||||||||
Sbjct: 1117 gaactctattcaagtgttta 1136
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>emb|CR627300.1| Homo sapiens mRNA; cDNA DKFZp686E24206 (from clone DKFZp686E24206)
          Length = 3449

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  gaactctattcaagtgttta 156
            ||||||||||||||||||||
Sbjct: 1117 gaactctattcaagtgttta 1136
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>gb|AC183109.2| Pan troglodytes BAC clone CH251-317D18 from chromosome 5, complete
              sequence
          Length = 169688

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     ccctcaattgtaaacatctt 72
              ||||||||||||||||||||
Sbjct: 101948 ccctcaattgtaaacatctt 101929
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>ref|XM_940659.1| PREDICTED: Homo sapiens hypothetical protein LOC651494 (LOC651494),
            mRNA
          Length = 3852

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  gaactctattcaagtgttta 156
            ||||||||||||||||||||
Sbjct: 1599 gaactctattcaagtgttta 1618
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>ref|XM_496115.2| PREDICTED: Homo sapiens hypothetical LOC440338 (LOC440338), mRNA
          Length = 3852

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  gaactctattcaagtgttta 156
            ||||||||||||||||||||
Sbjct: 1599 gaactctattcaagtgttta 1618
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>ref|XM_944925.1| PREDICTED: Homo sapiens hypothetical protein LOC649241, transcript
            variant 1 (LOC649242), mRNA
          Length = 3631

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ccctcaattgtaaacatctt 72
            ||||||||||||||||||||
Sbjct: 3429 ccctcaattgtaaacatctt 3410
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>ref|XM_932161.1| PREDICTED: Homo sapiens hypothetical protein LOC643200, transcript
            variant 1 (LOC643201), mRNA
          Length = 3631

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   ccctcaattgtaaacatctt 72
            ||||||||||||||||||||
Sbjct: 3429 ccctcaattgtaaacatctt 3410
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>gb|AC092324.3| Homo sapiens chromosome 16 clone RP11-14K2, complete sequence
          Length = 160410

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   gaactctattcaagtgttta 156
             ||||||||||||||||||||
Sbjct: 30629 gaactctattcaagtgttta 30610
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>gb|AC139491.2| Homo sapiens chromosome 5 clone RP11-826N14, complete sequence
          Length = 186722

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ccctcaattgtaaacatctt 72
             ||||||||||||||||||||
Sbjct: 21773 ccctcaattgtaaacatctt 21754
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>gb|AC008469.4|AC008469 Homo sapiens chromosome 5 clone CTC-365H24, complete sequence
          Length = 104325

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    ccctcaattgtaaacatctt 72
             ||||||||||||||||||||
Sbjct: 78023 ccctcaattgtaaacatctt 78004
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>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b-
           binding protein ( LHCP )
          Length = 1030

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 153 tttacttgccgggcacaaagttggtggc 180
           ||||||||||||| || |||||||||||
Sbjct: 976 tttacttgccggggacgaagttggtggc 949
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>gb|AF034631.1|AF034631 Panax ginseng chlorophyll a/b binding protein of LHCII type I
           precursor (CAB) mRNA, nuclear gene encoding chloroplast
           protein, complete cds
          Length = 1015

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 153 tttacttgccgggcacaaagttggtggc 180
           ||||||| ||||| ||||||||||||||
Sbjct: 825 tttactttccggggacaaagttggtggc 798
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>gb|M64619.1|PEACAB66 Pea cab gene, complete cds
          Length = 1666

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 149  agtgtttacttgccgggcacaaagttggtggc 180
            |||||||| || ||||| ||||||||||||||
Sbjct: 1524 agtgtttattttccgggaacaaagttggtggc 1493
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>gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major light-harvesting chlorophyll
            a/b-binding protein (polypeptide 15) complex precursor,
            complete coding sequence
          Length = 1993

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 149  agtgtttacttgccgggcacaaagttggtggc 180
            |||||||| || ||||| ||||||||||||||
Sbjct: 1825 agtgtttattttccgggaacaaagttggtggc 1794
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 58     aattgtaaacatctttgat 76
              |||||||||||||||||||
Sbjct: 138542 aattgtaaacatctttgat 138524
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>gb|AC166107.4| Mus musculus BAC clone RP23-205A7 from chromosome 6, complete sequence
          Length = 177843

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     ggaaaatgaaaaccatgca 19
             |||||||||||||||||||
Sbjct: 46912 ggaaaatgaaaaccatgca 46894
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>gb|AC110230.12| Mus musculus chromosome 6, clone RP23-54L18, complete sequence
          Length = 216521

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     tcaaatagacatttcatgt 42
              |||||||||||||||||||
Sbjct: 106189 tcaaatagacatttcatgt 106171
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>ref|XM_921450.2| PREDICTED: Mus musculus rearranged L-myc fusion sequence, transcript
            variant 7 (Rlf), mRNA
          Length = 2752

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   tctcaaatagacatttcat 40
            |||||||||||||||||||
Sbjct: 1595 tctcaaatagacatttcat 1613
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>ref|XM_900557.2| PREDICTED: Mus musculus rearranged L-myc fusion sequence, transcript
            variant 3 (Rlf), mRNA
          Length = 2752

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   tctcaaatagacatttcat 40
            |||||||||||||||||||
Sbjct: 1595 tctcaaatagacatttcat 1613
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>emb|Z29560.1|CEK03H1 Caenorhabditis elegans Cosmid K03H1, complete sequence
          Length = 34583

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 85    acatcaacgatccgatatt 103
             |||||||||||||||||||
Sbjct: 34565 acatcaacgatccgatatt 34547
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>emb|BX296549.11| Zebrafish DNA sequence from clone CH211-264K6 in linkage group 8,
              complete sequence
          Length = 147727

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      gaaaatgaaaaccatgcat 20
              |||||||||||||||||||
Sbjct: 139877 gaaaatgaaaaccatgcat 139895
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>emb|CT025610.7| Mouse DNA sequence from clone RP23-430J15 on chromosome 13, complete
             sequence
          Length = 210718

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    ttctcaaatagacatttca 39
             |||||||||||||||||||
Sbjct: 97356 ttctcaaatagacatttca 97338
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>gb|AC133207.3| Mus musculus BAC clone RP23-116L23 from chromosome 10, complete sequence
          Length = 222101

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 122    cacacatactcatgagaactcta 144
              ||||||||| |||||||||||||
Sbjct: 140228 cacacatacccatgagaactcta 140250
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>emb|Z68011.1|CET21B6 Caenorhabditis elegans Cosmid T21B6, complete sequence
          Length = 30716

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 59    attgtaaacatctttgata 77
             |||||||||||||||||||
Sbjct: 21003 attgtaaacatctttgata 21021
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>emb|Z29561.2|CER10E12 Caenorhabditis elegans Cosmid R10E12, complete sequence
          Length = 30501

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 85   acatcaacgatccgatatt 103
            |||||||||||||||||||
Sbjct: 1048 acatcaacgatccgatatt 1030
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>emb|AL512593.9| Human DNA sequence from clone RP11-508N12 on chromosome 9 Contains two
              novel genes, the gene for a novel zinc finger protein
              (FLJ14960, KIAA1803), a ribosomal protein L7a (RPL7A)
              pseudogene and the 3' end of a novel gene, complete
              sequence
          Length = 148816

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 19     atttctcaaatagacattt 37
              |||||||||||||||||||
Sbjct: 116636 atttctcaaatagacattt 116654
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>emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chromosome 13 Contains part
             of the GPC6 gene for glypican 6 and the 3' end of a novel
             gene, complete sequence
          Length = 150021

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 15    atgcatttctcaaatagacattt 37
             |||||||||| ||||||||||||
Sbjct: 24014 atgcatttctgaaatagacattt 24036
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>emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosome, clone 11N17
          Length = 147295

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    acaacatcaacgatccgat 100
             |||||||||||||||||||
Sbjct: 77330 acaacatcaacgatccgat 77348
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>emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in linkage group 2,
             complete sequence
          Length = 172284

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 66099 aaatgaaaaccatgcattt 66117
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>emb|BX324132.10| Zebrafish DNA sequence from clone DKEY-176G4 in linkage group 8,
             complete sequence
          Length = 266430

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     gaaaatgaaaaccatgcat 20
             |||||||||||||||||||
Sbjct: 13558 gaaaatgaaaaccatgcat 13576
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>emb|AL591674.3| Zebrafish DNA sequence from clone BUSM1-40G1 in linkage group 2
             Contains a novel gene for a protein similar to human
             candidate tumor suppressor p33 ING1 (inhibitor of growth
             1), a putative gene for a novel transcript, 37 TCR-alpha V
             segments (I-1 to I-19, I-22 to I-31, I-33 to I-40) 8 of
             which are pseudogenes,  and a CpG island, complete
             sequence
          Length = 96045

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 62186 aaatgaaaaccatgcattt 62168
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>gb|AC087179.2| Gallus gallus clone WAG-55C14, complete sequence
          Length = 55589

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 16    tgcatttctcaaatagacatttcatgt 42
             ||||||||||||||| |||||| ||||
Sbjct: 17707 tgcatttctcaaatatacattttatgt 17733
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>gb|AC091725.2| Gallus gallus clone WAG-105M15, complete sequence
          Length = 98793

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 16    tgcatttctcaaatagacatttcatgt 42
             ||||||||||||||| |||||| ||||
Sbjct: 79832 tgcatttctcaaatatacatttaatgt 79858
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>gb|AC087889.15| Mus Musculus Strain C57BL6/J Chromosome 10 BAC, RP23-337L15, Complete
              Sequence, complete sequence
          Length = 215756

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 122    cacacatactcatgagaactcta 144
              ||||||||| |||||||||||||
Sbjct: 201336 cacacatacccatgagaactcta 201358
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>dbj|AK094972.1| Homo sapiens cDNA FLJ37653 fis, clone BRHIP2010217
          Length = 2722

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 138 aactctattcaagtgttta 156
           |||||||||||||||||||
Sbjct: 457 aactctattcaagtgttta 475
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>gb|AC073359.12| Homo sapiens 3 BAC RP11-439C8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178336

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    aattgtaaacatctttgat 76
             |||||||||||||||||||
Sbjct: 41589 aattgtaaacatctttgat 41571
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>gb|AC087891.12| Mus musculus Strain C57BL6/J Chromosome 10 RP23-440N1, complete sequence
          Length = 195052

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 122    cacacatactcatgagaactcta 144
              ||||||||| |||||||||||||
Sbjct: 184022 cacacatacccatgagaactcta 184000
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>gb|AC027336.4| Homo sapiens chromosome 5 clone CTD-2215L10, complete sequence
          Length = 94479

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 17    gcatttctcaaatagacatttca 39
             |||||||| ||||||||||||||
Sbjct: 22020 gcatttctaaaatagacatttca 22042
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>gb|AC021088.5| Homo sapiens chromosome 5 clone CTD-2144A5, complete sequence
          Length = 106129

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 17    gcatttctcaaatagacatttca 39
             |||||||| ||||||||||||||
Sbjct: 95490 gcatttctaaaatagacatttca 95512
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>ref|NM_077427.3| Caenorhabditis elegans T21B6.2 (T21B6.2) mRNA, complete cds
          Length = 1273

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 59  attgtaaacatctttgata 77
           |||||||||||||||||||
Sbjct: 582 attgtaaacatctttgata 564
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>dbj|AK045021.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130020A07 product:hypothetical
            protein, full insert sequence
          Length = 2754

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 22   tctcaaatagacatttcat 40
            |||||||||||||||||||
Sbjct: 1597 tctcaaatagacatttcat 1615
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>ref|NM_001027544.1| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 1497

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 400 acatcaacgatccgatatt 382
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>ref|NM_001027542.1| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 2778

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 400 acatcaacgatccgatatt 382
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>ref|NM_001027543.1| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 2698

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 400 acatcaacgatccgatatt 382
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>ref|NM_066812.4| Caenorhabditis elegans ALIX (Apoptosis-linked gene 2 interacting
           protein X) homolog family member (alx-1) (alx-1) mRNA,
           complete cds
          Length = 2758

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 401 acatcaacgatccgatatt 383
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>gb|AF465753.1| Oncorhynchus mykiss ABCB2 gene, 5' flanking region
          Length = 813

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 32  acatttcatgttccatatg 50
           |||||||||||||||||||
Sbjct: 697 acatttcatgttccatatg 715
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>emb|BX255900.5| Zebrafish DNA sequence from clone CH211-261C8 in linkage group 5,
             complete sequence
          Length = 150487

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 6     atgaaaaccatgcatttctcaaa 28
             |||| ||||||||||||||||||
Sbjct: 43661 atgagaaccatgcatttctcaaa 43683
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 149     agtgtttacttgccgggca 167
               |||||||||||||||||||
Sbjct: 2316063 agtgtttacttgccgggca 2316081
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>emb|BX511127.7| Zebrafish DNA sequence from clone DKEY-203M17 in linkage group 1,
             complete sequence
          Length = 97494

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aaaccatgcatttctcaaa 28
             |||||||||||||||||||
Sbjct: 45207 aaaccatgcatttctcaaa 45225
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>emb|BX511105.8| Zebrafish DNA sequence from clone DKEY-73J8 in linkage group 1,
             complete sequence
          Length = 154448

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    aaaccatgcatttctcaaa 28
             |||||||||||||||||||
Sbjct: 69670 aaaccatgcatttctcaaa 69688
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>ref|XM_321513.2| Anopheles gambiae str. PEST ENSANGP00000018135 (ENSANGG00000015646),
            partial mRNA
          Length = 5643

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   acaacatcaacgatccgat 100
            |||||||||||||||||||
Sbjct: 3548 acaacatcaacgatccgat 3566
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>gb|AC005070.1|AC005070 Homo sapiens BAC clone CTB-152G17 from 7q22-q31.1, complete sequence
          Length = 113033

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 9     aaaaccatgcatttctcaaatag 31
             |||||||||||||| ||||||||
Sbjct: 73026 aaaaccatgcatttatcaaatag 73048
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>emb|AL390334.4|CNS06C7N Human chromosome 14 DNA sequence BAC R-664B22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170011

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 126    catactcatgagaactctattca 148
              |||||||||||||||| ||||||
Sbjct: 157297 catactcatgagaactttattca 157319
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>emb|AL391748.3|CNS06C8H Human chromosome 14 DNA sequence BAC R-630G18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170915

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 126    catactcatgagaactctattca 148
              |||||||||||||||| ||||||
Sbjct: 147752 catactcatgagaactttattca 147730
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>gb|AY530951.1| Zea mays putative growth-regulating factor 1 (Z214A02.12), putative 40S
             ribosomal protein S8 (Z214A02.25), and putative casein
             kinase I (Z214A02.27) genes, complete cds
          Length = 158797

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 98    gatattagtcatacatcca 116
             |||||||||||||||||||
Sbjct: 86847 gatattagtcatacatcca 86865
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>emb|CR388138.29| Zebrafish DNA sequence from clone DKEY-255D8 in linkage group 8, complete
              sequence
          Length = 232320

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 2      gaaaatgaaaaccatgcat 20
              |||||||||||||||||||
Sbjct: 138279 gaaaatgaaaaccatgcat 138261



 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     gaaaatgaaaaccatgcat 20
             |||||||||||||||||||
Sbjct: 79001 gaaaatgaaaaccatgcat 78983
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>gb|AF093624.1|AF093624 Mus musculus Nsp-like 1 protein (Nspl1) gene, complete cds; tRNA-Sec
             gene, complete sequence; and FosB protein (Fosb) gene,
             complete cds
          Length = 28825

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 122   cacacatactcatgagaac 140
             |||||||||||||||||||
Sbjct: 15582 cacacatactcatgagaac 15600
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>gb|U73679.1|CEU73679 Caenorhabditis elegans YNK1-a mRNA, complete cds
          Length = 2770

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 85  acatcaacgatccgatatt 103
           |||||||||||||||||||
Sbjct: 412 acatcaacgatccgatatt 394
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>gb|AC159010.2| Gallus gallus BAC clone CH261-115H16 from chromosome unknown, complete
             sequence
          Length = 209348

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 16    tgcatttctcaaatagacatttcatgt 42
             ||||||||||||||| |||||| ||||
Sbjct: 97532 tgcatttctcaaatatacattttatgt 97506
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>emb|AL606927.12| Mouse DNA sequence from clone RP23-144I6 on chromosome 4, complete
             sequence
          Length = 212373

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    tctcaaatagacatttcat 40
             |||||||||||||||||||
Sbjct: 72158 tctcaaatagacatttcat 72140
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>gb|AC093471.8| Mus musculus chromosome 3, clone RP23-29M11, complete sequence
          Length = 193703

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 3      aaaatgaaaaccatgcatttctc 25
              |||||||| ||||||||||||||
Sbjct: 182512 aaaatgaataccatgcatttctc 182534
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>emb|AL591596.5| Zebrafish DNA sequence from clone XX-205M23, complete sequence
          Length = 84809

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 4    aaatgaaaaccatgcattt 22
            |||||||||||||||||||
Sbjct: 2495 aaatgaaaaccatgcattt 2513
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>emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, complete sequence
          Length = 110834

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 28120 aaatgaaaaccatgcattt 28138
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>emb|AL672081.6| Mouse DNA sequence from clone RP23-319D17 on chromosome X, complete
              sequence
          Length = 194141

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     gacatttcatgttccatat 49
              |||||||||||||||||||
Sbjct: 177314 gacatttcatgttccatat 177332
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>emb|AL845462.6| Mouse DNA sequence from clone RP23-236D15 on chromosome 2, complete
             sequence
          Length = 190994

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 98    gatattagtcatacatcca 116
             |||||||||||||||||||
Sbjct: 94364 gatattagtcatacatcca 94346
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>emb|AL672139.6| Zebrafish DNA sequence from clone XX-198H22, complete sequence
          Length = 89160

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 4     aaatgaaaaccatgcattt 22
             |||||||||||||||||||
Sbjct: 74561 aaatgaaaaccatgcattt 74579


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,807,132
Number of Sequences: 3902068
Number of extensions: 1807132
Number of successful extensions: 131187
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130983
Number of HSP's gapped (non-prelim): 204
length of query: 180
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 158
effective length of database: 17,147,199,772
effective search space: 2709257563976
effective search space used: 2709257563976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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