ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaet100g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_194623.1| Oryza sativa (japonica cultivar-group) putative... 64 4e-07
2gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
3gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, c... 64 4e-07
4gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, c... 64 4e-07
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
7dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
8dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
9dbj|AK072740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
10dbj|AK069308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
12gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 62 1e-06
13gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome... 62 1e-06
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
15dbj|AK068905.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
16gb|AY110291.1| Zea mays CL2555_1 mRNA sequence 54 4e-04
17gb|L14063.1|MZEOMT Zea mays O-methyltransferase mRNA, complete cds 54 4e-04
18ref|NM_194620.1| Oryza sativa (japonica cultivar-group) putative... 50 0.006
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
20dbj|AK069721.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
21gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.006
22emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa... 50 0.006
23emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa... 50 0.006
24gb|AY135331.1| Homo sapiens isolate MRPS31P4 mitochondrial ribos... 46 0.087
25emb|AL137058.8| Human DNA sequence from clone RP11-78J21 on chro... 46 0.087
26emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.087
27gb|AY107933.1| Zea mays PCO142167 mRNA sequence 44 0.35
28gb|AY431940.1| Aedes aegypti ASAP ID: 34837 conserved unknown mR... 42 1.4
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
30gb|AC141554.5| Homo sapiens 12 BAC RP11-488P21 (Roswell Park Can... 42 1.4
31dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
32dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
33gb|AC009842.9| Drosophila melanogaster clone BACR04C12, complete... 40 5.4
34emb|AL109741.19|HSDJ575N6 Human DNA sequence from clone RP4-575N... 40 5.4
35emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4,... 40 5.4
36emb|BX005005.19| Zebrafish DNA sequence from clone DKEY-70O15 in... 40 5.4
37emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in... 40 5.4
38gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome 40 5.4
39gb|AC008099.5| Drosophila melanogaster, chromosome 2L, region 25... 40 5.4
40dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
42dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
43gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, comple... 40 5.4
44emb|AL132862.1|CEY73F8A Caenorhabditis elegans YAC Y73F8A, compl... 40 5.4
45gb|AE003575.5| Drosophila melanogaster chromosome 2L, section 16... 40 5.4
46emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 i... 40 5.4
47emb|AL935051.8| Zebrafish DNA sequence from clone CH211-173A19 i... 40 5.4 
>ref|NM_194623.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase
            ZRP4 (OSJNBa0023I19.21), mRNA
          Length = 1101

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
            ||||||| ||| |||||||||||| |||| |  | ||||||||||||| |||||||||||
Sbjct: 1097 gggtaaacctcgatgattgatcgggcacctagcaccggggtgattttgtagtcactgaat 1038

                                                                
Query: 321  cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
            || ||| | | ||  ||||||||||| || | ||| ||||| |||| |||||
Sbjct: 1037 ccagcctctaagaaaatcttcttccattcatactcctctcgctcgatgccat 986
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                           
Query: 261     gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
               ||||||| ||| |||||||||||| |||| |  | ||||||||||||| |||||||||||
Sbjct: 1142275 gggtaaacctcgatgattgatcgggcacctagcaccggggtgattttgtagtcactgaat 1142334

                                                                   
Query: 321     cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
               || ||| | | ||  ||||||||||| || | ||| ||||| |||| |||||
Sbjct: 1142335 ccagcctctaagaaaatcttcttccattcatactcctctcgctcgatgccat 1142386



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                           
Query: 300     gtgattttgaagtcactgaatcctgccgccatgattatcttcttccactcctgctcatct 359
               ||||||||| ||||||||||||| ||| | | ||  ||||||||||| || ||||| |||
Sbjct: 1119246 gtgattttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctct 1119305

                            
Query: 360     cgttcgacgccat 372
               || |||| |||||
Sbjct: 1119306 cgctcgatgccat 1119318
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>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence
          Length = 145526

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                         
Query: 261   gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
             ||||||| ||| |||||||||||| |||| |  | ||||||||||||| |||||||||||
Sbjct: 26513 gggtaaacctcgatgattgatcgggcacctagcaccggggtgattttgtagtcactgaat 26572

                                                                 
Query: 321   cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
             || ||| | | ||  ||||||||||| || | ||| ||||| |||| |||||
Sbjct: 26573 ccagcctctaagaaaatcttcttccattcatactcctctcgctcgatgccat 26624



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                        
Query: 300  gtgattttgaagtcactgaatcctgccgccatgattatcttcttccactcctgctcatct 359
            ||||||||| ||||||||||||| ||| | | ||  ||||||||||| || ||||| |||
Sbjct: 3484 gtgattttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctct 3543

                         
Query: 360  cgttcgacgccat 372
            || |||| |||||
Sbjct: 3544 cgctcgatgccat 3556
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>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence
          Length = 157450

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                          
Query: 261    gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
              ||||||| ||| |||||||||||| |||| |  | ||||||||||||| |||||||||||
Sbjct: 139728 gggtaaacctcgatgattgatcgggcacctagcaccggggtgattttgtagtcactgaat 139787

                                                                  
Query: 321    cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
              || ||| | | ||  ||||||||||| || | ||| ||||| |||| |||||
Sbjct: 139788 ccagcctctaagaaaatcttcttccattcatactcctctcgctcgatgccat 139839



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                          
Query: 300    gtgattttgaagtcactgaatcctgccgccatgattatcttcttccactcctgctcatct 359
              ||||||||| ||||||||||||| ||| | | ||  ||||||||||| || ||||| |||
Sbjct: 116699 gtgattttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctct 116758

                           
Query: 360    cgttcgacgccat 372
              || |||| |||||
Sbjct: 116759 cgctcgatgccat 116771
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                           
Query: 261     gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
               ||||||| ||| |||||||||||| |||| |  | ||||||||||||| |||||||||||
Sbjct: 1142275 gggtaaacctcgatgattgatcgggcacctagcaccggggtgattttgtagtcactgaat 1142334

                                                                   
Query: 321     cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
               || ||| | | ||  ||||||||||| || | ||| ||||| |||| |||||
Sbjct: 1142335 ccagcctctaagaaaatcttcttccattcatactcctctcgctcgatgccat 1142386



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                           
Query: 300     gtgattttgaagtcactgaatcctgccgccatgattatcttcttccactcctgctcatct 359
               ||||||||| ||||||||||||| ||| | | ||  ||||||||||| || ||||| |||
Sbjct: 1119246 gtgattttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctct 1119305

                            
Query: 360     cgttcgacgccat 372
               || |||| |||||
Sbjct: 1119306 cgctcgatgccat 1119318
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                            
Query: 261      gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
                ||||||| ||||||||||||||| |||||||  | |||  |||||||| ||||||| |||
Sbjct: 10687831 gggtaaacctcaatgattgatcgaacacccagcaccggtatgattttgtagtcactaaat 10687890

                                                                    
Query: 321      cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
                || ||| ||| ||  ||||||||||| || ||||| || || |||| |||||
Sbjct: 10687891 ccagcctccaagaaaatcttcttccattcatgctcctcccgctcgatgccat 10687942
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>dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0057I13
          Length = 156330

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                          
Query: 261    gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
              ||||||| ||||||||||||||| |||||||  | |||  |||||||| ||||||| |||
Sbjct: 140143 gggtaaacctcaatgattgatcgaacacccagcaccggtatgattttgtagtcactaaat 140202

                                                                  
Query: 321    cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
              || ||| ||| ||  ||||||||||| || ||||| || || |||| |||||
Sbjct: 140203 ccagcctccaagaaaatcttcttccattcatgctcctcccgctcgatgccat 140254
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0085I16
          Length = 141701

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                         
Query: 261   gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
             ||||||| ||||||||||||||| |||||||  | |||  |||||||| ||||||| |||
Sbjct: 24449 gggtaaacctcaatgattgatcgaacacccagcaccggtatgattttgtagtcactaaat 24508

                                                                 
Query: 321   cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
             || ||| ||| ||  ||||||||||| || ||||| || || |||| |||||
Sbjct: 24509 ccagcctccaagaaaatcttcttccattcatgctcctcccgctcgatgccat 24560
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>dbj|AK072740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134H21, full
            insert sequence
          Length = 1466

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
            ||||||| ||||||||||||||| |||||||  | |||  |||||||| ||||||| |||
Sbjct: 1127 gggtaaacctcaatgattgatcgaacacccagcaccggtatgattttgtagtcactaaat 1068

                                                                
Query: 321  cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
            || ||| ||| ||  ||||||||||| || ||||| || || |||| |||||
Sbjct: 1067 ccagcctccaagaaaatcttcttccattcatgctcctcccgctcgatgccat 1016
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>dbj|AK069308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K03, full
            insert sequence
          Length = 1483

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Minus

                                                                        
Query: 261  gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
            ||||||| ||| |||||||||||| |||| |  | ||||||||||||| |||||||||||
Sbjct: 1133 gggtaaacctcgatgattgatcgggcacctagcaccggggtgattttgtagtcactgaat 1074

                                                                
Query: 321  cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
            || ||| | | ||  ||||||||||| || | ||| ||||| |||| |||||
Sbjct: 1073 ccagcctctaagaaaatcttcttccattcatactcctctcgctcgatgccat 1022
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 92/112 (82%)
 Strand = Plus / Plus

                                                                           
Query: 261     gggtaaagctcaatgattgatcggacacccaaaatcggggtgattttgaagtcactgaat 320
               ||||||| ||| |||||||||||| |||| |  | ||||||||||||| |||||||||||
Sbjct: 1142272 gggtaaacctcgatgattgatcgggcacctagcaccggggtgattttgtagtcactgaat 1142331

                                                                   
Query: 321     cctgccgccatgattatcttcttccactcctgctcatctcgttcgacgccat 372
               || ||| | | ||  ||||||||||| || | ||| ||||| |||| |||||
Sbjct: 1142332 ccagcctctaagaaaatcttcttccattcatactcctctcgctcgatgccat 1142383



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                           
Query: 300     gtgattttgaagtcactgaatcctgccgccatgattatcttcttccactcctgctcatct 359
               ||||||||| ||||||||||||| ||| | | ||  ||||||||||| || ||||| |||
Sbjct: 1119243 gtgattttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctct 1119302

                            
Query: 360     cgttcgacgccat 372
               || |||| |||||
Sbjct: 1119303 cgctcgatgccat 1119315
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>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
              complete sequence
          Length = 142068

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                          
Query: 338    cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcgaa 397
              |||||||||||| |||||||||| ||||| ||||||||  | ||||||||| | ||||||
Sbjct: 103631 cttcttccactcttgctcatctctttcgatgccattgaccaacatgatgtacatatcgaa 103690

                 
Query: 398    caa 400
              |||
Sbjct: 103691 caa 103693



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                          
Query: 338    cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcgaa 397
              |||||||||||| |||||||||| ||| | |||||||| || ||||||||| | ||||||
Sbjct: 100196 cttcttccactcttgctcatctctttcaatgccattgacgaacatgatgtacatatcgaa 100137

                 
Query: 398    caa 400
              |||
Sbjct: 100136 caa 100134
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>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
            complete sequence
          Length = 143073

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                        
Query: 338  cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcgaa 397
            |||||||||||| |||||||||| ||||| ||||||||  | ||||||||| | ||||||
Sbjct: 9388 cttcttccactcttgctcatctctttcgatgccattgaccaacatgatgtacatatcgaa 9447

               
Query: 398  caa 400
            |||
Sbjct: 9448 caa 9450



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 338  cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcgaa 397
            |||||||||||| |||||||||| ||| | |||||||| || ||||||||| | ||||||
Sbjct: 5953 cttcttccactcttgctcatctctttcaatgccattgacgaacatgatgtacatatcgaa 5894

               
Query: 398  caa 400
            |||
Sbjct: 5893 caa 5891
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 338      cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcgaa 397
                |||||||||||| |||||||||| ||||| ||||||||  | ||||||||| | ||||||
Sbjct: 25369027 cttcttccactcttgctcatctctttcgatgccattgaccaacatgatgtacatatcgaa 25369086

                   
Query: 398      caa 400
                |||
Sbjct: 25369087 caa 25369089



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 338      cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcgaa 397
                |||||||||||| |||||||||| ||| | |||||||| || ||||||||| | ||||||
Sbjct: 25365592 cttcttccactcttgctcatctctttcaatgccattgacgaacatgatgtacatatcgaa 25365533

                   
Query: 398      caa 400
                |||
Sbjct: 25365532 caa 25365530
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>dbj|AK068905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G03, full
            insert sequence
          Length = 1357

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                        
Query: 338  cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcgaa 397
            |||||||||||| |||||||||| ||| | |||||||| || ||||||||| | ||||||
Sbjct: 1037 cttcttccactcttgctcatctctttcaatgccattgacgaacatgatgtacatatcgaa 978

               
Query: 398  caa 400
            |||
Sbjct: 977  caa 975
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>gb|AY110291.1| Zea mays CL2555_1 mRNA sequence
          Length = 1319

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 343  tccactcctgctcatctcgttcgacgccattgaggagcatgat 385
            |||||||||||||||||||||| | |||||||| || ||||||
Sbjct: 1029 tccactcctgctcatctcgttccatgccattgatgaacatgat 987
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>gb|L14063.1|MZEOMT Zea mays O-methyltransferase mRNA, complete cds
          Length = 1268

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 343  tccactcctgctcatctcgttcgacgccattgaggagcatgat 385
            |||||||||||||||||||||| | |||||||| || ||||||
Sbjct: 1029 tccactcctgctcatctcgttccatgccattgatgaacatgat 987
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>ref|NM_194620.1| Oryza sativa (japonica cultivar-group) putative o-methyltransferase
            ZRP4 (OSJNBa0023I19.18), mRNA
          Length = 1101

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 300  gtgattttgaagtcactgaatcctgccgccatgattatcttcttccactcctgctcatct 359
            ||||||||| ||||||||||||| ||| | | ||  ||||||||||| || ||||| |||
Sbjct: 1058 gtgattttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctct 999

                         
Query: 360  cgttcgacgccat 372
            || |||| |||||
Sbjct: 998  cgctcgatgccat 986
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 339      ttcttccactcctgctcatctcgttcgacgccattga 375
                |||||||||||||| |||||||| || ||||||||||
Sbjct: 14794974 ttcttccactcctgttcatctcgctcaacgccattga 14795010



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                   
Query: 338      cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgta 388
                |||||||||||| ||||| ||||| || || |||||||  |||||||||||
Sbjct: 15055661 cttcttccactcttgctcgtctcgctccacaccattgataagcatgatgta 15055611



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                   
Query: 338      cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgta 388
                |||||||||||| | ||||||||| ||||| |||||||  ||||| |||||
Sbjct: 14758534 cttcttccactctttctcatctcgctcgacaccattgataagcatcatgta 14758584
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>dbj|AK069721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O22, full
           insert sequence
          Length = 1269

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                       
Query: 300 gtgattttgaagtcactgaatcctgccgccatgattatcttcttccactcctgctcatct 359
           ||||||||| ||||||||||||| ||| | | ||  ||||||||||| || ||||| |||
Sbjct: 960 gtgattttgtagtcactgaatccagcctctaagaaaatcttcttccattcatgctcctct 901

                        
Query: 360 cgttcgacgccat 372
           || |||| |||||
Sbjct: 900 cgctcgatgccat 888
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                     
Query: 339      ttcttccactcctgctcatctcgttcgacgccattga 375
                |||||||||||||| |||||||| || ||||||||||
Sbjct: 14749257 ttcttccactcctgttcatctcgctcaacgccattga 14749293



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                   
Query: 338      cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgta 388
                |||||||||||| ||||| ||||| || || |||||||  |||||||||||
Sbjct: 15009944 cttcttccactcttgctcgtctcgctccacaccattgataagcatgatgta 15009894



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                   
Query: 338      cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgta 388
                |||||||||||| | ||||||||| ||||| |||||||  ||||| |||||
Sbjct: 14712817 cttcttccactctttctcatctcgctcgacaccattgataagcatcatgta 14712867
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>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146519

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 339    ttcttccactcctgctcatctcgttcgacgccattga 375
              |||||||||||||| |||||||| || ||||||||||
Sbjct: 124912 ttcttccactcctgttcatctcgctcaacgccattga 124876
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>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 133207

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                  
Query: 339   ttcttccactcctgctcatctcgttcgacgccattga 375
             |||||||||||||| |||||||| || ||||||||||
Sbjct: 23826 ttcttccactcctgttcatctcgctcaacgccattga 23790



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 338   cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgta 388
             |||||||||||| | ||||||||| ||||| |||||||  ||||| |||||
Sbjct: 60266 cttcttccactctttctcatctcgctcgacaccattgataagcatcatgta 60216
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>gb|AY135331.1| Homo sapiens isolate MRPS31P4 mitochondrial ribosomal protein S31
            (MRPS31) pseudogene, nuclear pseudogene, partial sequence
          Length = 19889

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 121  tacttgtactaaaaacatttttt 143
            |||||||||||||||||||||||
Sbjct: 4801 tacttgtactaaaaacatttttt 4779
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>emb|AL137058.8| Human DNA sequence from clone RP11-78J21 on chromosome 13q32.2-33.3
              Contains 2 novel genes, a pseudogene similar to part of
              TPTE and PTEN homologous inositol lipid phosphatase (TPIP),
              a pseudogene similar to part of mitochondrial ribosomal
              protein S31 (MRPS31), the gene for a novel protein similar
              to heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) and
              3 CpG islands, complete sequence
          Length = 163390

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 121    tacttgtactaaaaacatttttt 143
              |||||||||||||||||||||||
Sbjct: 141231 tacttgtactaaaaacatttttt 141209
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>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 174521

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 338   cttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgta 388
             |||||||||||| ||||| ||||| || || |||||||  |||||||||||
Sbjct: 26186 cttcttccactcttgctcgtctcgctccacaccattgataagcatgatgta 26236
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>gb|AY107933.1| Zea mays PCO142167 mRNA sequence
          Length = 710

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 336 atcttcttccactcctgctcatctcgttcgacgccattgaggagcatgatgtaaagatcg 395
           ||||||||||||||  |||||||||| ||||| || ||||    ||||||||| ||||| 
Sbjct: 504 atcttcttccactctcgctcatctcgctcgacaccgttgatagtcatgatgtagagatca 445

                 
Query: 396 aacaag 401
           ||||||
Sbjct: 444 aacaag 439
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>gb|AY431940.1| Aedes aegypti ASAP ID: 34837 conserved unknown mRNA sequence
          Length = 1171

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 268 gctcaatgattgatcggacac 288
           |||||||||||||||||||||
Sbjct: 501 gctcaatgattgatcggacac 481
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 125      tgtactaaaaacattttttat 145
                |||||||||||||||||||||
Sbjct: 12757231 tgtactaaaaacattttttat 12757211
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>gb|AC141554.5| Homo sapiens 12 BAC RP11-488P21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 141736

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 372   ttgaggagcatgatgtaaaga 392
             |||||||||||||||||||||
Sbjct: 49649 ttgaggagcatgatgtaaaga 49629
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>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0710F09
          Length = 198867

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 125   tgtactaaaaacattttttat 145
             |||||||||||||||||||||
Sbjct: 15355 tgtactaaaaacattttttat 15335
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>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0492E07
          Length = 143794

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 125    tgtactaaaaacattttttat 145
              |||||||||||||||||||||
Sbjct: 131701 tgtactaaaaacattttttat 131681
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>gb|AC009842.9| Drosophila melanogaster clone BACR04C12, complete sequence
          Length = 163183

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   aatgattgatcggacaccca 291
             ||||||||||||||||||||
Sbjct: 25663 aatgattgatcggacaccca 25644
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>emb|AL109741.19|HSDJ575N6 Human DNA sequence from clone RP4-575N6 on chromosome 1p21.1-21.3
             Contains a novel gene, the EDG1 gene for endothelial
             differentiation sphingolipid G-protein-coupled receptor 1,
             a ribosomal protein S20 (RPS20) pseudogene, a
             peptidylprolyl isomerase A (cyclophilin A) (PPIA)
             pseudogene and the 5' end of a novel gene, complete
             sequence
          Length = 132438

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   cttccactcctgctcatctc 360
             ||||||||||||||||||||
Sbjct: 15182 cttccactcctgctcatctc 15163
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>emb|AL606694.3|OSJN00110 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0078D11,
             complete sequence
          Length = 115006

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   tgacatctcaagaaattggg 188
             ||||||||||||||||||||
Sbjct: 32052 tgacatctcaagaaattggg 32033
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>emb|BX005005.19| Zebrafish DNA sequence from clone DKEY-70O15 in linkage group 13,
             complete sequence
          Length = 153184

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   ctgttatcactatgacatct 176
             ||||||||||||||||||||
Sbjct: 91093 ctgttatcactatgacatct 91074
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>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5,
              complete sequence
          Length = 197143

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 31     taataacggaaatacaattttttg 54
              ||||||||| ||||||||||||||
Sbjct: 108439 taataacgggaatacaattttttg 108416
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>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome
          Length = 1176248

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    actaaaaacattttttatgg 147
              ||||||||||||||||||||
Sbjct: 770393 actaaaaacattttttatgg 770412
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>gb|AC008099.5| Drosophila melanogaster, chromosome 2L, region 25A-25A, BAC clone
              BACR37J18, complete sequence
          Length = 199916

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    aatgattgatcggacaccca 291
              ||||||||||||||||||||
Sbjct: 147685 aatgattgatcggacaccca 147666
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 169      tgacatctcaagaaattggg 188
                ||||||||||||||||||||
Sbjct: 28145615 tgacatctcaagaaattggg 28145596
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 192     ctgtgatagttggacggaaataaa 215
               |||||||||||||| |||||||||
Sbjct: 9731992 ctgtgatagttggaaggaaataaa 9732015
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>dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0033K18
          Length = 138487

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   ctgtgatagttggacggaaataaa 215
             |||||||||||||| |||||||||
Sbjct: 41063 ctgtgatagttggaaggaaataaa 41086
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>gb|AC154341.2| Mus musculus BAC clone RP23-240C2 from 16, complete sequence
          Length = 163871

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     tgatgggaaggaagggaggc 86
              ||||||||||||||||||||
Sbjct: 148154 tgatgggaaggaagggaggc 148173
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>emb|AL132862.1|CEY73F8A Caenorhabditis elegans YAC Y73F8A, complete sequence
          Length = 322774

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    tactaaaaacattttttatg 146
              ||||||||||||||||||||
Sbjct: 134290 tactaaaaacattttttatg 134271
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>gb|AE003575.5| Drosophila melanogaster chromosome 2L, section 16 of 83 of the
            complete sequence
          Length = 330399

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  aatgattgatcggacaccca 291
            ||||||||||||||||||||
Sbjct: 6377 aatgattgatcggacaccca 6396
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>emb|AL954769.9| Zebrafish DNA sequence from clone CH211-262A21 in linkage group 7,
             complete sequence
          Length = 145555

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 380   catgatgtaaagatcgaaca 399
             ||||||||||||||||||||
Sbjct: 71687 catgatgtaaagatcgaaca 71706
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>emb|AL935051.8| Zebrafish DNA sequence from clone CH211-173A19 in linkage group 5,
             complete sequence
          Length = 122151

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    taataacggaaatacaattttttg 54
             ||||||||| ||||||||||||||
Sbjct: 90403 taataacgggaatacaattttttg 90426


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,296,178
Number of Sequences: 3902068
Number of extensions: 4296178
Number of successful extensions: 105148
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104759
Number of HSP's gapped (non-prelim): 389
length of query: 403
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 381
effective length of database: 17,147,199,772
effective search space: 6533083113132
effective search space used: 6533083113132
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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