ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet100h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transfe... 799 0.0
2dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase,... 311 1e-81
3gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome... 192 6e-46
4gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 192 6e-46
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 192 6e-46
6dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 6e-46
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 192 6e-46
8dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
9gb|AY104207.1| Zea mays PCO111099 mRNA sequence 111 2e-21
10gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan ... 56 9e-05
11gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransg... 54 4e-04
12gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase... 46 0.091
13ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TR... 44 0.36
14emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Co... 44 0.36
15emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Co... 44 0.36
16gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 fro... 44 0.36
17dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan tra... 44 0.36
18dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.36
19gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan trans... 44 0.36
20dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan endot... 44 0.36
21dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transf... 44 0.36
22dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferas... 44 0.36
23dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxylogl... 44 0.36
24gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hyd... 42 1.4
25gb|AE001416.2| Plasmodium falciparum 3D7 chromosome 2 section 53... 42 1.4
26emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 42 1.4
27gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.4
28gb|AC093368.4| Homo sapiens chromosome 8, clone RP11-783P22, com... 42 1.4
29gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, comp... 42 1.4
30dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan en... 42 1.4
31dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan endot... 42 1.4
32gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase... 42 1.4
33ref|XM_527961.1| PREDICTED: Pan troglodytes similar to Sonic hed... 40 5.6
34ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.6
35gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosom... 40 5.6
36gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete... 40 5.6
37gb|AY422195.1| Homo sapiens sonic hedgehog homolog (Drosophila) ... 40 5.6
38emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotrans... 40 5.6
39dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 40 5.6
40dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 5.6
41gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold 40 5.6
42gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome... 40 5.6
43gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosom... 40 5.6
44dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endot... 40 5.6
45gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.6
46gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete... 40 5.6
47gb|AC002484.1|AC002484 Human cosmid clone LL157A05 from 7q36, co... 40 5.6 
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase
          Length = 1175

 Score =  799 bits (403), Expect = 0.0
 Identities = 409/411 (99%)
 Strand = Plus / Minus

                                                                        
Query: 10   gagcgaatatgattattattatagcatacttagttggatcatgcgtgagcaatcagaaga 69
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 gagcgaatatgattattattatagcatacttagttggatcatgcgtgagcaatcagaaga 1116

                                                                        
Query: 70   ataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtactagtaca 129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 ataataaagcacgcatgagcatacagacacgtagggatacaaattcctcgtactagtaca 1056

                                                                        
Query: 130  tctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggtccttta 189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1055 tctcatcgaccgcaccgcgaccggtggtacaacaacaactactgtagtagcggtccttta 996

                                                                        
Query: 190  catcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgcactcag 249
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 995  catcagtagtagtaagtaaagtatatcacgctcagacgtcgcggtcgcgtttgcactcgg 936

                                                                        
Query: 250  gcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgctccttcc 309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935  gcgacatggcggcgtatcgttcgcggtctgtgcagtagttgtagatggtgtgctccttcc 876

                                                                        
Query: 310  tgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggctgatctc 369
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 875  tgacccaggcgaggcggcggtactgcgcggcgtccaggtcctggaactcgggctgatccc 816

                                                               
Query: 370  accagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgc 420
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815  accagcgggcgccctgggtggcgcacaacttggcctccgccgacgcctcgc 765
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>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds
          Length = 1088

 Score =  311 bits (157), Expect = 1e-81
 Identities = 190/201 (94%)
 Strand = Plus / Minus

                                                                       
Query: 220 ctcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcgtatcgttcgcggtctg 279
           ||||||||||||||||||| |||||||| |||| |||||||||||| || ||| |||| |
Sbjct: 926 ctcagacgtcgcggtcgcgcttgcactctggcgccatggcggcgtagcggtcgtggtcgg 867

                                                                       
Query: 280 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 807

                                                                       
Query: 340 cgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgcacaact 399
           ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct: 806 cgtccaggtcctggaactcgggctggtcccaccagcgggcgccctgggtggcgcagaact 747

                                
Query: 400 tggcctccgccgacgcctcgc 420
           |||||||||| ||||||||||
Sbjct: 746 tggcctccgcggacgcctcgc 726



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                        
Query: 100  gtagggatacaaattcctcgtactagtacatctcatcgaccgcaccgcgaccggtggtac 159
            ||||||||||||||||||||||||| ||  ||||| |||||||||||||||| | || ||
Sbjct: 1039 gtagggatacaaattcctcgtactactaggtctcagcgaccgcaccgcgaccagcggcac 980

                       
Query: 160  aacaacaacta 170
            |||||||||||
Sbjct: 979  aacaacaacta 969
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>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17,
              complete sequence
          Length = 148829

 Score =  192 bits (97), Expect = 6e-46
 Identities = 175/201 (87%)
 Strand = Plus / Minus

                                                                          
Query: 220    ctcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcgtatcgttcgcggtctg 279
              ||||| ||||||||||||| | |||||| ||||||||||||| ||| |||||||||||  
Sbjct: 115781 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 115722

                                                                          
Query: 280    tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 339
               ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 115721 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 115662

                                                                          
Query: 340    cgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgcacaact 399
              |||| |||||  ||||||| ||||| || ||||| ||||||||||||||||||||  || 
Sbjct: 115661 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 115602

                                   
Query: 400    tggcctccgccgacgcctcgc 420
               ||||||||||||||||||||
Sbjct: 115601 gggcctccgccgacgcctcgc 115581
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>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score =  192 bits (97), Expect = 6e-46
 Identities = 175/201 (87%)
 Strand = Plus / Minus

                                                                         
Query: 220   ctcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcgtatcgttcgcggtctg 279
             ||||| ||||||||||||| | |||||| ||||||||||||| ||| |||||||||||  
Sbjct: 15400 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 15341

                                                                         
Query: 280   tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 339
              ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 15340 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 15281

                                                                         
Query: 340   cgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgcacaact 399
             |||| |||||  ||||||| ||||| || ||||| ||||||||||||||||||||  || 
Sbjct: 15280 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 15221

                                  
Query: 400   tggcctccgccgacgcctcgc 420
              ||||||||||||||||||||
Sbjct: 15220 gggcctccgccgacgcctcgc 15200
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  192 bits (97), Expect = 6e-46
 Identities = 175/201 (87%)
 Strand = Plus / Minus

                                                                            
Query: 220      ctcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcgtatcgttcgcggtctg 279
                ||||| ||||||||||||| | |||||| ||||||||||||| ||| |||||||||||  
Sbjct: 19012583 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19012524

                                                                            
Query: 280      tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 339
                 ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 19012523 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19012464

                                                                            
Query: 340      cgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgcacaact 399
                |||| |||||  ||||||| ||||| || ||||| ||||||||||||||||||||  || 
Sbjct: 19012463 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 19012404

                                     
Query: 400      tggcctccgccgacgcctcgc 420
                 ||||||||||||||||||||
Sbjct: 19012403 gggcctccgccgacgcctcgc 19012383
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>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full
           insert sequence
          Length = 977

 Score =  192 bits (97), Expect = 6e-46
 Identities = 175/201 (87%)
 Strand = Plus / Minus

                                                                       
Query: 220 ctcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcgtatcgttcgcggtctg 279
           ||||| ||||||||||||| | |||||| ||||||||||||| ||| |||||||||||  
Sbjct: 916 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 857

                                                                       
Query: 280 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 339
            ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 856 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 797

                                                                       
Query: 340 cgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgcacaact 399
           |||| |||||  ||||||| ||||| || ||||| ||||||||||||||||||||  || 
Sbjct: 796 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 737

                                
Query: 400 tggcctccgccgacgcctcgc 420
            ||||||||||||||||||||
Sbjct: 736 gggcctccgccgacgcctcgc 716
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  192 bits (97), Expect = 6e-46
 Identities = 175/201 (87%)
 Strand = Plus / Minus

                                                                            
Query: 220      ctcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcgtatcgttcgcggtctg 279
                ||||| ||||||||||||| | |||||| ||||||||||||| ||| |||||||||||  
Sbjct: 19171232 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 19171173

                                                                            
Query: 280      tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 339
                 ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 19171172 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 19171113

                                                                            
Query: 340      cgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgcacaact 399
                |||| |||||  ||||||| ||||| || ||||| ||||||||||||||||||||  || 
Sbjct: 19171112 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 19171053

                                     
Query: 400      tggcctccgccgacgcctcgc 420
                 ||||||||||||||||||||
Sbjct: 19171052 gggcctccgccgacgcctcgc 19171032
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>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full
           insert sequence
          Length = 1053

 Score =  184 bits (93), Expect = 2e-43
 Identities = 174/201 (86%)
 Strand = Plus / Minus

                                                                       
Query: 220 ctcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcgtatcgttcgcggtctg 279
           ||||| ||||||||||||| | |||||| ||||||||||||| ||| |||||||||||  
Sbjct: 913 ctcaggcgtcgcggtcgcggtggcactcgggcgacatggcggggtagcgttcgcggtcgt 854

                                                                       
Query: 280 tgcagtagttgtagatggtgtgctccttcctgacccaggcgaggcggcggtactgcgcgg 339
            ||||||||||||||||||||||  ||| | ||||||||||||||||||||||||  |||
Sbjct: 853 cgcagtagttgtagatggtgtgcgtcttgcggacccaggcgaggcggcggtactggtcgg 794

                                                                       
Query: 340 cgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgcacaact 399
           |||| |||||  ||||||| ||||| || ||||| ||||||||||||||||||||  || 
Sbjct: 793 cgtcgaggtcgcggaactccggctggtcccaccaccgggcgccctgggtggcgcagtacc 734

                                
Query: 400 tggcctccgccgacgcctcgc 420
            | ||||||||||||||||||
Sbjct: 733 ggtcctccgccgacgcctcgc 713
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>gb|AY104207.1| Zea mays PCO111099 mRNA sequence
          Length = 1202

 Score =  111 bits (56), Expect = 2e-21
 Identities = 150/178 (84%), Gaps = 5/178 (2%)
 Strand = Plus / Minus

                                                                       
Query: 221 tcagacgtcgcggtcgcgtttgcactcaggcgacatggcggcg---tatcgttcgcggtc 277
           ||||||||||||||||||   |||||| |||| || |||||||   || || ||||| ||
Sbjct: 941 tcagacgtcgcggtcgcgggcgcactcgggcggcacggcggcgccgtagcggtcgcgatc 882

                                                                       
Query: 278 tgtgcagtagttgtagatggtgt-gctccttcctgacccaggcgaggcggcggtactgcg 336
            |||||||||||||||||||||| ||  |  |||||||  ||| ||||||||||||||||
Sbjct: 881 ggtgcagtagttgtagatggtgtagcggcg-cctgacctcggccaggcggcggtactgcg 823

                                                                     
Query: 337 cggcgtccaggtcctggaactcgggctgatctcaccagcgggcgccctgggtggcgca 394
           ||||||| ||||||  |||||| ||||| || |||||||| |||||||||||||||||
Sbjct: 822 cggcgtcgaggtccctgaactccggctggtcccaccagcgcgcgccctgggtggcgca 765
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>gb|L46792.1|ACTXET Actinidia deliciosa clone AdXET-5 xyloglucan endotransglycosylase
           precursor (XET) mRNA, complete cds
          Length = 1178

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 381 ccctgggtggcgcacaacttggcctccgccgacgcctcgc 420
           |||||||||||||| |||||||||||| | ||||||||||
Sbjct: 753 ccctgggtggcgcagaacttggcctccacagacgcctcgc 714



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 gtgcagtagttgtagatggt 298
           ||||||||||||||||||||
Sbjct: 855 gtgcagtagttgtagatggt 836
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>gb|AF052194.1|AF052194 Actinidia deliciosa xyloglucan endotransglycosylase precursor (XET)
           mRNA, partial cds
          Length = 789

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 362 ctgatctcaccagcgggcgccctgggtggcgcacaacttggcctccgccga 412
           |||||| ||||||||   ||||||||||||||| |||||||||||| ||||
Sbjct: 720 ctgatcccaccagcgcttgccctgggtggcgcagaacttggcctccaccga 670
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>gb|AY144593.1| Malus x domestica xyloglucan endotransglycosylase (XET01) mRNA,
           complete cds
          Length = 1268

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 273 cggtctgtgcagtagttgtagatggtg 299
           ||||| |||||||||||||||||||||
Sbjct: 890 cggtcagtgcagtagttgtagatggtg 864
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>ref|NM_121390.3| Arabidopsis thaliana EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4);
            hydrolase, acting on glycosyl bonds / hydrolase,
            hydrolyzing O-glycosyl compounds AT5G13870 (EXGT-A4)
            mRNA, complete cds
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 271  cgcggtctgtgcagtagttgtagatggtgt 300
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
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>emb|BX830569.1|CNS0A1EU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB90ZE02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 271  cgcggtctgtgcagtagttgtagatggtgt 300
            ||||||| ||||| ||||||||||||||||
Sbjct: 1229 cgcggtcagtgcaatagttgtagatggtgt 1200
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>emb|BX831074.1|CNS0A0QQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS55ZF02 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1362

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 271  cgcggtctgtgcagtagttgtagatggtgt 300
            ||||||| ||||| ||||||||||||||||
Sbjct: 1220 cgcggtcagtgcaatagttgtagatggtgt 1191
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>gb|AC152829.2| Ornithorhynchus anatinus BAC clone OABb-466A1 from chromosome unknown,
             complete sequence
          Length = 160523

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 18    atgattattattatagcatact 39
             ||||||||||||||||||||||
Sbjct: 33686 atgattattattatagcatact 33665
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>dbj|AK176228.1| Arabidopsis thaliana mRNA for endoxyloglucan transferase, complete
           cds, clone: RAFL23-11-K19
          Length = 1028

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 271 cgcggtctgtgcagtagttgtagatggtgt 300
           ||||||| ||||| ||||||||||||||||
Sbjct: 852 cgcggtcagtgcaatagttgtagatggtgt 823
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>dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC12
          Length = 74613

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 271   cgcggtctgtgcagtagttgtagatggtgt 300
             ||||||| ||||| ||||||||||||||||
Sbjct: 25611 cgcggtcagtgcaatagttgtagatggtgt 25640
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>gb|AF163822.1|AF163822 Arabidopsis thaliana endoxyloglucan transferase (EXGT-A4) gene,
            complete cds
          Length = 2645

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 271  cgcggtctgtgcagtagttgtagatggtgt 300
            ||||||| ||||| ||||||||||||||||
Sbjct: 2377 cgcggtcagtgcaatagttgtagatggtgt 2348
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>dbj|AB086395.1| Vigna angularis VaXTH1 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1913

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 279  gtgcagtagttgtagatggtgt 300
            ||||||||||||||||||||||
Sbjct: 1607 gtgcagtagttgtagatggtgt 1586
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>dbj|D16458.1|VIREXT5 V.angularis mRNA for endo-xyloglucan transferase, complete cds
          Length = 1319

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 279 gtgcagtagttgtagatggtgt 300
           ||||||||||||||||||||||
Sbjct: 996 gtgcagtagttgtagatggtgt 975
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>dbj|D16455.1|SOYEXT2 Soybean mRNA for endo-xyloglucan transferase, partial cds
          Length = 975

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 279 gtgcagtagttgtagatggtgt 300
           ||||||||||||||||||||||
Sbjct: 829 gtgcagtagttgtagatggtgt 808
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>dbj|AB026486.1| Arabidopsis thaliana EXGT-A4 mRNA for endoxyloglucan transferase,
           complete cds
          Length = 1050

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 271 cgcggtctgtgcagtagttgtagatggtgt 300
           ||||||| ||||| ||||||||||||||||
Sbjct: 872 cgcggtcagtgcaatagttgtagatggtgt 843
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>gb|AY841854.1| Vigna radiata xyloglucan endotransglucosylase/hydrolase precursor
           (XTH1) mRNA, complete cds
          Length = 1112

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 279 gtgcagtagttgtagatggtg 299
           |||||||||||||||||||||
Sbjct: 809 gtgcagtagttgtagatggtg 789
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>gb|AE001416.2| Plasmodium falciparum 3D7 chromosome 2 section 53 of 73 of the
            complete sequence
          Length = 17429

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 15   aatatgattattattatagca 35
            |||||||||||||||||||||
Sbjct: 2013 aatatgattattattatagca 2033
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 373    agcgggcgccctgggtggcgc 393
              |||||||||||||||||||||
Sbjct: 311269 agcgggcgccctgggtggcgc 311249
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 326     gcggtactgcgcggcgtccaggtcc 350
               ||||| |||||||||||||||||||
Sbjct: 2666683 gcggttctgcgcggcgtccaggtcc 2666707
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>gb|AC093368.4| Homo sapiens chromosome 8, clone RP11-783P22, complete sequence
          Length = 158535

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 56    gagcaatcagaagaataataa 76
             |||||||||||||||||||||
Sbjct: 24758 gagcaatcagaagaataataa 24738
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>gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, complete sequence
          Length = 174399

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 56    gagcaatcagaagaataataa 76
             |||||||||||||||||||||
Sbjct: 43813 gagcaatcagaagaataataa 43833
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>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1181

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 275  gtctgtgcagtagttgtagat 295
            |||||||||||||||||||||
Sbjct: 1065 gtctgtgcagtagttgtagat 1045
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>dbj|AB086396.1| Vigna angularis VaXTH2 gene for xyloglucan
            endotransglucosylase/hydrolase, complete cds
          Length = 1712

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  gtgcagtagttgtagatggtg 299
            |||||||||||||||||||||
Sbjct: 1446 gtgcagtagttgtagatggtg 1426
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>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA,
           complete cds
          Length = 1130

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 279 gtgcagtagttgtagatggtg 299
           |||||||||||||||||||||
Sbjct: 868 gtgcagtagttgtagatggtg 848
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>ref|XM_527961.1| PREDICTED: Pan troglodytes similar to Sonic hedgehog protein
            precursor (SHH) (LOC472586), mRNA
          Length = 3822

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 394  acaacttggcctccgccgac 413
            ||||||||||||||||||||
Sbjct: 1322 acaacttggcctccgccgac 1341
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>ref|XM_362730.1| Magnaporthe grisea 70-15 hypothetical protein (MG08318.4) partial
           mRNA
          Length = 816

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 329 gtactgcgcggcgtccaggtcctggaactcgg 360
           |||| |||| |||||||||||| |||||||||
Sbjct: 366 gtacagcgccgcgtccaggtccaggaactcgg 335
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>gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosome 5, complete
            sequence
          Length = 194560

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   cacgcatgagcatacagaca 98
            ||||||||||||||||||||
Sbjct: 9765 cacgcatgagcatacagaca 9784
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>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence
          Length = 154737

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 394    acaacttggcctccgccgac 413
              ||||||||||||||||||||
Sbjct: 100604 acaacttggcctccgccgac 100585
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>gb|AY422195.1| Homo sapiens sonic hedgehog homolog (Drosophila) (SHH) gene, complete
            cds
          Length = 13414

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 394  acaacttggcctccgccgac 413
            ||||||||||||||||||||
Sbjct: 5477 acaacttggcctccgccgac 5496
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>emb|AJ811689.1| Pyrus communis xet gene for xyloglucan endotransglycosilase, exon 1
          Length = 1007

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgcagtagttgtagatggtg 299
           ||||||||||||||||||||
Sbjct: 925 tgcagtagttgtagatggtg 906
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>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 47      atcatgcgtgagcaatcaga 66
               ||||||||||||||||||||
Sbjct: 1688270 atcatgcgtgagcaatcaga 1688251
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>dbj|AK140479.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:B930008M23 product:Similar to
           dynein heavy chain at 16F homolog [Homo sapiens], full
           insert sequence
          Length = 4389

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 tgtgctccttcctgacccag 317
           ||||||||||||||||||||
Sbjct: 90  tgtgctccttcctgacccag 71
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>gb|DP000051.1| Carollia perspicillata target 126 genomic scaffold
          Length = 501879

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     tacagacacgtagggataca 110
              ||||||||||||||||||||
Sbjct: 498467 tacagacacgtagggataca 498448
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>gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome 5, complete sequence
          Length = 222180

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    cacgcatgagcatacagaca 98
             ||||||||||||||||||||
Sbjct: 82293 cacgcatgagcatacagaca 82274
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>gb|AC147335.2| Pan troglodytes BAC clone RP43-4C1 from chromosome 7, complete sequence
          Length = 186272

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 394   acaacttggcctccgccgac 413
             ||||||||||||||||||||
Sbjct: 22172 acaacttggcctccgccgac 22191
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>dbj|AB095368.1| Pyrus communis PC-XET1 mRNA for xyloglucan endotransglycosylase,
           partial cds
          Length = 1292

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 280 tgcagtagttgtagatggtg 299
           ||||||||||||||||||||
Sbjct: 949 tgcagtagttgtagatggtg 930
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 334     gcgcggcgtccaggtcctgg 353
               ||||||||||||||||||||
Sbjct: 4628592 gcgcggcgtccaggtcctgg 4628573
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>gb|AC122201.4| Mus musculus BAC clone RP23-64I9 from 6, complete sequence
          Length = 239994

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 298    tgtgctccttcctgacccag 317
              ||||||||||||||||||||
Sbjct: 195584 tgtgctccttcctgacccag 195565
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>gb|AC002484.1|AC002484 Human cosmid clone LL157A05 from 7q36, complete sequence
          Length = 48469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   acaacttggcctccgccgac 413
             ||||||||||||||||||||
Sbjct: 14988 acaacttggcctccgccgac 14969


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,682,501
Number of Sequences: 3902068
Number of extensions: 4682501
Number of successful extensions: 64708
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64502
Number of HSP's gapped (non-prelim): 204
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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