ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet100h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full ... 321 1e-84
2dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
4dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
5dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
6dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for ... 184 2e-43
7dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA... 184 2e-43
8dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 4e-41
9gb|AY109642.1| Zea mays CL1830_1 mRNA sequence 147 4e-32
10dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete... 147 4e-32
11gb|AY105267.1| Zea mays PCO139922 mRNA sequence 107 3e-20
12gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
14dbj|AB232324.1| Arachis hypogaea plda2 gene for phospholipase D ... 46 0.095
15dbj|AB232322.1| Arachis hypogaea plda2 mRNA for phospholipase D ... 46 0.095
16ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D... 44 0.38
17gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence 44 0.38
18gb|AC006663.1| Caenorhabditis elegans fosmid H24K24, complete se... 44 0.38
19gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 m... 44 0.38
20ref|NM_070954.2| Caenorhabditis elegans H24K24.2 (H24K24.2) mRNA... 44 0.38
21gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, com... 44 0.38
22dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.38
23emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkalin... 42 1.5
24gb|AC104094.4| Homo sapiens BAC clone RP11-1383E23 from 7, compl... 42 1.5
25gb|DQ249179.1| Homo sapiens isolate 495CLS7 haplotype HLA-B3801/... 42 1.5
26gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B1402... 42 1.5
27gb|DQ249175.1| Homo sapiens isolate 144CLS7 haplotype HLA-B3801/... 42 1.5
28gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B1402... 42 1.5
29emb|BX247900.8| Human DNA sequence from clone DASS-357P10 on chr... 42 1.5
30emb|AL805909.5| Human DNA sequence from clone DAQB-218D23 on chr... 42 1.5
31emb|AL773544.5| Human DNA sequence from clone DAQB-185I1 on chro... 42 1.5
32gb|AF113918.1|AF113918 Brassica oleracea var. capitata phospholi... 42 1.5
33gb|AC004196.1|AC004196 Homo sapiens clone UWGC:y24c079 from 6p21... 42 1.5
34gb|AF090445.1|AF090445 Brassica oleracea phospholipase D1 (PLD1)... 42 1.5
35emb|AL713981.17| Mouse DNA sequence from clone RP23-173O12 on ch... 42 1.5
36gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosom... 40 5.9
37dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 5.9
38gb|AC092653.3| Homo sapiens BAC clone RP11-434P11 from 2, comple... 40 5.9
39gb|AC136006.5| Homo sapiens BAC clone RP11-588M17 from 2, comple... 40 5.9
40gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome... 40 5.9
41gb|AC012555.27| Homo sapiens 12 RP11-650K20 (Roswell Park Cancer... 40 5.9
42emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in ... 40 5.9
43gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha ... 40 5.9
44gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA g... 40 5.9 
>gb|BT009262.1| Triticum aestivum clone wlk4.pk0022.b7:fis, full insert mRNA sequence
          Length = 2997

 Score =  321 bits (162), Expect = 1e-84
 Identities = 195/206 (94%)
 Strand = Plus / Minus

                                                                        
Query: 232  atctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgg 291
            |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2571 atctatgtggtgaggatggggggaaggtagtccgacttggcgccgaggatgcgggcccgg 2512

                                                                        
Query: 292  gtgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacacca 351
            ||||||||||||||||||||| | |||||||||||||||||||||||| ||||||| || 
Sbjct: 2511 gtgtcggggaagaactccatgcccggcagctccgtcaccacgccgtcgctggcgacgccg 2452

                                                                        
Query: 352  atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataag 411
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 2451 atggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctcgagtatatg 2392

                                      
Query: 412  tcccagtacttgtcggcgatcctgtt 437
            ||||||||||| || |||||||||||
Sbjct: 2391 tcccagtacttctccgcgatcctgtt 2366



 Score =  161 bits (81), Expect = 2e-36
 Identities = 99/105 (94%)
 Strand = Plus / Minus

                                                                        
Query: 84   tagtcactaccgcgtttctcaaccatgcacaccaccgcgcttattaactgtcccacaact 143
            |||||||||||| | |||||||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 2712 tagtcactaccgtggttctcaaccatgcacaccactgcgcttattaacagtcccgcaact 2653

                                                         
Query: 144  ataacaacctgctattttctgaaacacaagttctgaatcaccaaa 188
            |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 ataacagcctgctattttctgaaacacaagttctgaatcaccaaa 2608



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 1    aaacagtaatacaaacatcagaaaccgtgtaaagtatc 38
            ||||||| ||||||||| ||||||||||||||||||||
Sbjct: 2761 aaacagtgatacaaacagcagaaaccgtgtaaagtatc 2724
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>dbj|AK061865.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-H06, full
           insert sequence
          Length = 1084

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Minus

                                                                       
Query: 233 tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
           |||||| |||| |||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 769 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 710

                                                                       
Query: 293 tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
           |||| || ||| |||||||  | |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 709 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 650

                                                                       
Query: 353 tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
           |||||||||| || |||||||| |||||||||||||  ||||||||||||||||| | ||
Sbjct: 649 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 590

                                    
Query: 413 cccagtacttgtcggcgatcctgtt 437
           |||||||||| || |||||||||||
Sbjct: 589 cccagtacttctccgcgatcctgtt 565
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Plus

                                                                           
Query: 233     tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
               |||||| |||| |||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 3723982 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 3724041

                                                                           
Query: 293     tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
               |||| || ||| |||||||  | |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 3724042 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 3724101

                                                                           
Query: 353     tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
               |||||||||| || |||||||| |||||||||||||  ||||||||||||||||| | ||
Sbjct: 3724102 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 3724161

                                        
Query: 413     cccagtacttgtcggcgatcctgtt 437
               |||||||||| || |||||||||||
Sbjct: 3724162 cccagtacttctccgcgatcctgtt 3724186
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0583G08
          Length = 135295

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Plus

                                                                          
Query: 233    tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
              |||||| |||| |||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 132462 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 132521

                                                                          
Query: 293    tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
              |||| || ||| |||||||  | |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 132522 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 132581

                                                                          
Query: 353    tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
              |||||||||| || |||||||| |||||||||||||  ||||||||||||||||| | ||
Sbjct: 132582 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 132641

                                       
Query: 413    cccagtacttgtcggcgatcctgtt 437
              |||||||||| || |||||||||||
Sbjct: 132642 cccagtacttctccgcgatcctgtt 132666
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>dbj|AK065102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N03, full
            insert sequence
          Length = 2851

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Minus

                                                                        
Query: 233  tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
            |||||| |||| |||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2553 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2494

                                                                        
Query: 293  tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
            |||| || ||| |||||||  | |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 2493 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2434

                                                                        
Query: 353  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
            |||||||||| || |||||||| |||||||||||||  ||||||||||||||||| | ||
Sbjct: 2433 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2374

                                     
Query: 413  cccagtacttgtcggcgatcctgtt 437
            |||||||||| || |||||||||||
Sbjct: 2373 cccagtacttctccgcgatcctgtt 2349
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>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D,
            complete cds
          Length = 5871

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Minus

                                                                        
Query: 233  tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
            |||||| |||| |||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 5333 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 5274

                                                                        
Query: 293  tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
            |||| || ||| |||||||  | |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 5273 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 5214

                                                                        
Query: 353  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
            |||||||||| || |||||||| |||||||||||||  ||||||||||||||||| | ||
Sbjct: 5213 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 5154

                                     
Query: 413  cccagtacttgtcggcgatcctgtt 437
            |||||||||| || |||||||||||
Sbjct: 5153 cccagtacttctccgcgatcctgtt 5129
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>dbj|D73411.1|RICPHD2 Oryza sativa (japonica cultivar-group) mRNA for phospholipase D,
            complete cds
          Length = 2990

 Score =  184 bits (93), Expect = 2e-43
 Identities = 177/205 (86%)
 Strand = Plus / Minus

                                                                        
Query: 233  tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
            |||||| |||| |||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2621 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2562

                                                                        
Query: 293  tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
            |||| || ||| |||||||  | |||||||| |||||||| || ||| ||||||| ||||
Sbjct: 2561 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcgacgccaa 2502

                                                                        
Query: 353  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
            |||||||||| || |||||||| |||||||||||||  ||||||||||||||||| | ||
Sbjct: 2501 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2442

                                     
Query: 413  cccagtacttgtcggcgatcctgtt 437
            |||||||||| || |||||||||||
Sbjct: 2441 cccagtacttctccgcgatcctgtt 2417
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>dbj|AK119523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E03, full
            insert sequence
          Length = 2831

 Score =  176 bits (89), Expect = 4e-41
 Identities = 176/205 (85%)
 Strand = Plus / Minus

                                                                        
Query: 233  tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
            |||||| |||| |||||||||| | ||| |||||||||| |||||||| ||||||||| |
Sbjct: 2559 tctatgaggtgaggatggggggcatgtaatccgacttggcgccgaggacgcgggcccgtg 2500

                                                                        
Query: 293  tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
            |||| || ||| |||||||  | |||||||| |||||||| || ||| ||||| | ||||
Sbjct: 2499 tgtcaggaaagtactccatcccgggcagctcagtcaccacaccatcgctggcggcgccaa 2440

                                                                        
Query: 353  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
            |||||||||| || |||||||| |||||||||||||  ||||||||||||||||| | ||
Sbjct: 2439 tggggtagctgaggaggtggccagggaggtcctgctggaggtcgtcgctggagtacatgt 2380

                                     
Query: 413  cccagtacttgtcggcgatcctgtt 437
            |||||||||| || |||||||||||
Sbjct: 2379 cccagtacttctccgcgatcctgtt 2355
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>gb|AY109642.1| Zea mays CL1830_1 mRNA sequence
          Length = 2876

 Score =  147 bits (74), Expect = 4e-32
 Identities = 167/198 (84%)
 Strand = Plus / Minus

                                                                        
Query: 233  tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
            ||||||||||| ||||||| || ||||| ||||||||| | ||||||| |||||| ||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487

                                                                        
Query: 293  tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
            |||||||||||  ||||||  | |||||||| || ||   |||||||   | |||||| |
Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427

                                                                        
Query: 353  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
            | |||||||| || |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgctcgagtacaggt 2367

                              
Query: 413  cccagtacttgtcggcga 430
            |||||||||| |||||||
Sbjct: 2366 cccagtacttctcggcga 2349
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>dbj|D73410.1|MZEPHD1 Zea mays mRNA for phospholipase D, complete cds
          Length = 2793

 Score =  147 bits (74), Expect = 4e-32
 Identities = 167/198 (84%)
 Strand = Plus / Minus

                                                                        
Query: 233  tctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccggg 292
            ||||||||||| ||||||| || ||||| ||||||||| | ||||||| |||||| ||||
Sbjct: 2546 tctatgtggtgaggatgggcgggaggtaatccgacttgttcccgaggacgcgggcgcggg 2487

                                                                        
Query: 293  tgtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaa 352
            |||||||||||  ||||||  | |||||||| || ||   |||||||   | |||||| |
Sbjct: 2486 tgtcggggaagttctccatcccgggcagctcggtaacgctgccgtcggcagtgacaccga 2427

                                                                        
Query: 353  tggggtagctcagcaggtggccggggaggtcctgctccaggtcgtcgctggagtataagt 412
            | |||||||| || |||||||| |||||||||||||||||||||||||| ||||| | ||
Sbjct: 2426 tcgggtagctgaggaggtggcccgggaggtcctgctccaggtcgtcgctcgagtacaggt 2367

                              
Query: 413  cccagtacttgtcggcga 430
            |||||||||| |||||||
Sbjct: 2366 cccagtacttctcggcga 2349
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>gb|AY105267.1| Zea mays PCO139922 mRNA sequence
          Length = 541

 Score =  107 bits (54), Expect = 3e-20
 Identities = 135/162 (83%)
 Strand = Plus / Plus

                                                                       
Query: 234 ctatgtggtggggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggt 293
           |||||||||| ||||||| || ||||| ||||||||| ||||||||| |||||| |||||
Sbjct: 353 ctatgtggtgaggatgggcgggaggtaatccgacttgttgccgaggacgcgggcacgggt 412

                                                                       
Query: 294 gtcggggaagaactccatgtcaggcagctccgtcaccacgccgtcgttggcgacaccaat 353
           ||| ||||||  ||||||  | |||||||| || ||   |||||||   | |||||| ||
Sbjct: 413 gtcagggaagttctccatcccgggcagctcagtaacggtgccgtcggcagtgacaccgat 472

                                                     
Query: 354 ggggtagctcagcaggtggccggggaggtcctgctccaggtc 395
            |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 473 cgggtagctgaggaggtggcccgggaggtcctgctccaggtc 514
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>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10,
             complete sequence
          Length = 156772

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 103/128 (80%)
 Strand = Plus / Plus

                                                                         
Query: 256   aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgtca 315
             |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| | | 
Sbjct: 83490 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 83549

                                                                         
Query: 316   ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 375
             || |||| ||| |    |||||||  |||||| || | ||||||| | ||||||||||||
Sbjct: 83550 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 83609

                     
Query: 376   gggaggtc 383
             ||||||||
Sbjct: 83610 gggaggtc 83617
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 103/128 (80%)
 Strand = Plus / Plus

                                                                           
Query: 256     aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaactccatgtca 315
               |||||||| || |||| ||| ||||| || ||| ||||||| ||||||||||||| | | 
Sbjct: 4197011 aggtagtcggatttggcgccaaggatccgcgcctgggtgtccgggaagaactccacgccg 4197070

                                                                           
Query: 316     ggcagctccgtcaccacgccgtcgttggcgacaccaatggggtagctcagcaggtggccg 375
               || |||| ||| |    |||||||  |||||| || | ||||||| | ||||||||||||
Sbjct: 4197071 gggagctgcgtgatggtgccgtcgccggcgacgccgacggggtaggtgagcaggtggccg 4197130

                       
Query: 376     gggaggtc 383
               ||||||||
Sbjct: 4197131 gggaggtc 4197138
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>dbj|AB232324.1| Arachis hypogaea plda2 gene for phospholipase D alpha 2, complete cds
          Length = 3913

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 349  ccaatggggtagctcagcaggtggccggggaggtc 383
            |||| |||||||| ||| |||||||||||||||||
Sbjct: 3578 ccaacggggtagcgcagaaggtggccggggaggtc 3544
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>dbj|AB232322.1| Arachis hypogaea plda2 mRNA for phospholipase D alpha 2, complete cds
          Length = 2724

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 349  ccaatggggtagctcagcaggtggccggggaggtc 383
            |||| |||||||| ||| |||||||||||||||||
Sbjct: 2363 ccaacggggtagcgcagaaggtggccggggaggtc 2329
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>ref|NM_112443.1| Arabidopsis thaliana PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1);
            phospholipase D AT3G15730 (PLDALPHA1) mRNA, complete cds
          Length = 2795

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 256  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 305
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 2502 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 2453
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>gb|BT014735.1| Arabidopsis thaliana At3g15730.1 mRNA sequence
          Length = 718

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 256 aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 305
           |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 696 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 647
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>gb|AC006663.1| Caenorhabditis elegans fosmid H24K24, complete sequence
          Length = 32209

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 5     agtaatacaaacatcagaaacc 26
             ||||||||||||||||||||||
Sbjct: 22145 agtaatacaaacatcagaaacc 22166
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>gb|AF428278.1|AF428278 Arabidopsis thaliana AT3g15730/MSJ11_13 mRNA, complete cds
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 256  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 305
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 1597 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1548
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>ref|NM_070954.2| Caenorhabditis elegans H24K24.2 (H24K24.2) mRNA, complete cds
          Length = 1473

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 5   agtaatacaaacatcagaaacc 26
           ||||||||||||||||||||||
Sbjct: 469 agtaatacaaacatcagaaacc 490
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>gb|BT003026.1| Arabidopsis thaliana At3g15730/MSJ11_13 gene, complete cds
          Length = 1572

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 256  aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 305
            |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 1550 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 1501
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>dbj|AB017071.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSJ11
          Length = 81370

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 256   aggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaagaa 305
             |||||||| || |||||||||||||| ||||||   ||||| ||||||||
Sbjct: 42804 aggtagtctgatttggtgccgaggatacgggcctttgtgtccgggaagaa 42755
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>emb|X56656.1|LEPHOA L.enzymogenes phoA gene for secreted alkaline phosphatase
          Length = 2292

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 327  caccacgccgtcgttggcgac 347
            |||||||||||||||||||||
Sbjct: 1948 caccacgccgtcgttggcgac 1928
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>gb|AC104094.4| Homo sapiens BAC clone RP11-1383E23 from 7, complete sequence
          Length = 38437

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 303  gaactccatgtcaggcagctc 323
            |||||||||||||||||||||
Sbjct: 4641 gaactccatgtcaggcagctc 4621
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>gb|DQ249179.1| Homo sapiens isolate 495CLS7 haplotype HLA-B3801/HLA-Cw120301 genomic
              sequence
          Length = 338517

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    tgtggtggggatggggggaag 257
              |||||||||||||||||||||
Sbjct: 295919 tgtggtggggatggggggaag 295939
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>gb|DQ249176.1| Homo sapiens isolate 218CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic
              sequence
          Length = 363675

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    tgtggtggggatggggggaag 257
              |||||||||||||||||||||
Sbjct: 311369 tgtggtggggatggggggaag 311389
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>gb|DQ249175.1| Homo sapiens isolate 144CLS7 haplotype HLA-B3801/HLA-Cw120301 genomic
              sequence
          Length = 328871

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    tgtggtggggatggggggaag 257
              |||||||||||||||||||||
Sbjct: 296898 tgtggtggggatggggggaag 296918
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>gb|DQ249173.1| Homo sapiens isolate 135CLS51 haplotype HLA-B140201/HLA-Cw0802 genomic
              sequence
          Length = 336776

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    tgtggtggggatggggggaag 257
              |||||||||||||||||||||
Sbjct: 290464 tgtggtggggatggggggaag 290484
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>emb|BX247900.8| Human DNA sequence from clone DASS-357P10 on chromosome 6, complete
             sequence
          Length = 75621

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   tgtggtggggatggggggaag 257
             |||||||||||||||||||||
Sbjct: 46531 tgtggtggggatggggggaag 46511
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>emb|AL805909.5| Human DNA sequence from clone DAQB-218D23 on chromosome 6 Contains the
             HCG22 gene for HLA complex group 22 and 1 CpG island,
             complete sequence
          Length = 85801

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   tgtggtggggatggggggaag 257
             |||||||||||||||||||||
Sbjct: 85017 tgtggtggggatggggggaag 84997
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>emb|AL773544.5| Human DNA sequence from clone DAQB-185I1 on chromosome 6 Contains the
            C6orf15 gene for chromosome 6 open reading frame 15, the
            CDSN gene for corneodesmosin, the PSORS1C1 gene for
            psoriasis susceptibility 1 candidate 1, the PSORS1C2 gene
            for psoriasis susceptibility 1 candidate 2, the POLR2LP
            pseudogene for polymerase (RNA) II (DNA directed)
            polypeptide L, the C6orf18 gene for chromosome 6 open
            reading frame 18, the TCF19 gene for transcription factor
            19 (SC1), the POU5F1 gene for POU domain, class 5,
            transcription factor 1, the PSORS1C3 gene for psoriasis
            susceptibility 1 candidate 3, and 1 CpG island, complete
            sequence
          Length = 113388

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 237  tgtggtggggatggggggaag 257
            |||||||||||||||||||||
Sbjct: 1216 tgtggtggggatggggggaag 1196
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>gb|AF113918.1|AF113918 Brassica oleracea var. capitata phospholipase D1 (PLD1) gene,
            complete cds
          Length = 3404

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 397  tcgctggagtataagtcccagtacttgtc 425
            ||||| |||||||||||||| ||||||||
Sbjct: 3241 tcgctcgagtataagtcccaatacttgtc 3213
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>gb|AC004196.1|AC004196 Homo sapiens clone UWGC:y24c079 from 6p21, complete sequence
          Length = 41308

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  tgtggtggggatggggggaag 257
            |||||||||||||||||||||
Sbjct: 1292 tgtggtggggatggggggaag 1312
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>gb|AF090445.1|AF090445 Brassica oleracea phospholipase D1 (PLD1) mRNA, complete cds
          Length = 2793

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 397  tcgctggagtataagtcccagtacttgtc 425
            ||||| |||||||||||||| ||||||||
Sbjct: 2353 tcgctcgagtataagtcccaatacttgtc 2325
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>emb|AL713981.17| Mouse DNA sequence from clone RP23-173O12 on chromosome 2, complete
              sequence
          Length = 223609

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 238    gtggtggggatggggggaagg 258
              |||||||||||||||||||||
Sbjct: 185256 gtggtggggatggggggaagg 185276
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>gb|AC132454.3| Mus musculus BAC clone RP23-127P22 from chromosome 19, complete sequence
          Length = 225152

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 159    tttctgaaacacaagttctg 178
              ||||||||||||||||||||
Sbjct: 136964 tttctgaaacacaagttctg 136945
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 30      taaagtatccaagtctcatattac 53
               |||| |||||||||||||||||||
Sbjct: 2285010 taaactatccaagtctcatattac 2284987
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>gb|AC092653.3| Homo sapiens BAC clone RP11-434P11 from 2, complete sequence
          Length = 213073

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   tctatgtggtggggatgggg 252
             ||||||||||||||||||||
Sbjct: 94319 tctatgtggtggggatgggg 94338
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>gb|AC136006.5| Homo sapiens BAC clone RP11-588M17 from 2, complete sequence
          Length = 161027

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   tctatgtggtggggatgggg 252
             ||||||||||||||||||||
Sbjct: 23317 tctatgtggtggggatgggg 23336
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>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence
          Length = 224908

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    gtggggatggggggaaggta 260
              ||||||||||||||||||||
Sbjct: 118092 gtggggatggggggaaggta 118073
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>gb|AC012555.27| Homo sapiens 12 RP11-650K20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 95597

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   ggtggggatggggggaaggt 259
             ||||||||||||||||||||
Sbjct: 19371 ggtggggatggggggaaggt 19352
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>emb|BX908754.8| Zebrafish DNA sequence from clone DKEY-196D8 in linkage group 18,
             complete sequence
          Length = 94961

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   ctataacaacctgctattttctga 165
             |||||||| |||||||||||||||
Sbjct: 39144 ctataacaccctgctattttctga 39167
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>gb|DQ267933.1| Cucumis melo var. inodorus phospholipase D-alpha (PLDa1) mRNA,
            complete cds
          Length = 2877

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 245  ggatggggggaaggtagtccgacttggtgccgaggatgcgggcccgggtgtcggggaaga 304
            ||||||| || |||||||| || ||||| ||||| || || ||   ||||||||||||||
Sbjct: 2523 ggatgggagggaggtagtcggatttggtaccgagtatacgagctttggtgtcggggaaga 2464

                
Query: 305  actc 308
            ||||
Sbjct: 2463 actc 2460
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>gb|AY294150.1| Platyamoeba placida small subunit ribosomal RNA gene, partial
           sequence
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 177 tgaatcaccaaaggaaccac 196
           ||||||||||||||||||||
Sbjct: 238 tgaatcaccaaaggaaccac 219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,182,514
Number of Sequences: 3902068
Number of extensions: 3182514
Number of successful extensions: 72084
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71979
Number of HSP's gapped (non-prelim): 104
length of query: 437
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 415
effective length of database: 17,147,199,772
effective search space: 7116087905380
effective search space used: 7116087905380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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