ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet100g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX mono... 724 0.0
2ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa855... 220 3e-54
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
4dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
5dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D... 220 3e-54
6dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
7dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
8dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
9dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
10gb|AY108897.1| Zea mays PCO080076 mRNA sequence 174 2e-40
11gb|BT013953.1| Lycopersicon esculentum clone 132976F, mRNA sequence 72 2e-09
12gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds 66 1e-07
13gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds 64 4e-07
14ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA... 62 2e-06
15ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRO... 62 2e-06
16emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BA... 62 2e-06
17emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BA... 62 2e-06
18gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiro... 62 2e-06
19gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds 62 2e-06
20gb|AY322556.1| Brassica napus putative fatty acid desaturase BNZ... 58 3e-05
21gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing... 58 3e-05
22gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete se... 56 1e-04
23gb|AY322555.1| Rosa davurica putative fatty acid desaturase RDZI... 52 0.002
24gb|AY322554.1| Salix babylonica putative fatty acid desaturase S... 52 0.002
25gb|AY322553.1| Spinacia oleracea putative fatty acid desaturase ... 52 0.002
26gb|AY322552.1| Triticum aestivum putative fatty acid desaturase ... 52 0.002
27gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, com... 46 0.10
28gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, com... 46 0.10
29gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, com... 42 1.6
30gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, com... 42 1.6
31gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromo... 42 1.6
32gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chrom... 42 1.6
33gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, comple... 42 1.6
34gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete se... 42 1.6
35dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.6
36gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 42 1.6
37gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, co... 40 6.2
38gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, com... 40 6.2
39gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, c... 40 6.2
40ref|XM_549074.2| PREDICTED: Canis familiaris hypothetical LOC491... 40 6.2
41gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 40 6.2
42ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 6.2
43emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M... 40 6.2
44emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20... 40 6.2
45gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, comp... 40 6.2
46gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome... 40 6.2
47gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome... 40 6.2
48gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306... 40 6.2
49dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
50dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 6.2
51emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, ... 40 6.2
52dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 6.2
53gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome... 40 6.2 
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester cyclase
            (Xantha-l) gene, complete cds
          Length = 2097

 Score =  724 bits (365), Expect = 0.0
 Identities = 365/365 (100%)
 Strand = Plus / Minus

                                                                        
Query: 99   caggtgagcacaggaagatgtagatcatgttaattaaccatggaccctgtgctcatttag 158
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2097 caggtgagcacaggaagatgtagatcatgttaattaaccatggaccctgtgctcatttag 2038

                                                                        
Query: 159  agactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcctt 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 agactctcgaggagcatgatgcatcattatgtttgtaaagataggcagagatgaatcctt 1978

                                                                        
Query: 219  tttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagac 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1977 tttcgacaaattcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagac 1918

                                                                        
Query: 279  tcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagga 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1917 tcgattgggggcatgaggtacgcagcgatgatctcagacactagttgggcaataagagga 1858

                                                                        
Query: 339  accctcttcaggttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttc 398
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 accctcttcaggttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttc 1798

                                                                        
Query: 399  aggttgatatctaccatcctgtctaacttcctcttgaattcagggttctcaacatccggt 458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1797 aggttgatatctaccatcctgtctaacttcctcttgaattcagggttctcaacatccggt 1738

                 
Query: 459  acagc 463
            |||||
Sbjct: 1737 acagc 1733
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>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA
          Length = 1227

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1227 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1168

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1167 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1108

                                                                        
Query: 350  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1107 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1048

                                                   
Query: 410  taccatcctgtctaacttcctcttgaattcagggttctc 448
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 caccatcctgtctaacttcctcttgaattcagggttctc 1009
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                           
Query: 230     tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
               |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 9875240 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 9875181

                                                                           
Query: 290     catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
               ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 9875180 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 9875121

                                                                           
Query: 350     gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
               ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 9875120 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 9875061

                                                      
Query: 410     taccatcctgtctaacttcctcttgaattcagggttctc 448
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 9875060 caccatcctgtctaacttcctcttgaattcagggttctc 9875022



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 52      tgatgcagttcactgccactta 73
               ||||||||||||||||||||||
Sbjct: 9875448 tgatgcagttcactgccactta 9875427
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                          
Query: 230    tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
              |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 139490 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 139431

                                                                          
Query: 290    catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
              ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 139430 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 139371

                                                                          
Query: 350    gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
              ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 139370 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 139311

                                                     
Query: 410    taccatcctgtctaacttcctcttgaattcagggttctc 448
               ||||||||||||||||||||||||||||||||||||||
Sbjct: 139310 caccatcctgtctaacttcctcttgaattcagggttctc 139272



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 52     tgatgcagttcactgccactta 73
              ||||||||||||||||||||||
Sbjct: 139698 tgatgcagttcactgccactta 139677
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>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0003H10
          Length = 142418

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                         
Query: 230   tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
             |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 11006 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 10947

                                                                         
Query: 290   catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
             ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 10946 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 10887

                                                                         
Query: 350   gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
             ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 10886 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 10827

                                                    
Query: 410   taccatcctgtctaacttcctcttgaattcagggttctc 448
              ||||||||||||||||||||||||||||||||||||||
Sbjct: 10826 caccatcctgtctaacttcctcttgaattcagggttctc 10788



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 52    tgatgcagttcactgccactta 73
             ||||||||||||||||||||||
Sbjct: 11214 tgatgcagttcactgccactta 11193
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>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full
            insert sequence
          Length = 1691

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1275 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1216

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1215 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1156

                                                                        
Query: 350  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1155 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1096

                                                   
Query: 410  taccatcctgtctaacttcctcttgaattcagggttctc 448
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 caccatcctgtctaacttcctcttgaattcagggttctc 1057



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 52   tgatgcagttcactgccactta 73
            ||||||||||||||||||||||
Sbjct: 1483 tgatgcagttcactgccactta 1462
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>dbj|AK061646.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B09, full
           insert sequence
          Length = 618

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                       
Query: 230 tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
           |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 350 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 291

                                                                       
Query: 290 catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
           ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 290 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 231

                                                                       
Query: 350 gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
           ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 230 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 171

                                                  
Query: 410 taccatcctgtctaacttcctcttgaattcagggttctc 448
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 170 caccatcctgtctaacttcctcttgaattcagggttctc 132



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 52  tgatgcagttcactgccactta 73
           ||||||||||||||||||||||
Sbjct: 558 tgatgcagttcactgccactta 537
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>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full
            insert sequence
          Length = 1944

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1265 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1206

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1205 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1146

                                                                        
Query: 350  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1145 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1086

                                                   
Query: 410  taccatcctgtctaacttcctcttgaattcagggttctc 448
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 caccatcctgtctaacttcctcttgaattcagggttctc 1047



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 52   tgatgcagttcactgccactta 73
            ||||||||||||||||||||||
Sbjct: 1473 tgatgcagttcactgccactta 1452
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>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full
            insert sequence
          Length = 1533

 Score =  220 bits (111), Expect = 3e-54
 Identities = 192/219 (87%)
 Strand = Plus / Minus

                                                                        
Query: 230  tcagtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattggggg 289
            |||||||||||||| |||||| ||||| || |||||||| ||||||||||||||||||||
Sbjct: 1261 tcagtagacaagctggggctcgaattcagcgaaatcaacagagccagactcgattggggg 1202

                                                                        
Query: 290  catgaggtacgcagcgatgatctcagacactagttgggcaataagaggaaccctcttcag 349
            ||||||||||||||| |||||||||||||| ||   |||||   |||||| |||||||||
Sbjct: 1201 catgaggtacgcagcaatgatctcagacaccagagcggcaacgtgaggaatcctcttcag 1142

                                                                        
Query: 350  gttcttcaccaggggcaagtcgttggactctcctatagaaatgatcttcaggttgatatc 409
            ||||||||||||||| |  ||||  ||||| ||||| | |||||||||   |||||| ||
Sbjct: 1141 gttcttcaccagggggatatcgtcagactcgcctatggcaatgatctttttgttgatctc 1082

                                                   
Query: 410  taccatcctgtctaacttcctcttgaattcagggttctc 448
             ||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 caccatcctgtctaacttcctcttgaattcagggttctc 1043



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 52   tgatgcagttcactgccactta 73
            ||||||||||||||||||||||
Sbjct: 1469 tgatgcagttcactgccactta 1448
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>gb|AY108897.1| Zea mays PCO080076 mRNA sequence
          Length = 1774

 Score =  174 bits (88), Expect = 2e-40
 Identities = 175/204 (85%)
 Strand = Plus / Minus

                                                                        
Query: 245  gggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagc 304
            ||||||||||||||| |||||||| |||||||||||||| |||||||||||||| || ||
Sbjct: 1251 gggctcaaattcggcgaaatcaaccgagccagactcgatggggggcatgaggtaggcggc 1192

                                                                        
Query: 305  gatgatctcagacactagttgggcaataagaggaaccctcttcaggttcttcaccagggg 364
            ||||||||| ||||| ||   ||| | |||||||| |||||||||||||||||| |||||
Sbjct: 1191 gatgatctcggacaccagagaggcgacaagaggaatcctcttcaggttcttcactagggg 1132

                                                                        
Query: 365  caagtcgttggactctcctatagaaatgatcttcaggttgatatctaccatcctgtctaa 424
             |  |||| ||||||||| |  | |||||||||| ||||||| || ||||||||||| | 
Sbjct: 1131 gatttcgtcggactctccgacggcaatgatcttctggttgatctcaaccatcctgtcaag 1072

                                    
Query: 425  cttcctcttgaattcagggttctc 448
            |||||||||||| || ||||||||
Sbjct: 1071 cttcctcttgaactctgggttctc 1048
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>gb|BT013953.1| Lycopersicon esculentum clone 132976F, mRNA sequence
          Length = 1416

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 411  accatcctgtctaacttcctcttgaattcagggttctcaacatc 454
            ||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 1063 accatcctgtccaacttcctcttgaattctgggttctcaacatc 1020
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>gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds
          Length = 1323

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                    
Query: 411 accatcctgtctaacttcctcttgaattcagggttctcaac 451
           ||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 945 accatcctgtccaacttcctcttgaattctgggttctcaac 905
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>gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds
          Length = 1403

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 411  accatcctgtctaacttcctcttgaattcagggttctcaacatc 454
            ||||||||||| |||||||||||||| || ||||||||||||||
Sbjct: 1048 accatcctgtccaacttcctcttgaactccgggttctcaacatc 1005
to top
>ref|NM_115554.2| Arabidopsis thaliana transporter AT3G56950 mRNA, complete cds
          Length = 1481

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1222 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1281

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1282 agataagcagccaagatctcaga 1304



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                          
Query: 426  ttcctcttgaattcagggttctcaacatcc 455
            ||||||||||| ||||||||||||||||||
Sbjct: 1414 ttcctcttgaactcagggttctcaacatcc 1443
to top
>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940 (AT103)
            mRNA, complete cds
          Length = 1602

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1216

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1215 agataagcagccaagatctcaga 1193



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 426  ttcctcttgaattcagggttctcaacatcc 455
            ||||||||||| ||||||||||||||||||
Sbjct: 1083 ttcctcttgaactcagggttctcaacatcc 1054
to top
>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16
          Length = 107271

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 234   tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
             |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 94188 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 94129

                                    
Query: 294   aggtacgcagcgatgatctcaga 316
             || || ||||| | |||||||||
Sbjct: 94128 agataagcagccaagatctcaga 94106



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 426   ttcctcttgaattcagggttctcaacatcc 455
             ||||||||||| ||||||||||||||||||
Sbjct: 93996 ttcctcttgaactcagggttctcaacatcc 93967
to top
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3
          Length = 91303

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 6275 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 6216

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 6215 agataagcagccaagatctcaga 6193



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 426  ttcctcttgaattcagggttctcaacatcc 455
            ||||||||||| ||||||||||||||||||
Sbjct: 6083 ttcctcttgaactcagggttctcaacatcc 6054
to top
>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1)
            mRNA, complete cds
          Length = 1407

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1265 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1206

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1205 agataagcagccaagatctcaga 1183



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 426  ttcctcttgaattcagggttctcaacatcc 455
            ||||||||||| ||||||||||||||||||
Sbjct: 1073 ttcctcttgaactcagggttctcaacatcc 1044
to top
>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds
          Length = 1349

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  tagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggcatg 293
            |||||||| || |||||||| ||||| |||||||| ||||||||||| |  || ||||||
Sbjct: 1241 tagacaagattaggctcaaactcggcgaaatcaacagagccagactcaacaggaggcatg 1182

                                   
Query: 294  aggtacgcagcgatgatctcaga 316
            || || ||||| | |||||||||
Sbjct: 1181 agataagcagccaagatctcaga 1159



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 426  ttcctcttgaattcagggttctcaacatcc 455
            ||||||||||| ||||||||||||||||||
Sbjct: 1049 ttcctcttgaactcagggttctcaacatcc 1020
to top
>gb|AY322556.1| Brassica napus putative fatty acid desaturase BNZIP mRNA, partial
           cds
          Length = 924

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 411 accatcctgtctaacttcctcttgaattcagggttctcaacatcc 455
           ||||| || |||| |||||||||||| ||||||||||||||||||
Sbjct: 737 accattctatctagcttcctcttgaactcagggttctcaacatcc 693
to top
>gb|AF417577.1|AF417577 Euphorbia esula leucine zipper-containing protein gene, complete cds
          Length = 5083

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                         
Query: 411  accatcctgtctaacttcctcttgaattc 439
            |||||||||||||||||||||||||||||
Sbjct: 1797 accatcctgtctaacttcctcttgaattc 1825



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 411  accatcctgtctaacttcctcttgaattcagggtt 445
            ||||| ||||| ||||||||||||||||| |||||
Sbjct: 4560 accattctgtccaacttcctcttgaattccgggtt 4526



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 330  ataagaggaaccctcttcaggttcttcac 358
            ||||| ||||||||||||| |||||||||
Sbjct: 4641 ataagtggaaccctcttcaagttcttcac 4613
to top
>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence
          Length = 96930

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 411   accatcctgtctaacttcctcttgaattcagggttctcaacatc 454
             ||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 95761 accatcctgtccaacttcctcttgaactctgggttctctacatc 95718



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 232   agtagacaagcttgggctcaaattcggcaaaatcaacggagccagactcgattgggggca 291
             |||| ||||| || || ||||| || ||||||||||| || |||||||||||||| ||||
Sbjct: 95940 agtaaacaagttttggttcaaactctgcaaaatcaacagatccagactcgattggtggca 95881

              
Query: 292   t 292
             |
Sbjct: 95880 t 95880
to top
>gb|AY322555.1| Rosa davurica putative fatty acid desaturase RDZIP mRNA, partial
           cds
          Length = 999

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 426 ttcctcttgaattcagggttctcaacatcc 455
           ||||||||||| ||||||||||||||||||
Sbjct: 818 ttcctcttgaactcagggttctcaacatcc 789
to top
>gb|AY322554.1| Salix babylonica putative fatty acid desaturase SBZIP mRNA, partial
           cds
          Length = 999

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 426 ttcctcttgaattcagggttctcaacatcc 455
           ||||||||||| ||||||||||||||||||
Sbjct: 818 ttcctcttgaactcagggttctcaacatcc 789
to top
>gb|AY322553.1| Spinacia oleracea putative fatty acid desaturase SOZIP mRNA,
           partial cds
          Length = 903

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 426 ttcctcttgaattcagggttctcaacatcc 455
           ||||||||||| ||||||||||||||||||
Sbjct: 722 ttcctcttgaactcagggttctcaacatcc 693
to top
>gb|AY322552.1| Triticum aestivum putative fatty acid desaturase TAZIP mRNA,
           partial cds
          Length = 903

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 59/70 (84%)
 Strand = Plus / Minus

                                                                       
Query: 246 ggctcaaattcggcaaaatcaacggagccagactcgattgggggcatgaggtacgcagcg 305
           ||||| |||||||| |||||||| ||||||||||| |  || |||||||| || ||||| 
Sbjct: 902 ggctcgaattcggcgaaatcaacagagccagactcaacaggaggcatgagataagcagcc 843

                     
Query: 306 atgatctcag 315
           | ||||||||
Sbjct: 842 aagatctcag 833



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 426 ttcctcttgaattcagggttctcaacatcc 455
           ||||||||||| ||||||||||||||||||
Sbjct: 722 ttcctcttgaactcagggttctcaacatcc 693
to top
>gb|AC119987.13| Mus musculus chromosome 9, clone RP24-502H5, complete sequence
          Length = 173716

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 341   cctcttcaggttcttcaccaggg 363
             |||||||||||||||||||||||
Sbjct: 64529 cctcttcaggttcttcaccaggg 64551
to top
>gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, complete sequence
          Length = 198388

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 341   cctcttcaggttcttcaccaggg 363
             |||||||||||||||||||||||
Sbjct: 21035 cctcttcaggttcttcaccaggg 21013
to top
>gb|AC102136.6| Mus musculus chromosome 3, clone RP23-269G19, complete sequence
          Length = 186659

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 365    caagtcgttggactctcctatagaa 389
              ||||| |||||||||||||||||||
Sbjct: 148356 caagtagttggactctcctatagaa 148332
to top
>gb|AC158583.3| Mus musculus chromosome 3, clone RP24-318B11, complete sequence
          Length = 168986

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 365    caagtcgttggactctcctatagaa 389
              ||||| |||||||||||||||||||
Sbjct: 166280 caagtagttggactctcctatagaa 166256
to top
>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete
             sequence
          Length = 155911

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 377   ctctcctatagaaatgatctt 397
             |||||||||||||||||||||
Sbjct: 56233 ctctcctatagaaatgatctt 56253
to top
>gb|AC183613.3| Pan troglodytes BAC clone CH251-171F23 from chromosome 7, complete
           sequence
          Length = 180545

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 377 ctctcctatagaaatgatctt 397
           |||||||||||||||||||||
Sbjct: 425 ctctcctatagaaatgatctt 405
to top
>gb|AC093168.3| Homo sapiens BAC clone RP11-148M21 from 7, complete sequence
          Length = 148689

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 377   ctctcctatagaaatgatctt 397
             |||||||||||||||||||||
Sbjct: 98032 ctctcctatagaaatgatctt 98052
to top
>gb|AC141107.5| Medicago truncatula clone mth2-34a12, complete sequence
          Length = 142659

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 411   accatcctgtctaacttcctcttgaattcagggttctcaacatccggtacagc 463
             ||||||| ||| ||||| ||||| || || ||||||||||||||  |||||||
Sbjct: 20071 accatccggtccaactttctcttaaactctgggttctcaacatcaagtacagc 20123
to top
>dbj|AP000752.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-689N19, complete
              sequence
          Length = 194140

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 232    agtagacaagcttgggctcaaattc 256
              ||||||||||||||| |||||||||
Sbjct: 149100 agtagacaagcttggtctcaaattc 149076
to top
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 25      tccgaagcaaaaccggaacac 45
               |||||||||||||||||||||
Sbjct: 2107746 tccgaagcaaaaccggaacac 2107726
to top
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence
          Length = 200229

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 380   tcctatagaaatgatcttca 399
             ||||||||||||||||||||
Sbjct: 81049 tcctatagaaatgatcttca 81030
to top
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence
          Length = 165405

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 177    atgcatcattatgtttgtaa 196
              ||||||||||||||||||||
Sbjct: 100909 atgcatcattatgtttgtaa 100890
to top
>gb|AC102333.10| Mus musculus chromosome 18, clone RP24-542P12, complete sequence
          Length = 188821

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     acttcacatacacttctcca 24
             ||||||||||||||||||||
Sbjct: 38617 acttcacatacacttctcca 38598
to top
>ref|XM_549074.2| PREDICTED: Canis familiaris hypothetical LOC491954 (LOC491954), mRNA
          Length = 2952

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   tctccatccgaagcaaaacc 38
            ||||||||||||||||||||
Sbjct: 2090 tctccatccgaagcaaaacc 2109
to top
>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete
            sequence
          Length = 200595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  atgcatcattatgtttgtaa 196
            ||||||||||||||||||||
Sbjct: 1404 atgcatcattatgtttgtaa 1385
to top
>ref|XM_381007.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00831.1)
            partial mRNA
          Length = 2712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 327  gcaataagaggaaccctcttcagg 350
            ||||||||||||||| ||||||||
Sbjct: 2081 gcaataagaggaaccttcttcagg 2058
to top
>emb|AL109897.30|HSJ134M13 Human DNA sequence from clone RP1-134M13 on chromosome 6q13-14.3
             Contains the 3' end of the SUMO-1-specific protease
             (SUSP1) gene, the 5' end of the MYO6 gene for Myosin VI
             (DFNA22 KIAA0389) and one CpG island, complete sequence
          Length = 121764

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gagcatgatgcatcattatg 189
             ||||||||||||||||||||
Sbjct: 43566 gagcatgatgcatcattatg 43585
to top
>emb|AL049551.1|HS271N20 Human DNA sequence from clone RP1-271N20 on chromosome 6q11.1-12,
             complete sequence
          Length = 65237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   ctatagaaatgatcttcagg 401
             ||||||||||||||||||||
Sbjct: 58039 ctatagaaatgatcttcagg 58058
to top
>gb|AC161175.5| Mus musculus chromosome 18, clone RP23-2J13, complete sequence
          Length = 225231

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    acttcacatacacttctcca 24
            ||||||||||||||||||||
Sbjct: 3287 acttcacatacacttctcca 3268
to top
>gb|AC153138.3| Mus musculus BAC clone RP23-442K7 from chromosome 7, complete sequence
          Length = 206648

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    gtaaagataggcagagatga 212
              ||||||||||||||||||||
Sbjct: 141296 gtaaagataggcagagatga 141277
to top
>gb|AC154207.3| Mus musculus BAC clone RP24-377E1 from chromosome 13, complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tgtaaagataggcagagatg 211
             ||||||||||||||||||||
Sbjct: 95539 tgtaaagataggcagagatg 95520
to top
>gb|AC068722.6|AC068722 Homo sapiens chromosome 15 clone CTD-2306A12 map 15q21.1, complete
             sequence
          Length = 151924

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   agacaagcttgggctcaaat 254
             ||||||||||||||||||||
Sbjct: 64006 agacaagcttgggctcaaat 64025
to top
>dbj|AK111043.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B07, full
           insert sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 tttttcgacaaattcagtag 236
           ||||||||||||||||||||
Sbjct: 631 tttttcgacaaattcagtag 612
to top
>dbj|AP001825.4| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2537O9, complete
              sequences
          Length = 206624

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    ctctcctatagaaatgatct 396
              ||||||||||||||||||||
Sbjct: 158166 ctctcctatagaaatgatct 158147
to top
>emb|AL935126.18| Zebrafish DNA sequence from clone CH211-186J3, complete sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   atgatgcatcattatgtttg 193
             ||||||||||||||||||||
Sbjct: 72853 atgatgcatcattatgtttg 72872
to top
>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     attcggcaaaatcaacggag 272
               ||||||||||||||||||||
Sbjct: 3368423 attcggcaaaatcaacggag 3368442
to top
>gb|AC150903.2| Mus musculus BAC clone RP23-35B12 from chromosome 7, complete sequence
          Length = 217178

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    gtaaagataggcagagatga 212
              ||||||||||||||||||||
Sbjct: 162669 gtaaagataggcagagatga 162688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,691,353
Number of Sequences: 3902068
Number of extensions: 3691353
Number of successful extensions: 70588
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70441
Number of HSP's gapped (non-prelim): 138
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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